Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1559 107 2e-18 seq109 107 2e-18 >seq1559 Length=79761 Score = 107 bits (118), Expect = 2e-18 Identities = 227/336 (68%), Gaps = 2/336 (1%) Strand=Plus/Plus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || ||||| ||||| || | ||| | || | || || |||||||||||||| || || Sbjct 22968 AGTCCAGTGACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAACGGT 23027 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 || ||||| || | || |||| | |||||||| || ||||| ||||| || ||||| Sbjct 23028 ACGCCCAAGCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATCAGCA 23087 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416 || |||| || || |||| || ||||| || ||||| | | ||| | || Sbjct 23088 ACGAAAAACTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGAAGGA 23147 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476 ||||| || | ||||||||| | | ||||| ||||| ||||| | | || | | Sbjct 23148 TTCCAAGCGCTCATAATGATCCGACGATCGTAAGGATTGTTTTTCAATGTGTCGATCACC 23207 Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCAT-CCGCGTCCACGTACGCCGC 20535 | | ||| || || | || | || || || || | | | || ||||| || Sbjct 23208 TTTGCCAACTGATCGATTCCTTTCCCCGTGTAATCGTCGTGACATGT-TTTGTACGTTGC 23266 Query 20536 CCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCC 20571 |||||||| | |||||| |||||||| || ||||| Sbjct 23267 ACCAAAGTGACGCCACTGAAAACCGTACACCGGTCC 23302 >seq109 Length=460762 Score = 107 bits (118), Expect = 2e-18 Identities = 227/336 (68%), Gaps = 2/336 (1%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || ||||| ||||| || | ||| | || | || || |||||||||||||| || || Sbjct 284474 AGTCCAGTGACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAACGGT 284415 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 || ||||| || | || |||| | |||||||| || ||||| ||||| || ||||| Sbjct 284414 ACGCCCAAGCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATCAGCA 284355 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416 || |||| || || |||| || ||||| || ||||| | | ||| | || Sbjct 284354 ACGAAAAACTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGAAGGA 284295 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476 ||||| || | ||||||||| | | ||||| ||||| ||||| | | || | | Sbjct 284294 TTCCAAGCGCTCATAATGATCCGACGATCGTAAGGATTGTTTTTCAATGTGTCGATCACC 284235 Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCAT-CCGCGTCCACGTACGCCGC 20535 | | ||| || || | || | || || || || | | | || ||||| || Sbjct 284234 TTTGCCAACTGATCGATTCCTTTCCCCGTGTAATCGTCGTGACATGT-TTTGTACGTTGC 284176 Query 20536 CCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCC 20571 |||||||| | |||||| |||||||| || ||||| Sbjct 284175 ACCAAAGTGACGCCACTGAAAACCGTACACCGGTCC 284140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441093686875600