Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq1559 107 2e-18
seq109 107 2e-18
>seq1559
Length=79761
Score = 107 bits (118), Expect = 2e-18
Identities = 227/336 (68%), Gaps = 2/336 (1%)
Strand=Plus/Plus
Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296
|| ||||| ||||| || | ||| | || | || || |||||||||||||| || ||
Sbjct 22968 AGTCCAGTGACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAACGGT 23027
Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356
|| ||||| || | || |||| | |||||||| || ||||| ||||| || |||||
Sbjct 23028 ACGCCCAAGCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATCAGCA 23087
Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416
|| |||| || || |||| || ||||| || ||||| | | ||| | ||
Sbjct 23088 ACGAAAAACTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGAAGGA 23147
Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476
||||| || | ||||||||| | | ||||| ||||| ||||| | | || | |
Sbjct 23148 TTCCAAGCGCTCATAATGATCCGACGATCGTAAGGATTGTTTTTCAATGTGTCGATCACC 23207
Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCAT-CCGCGTCCACGTACGCCGC 20535
| | ||| || || | || | || || || || | | | || ||||| ||
Sbjct 23208 TTTGCCAACTGATCGATTCCTTTCCCCGTGTAATCGTCGTGACATGT-TTTGTACGTTGC 23266
Query 20536 CCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCC 20571
|||||||| | |||||| |||||||| || |||||
Sbjct 23267 ACCAAAGTGACGCCACTGAAAACCGTACACCGGTCC 23302
>seq109
Length=460762
Score = 107 bits (118), Expect = 2e-18
Identities = 227/336 (68%), Gaps = 2/336 (1%)
Strand=Plus/Minus
Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296
|| ||||| ||||| || | ||| | || | || || |||||||||||||| || ||
Sbjct 284474 AGTCCAGTGACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAACGGT 284415
Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356
|| ||||| || | || |||| | |||||||| || ||||| ||||| || |||||
Sbjct 284414 ACGCCCAAGCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATCAGCA 284355
Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416
|| |||| || || |||| || ||||| || ||||| | | ||| | ||
Sbjct 284354 ACGAAAAACTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGAAGGA 284295
Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476
||||| || | ||||||||| | | ||||| ||||| ||||| | | || | |
Sbjct 284294 TTCCAAGCGCTCATAATGATCCGACGATCGTAAGGATTGTTTTTCAATGTGTCGATCACC 284235
Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCAT-CCGCGTCCACGTACGCCGC 20535
| | ||| || || | || | || || || || | | | || ||||| ||
Sbjct 284234 TTTGCCAACTGATCGATTCCTTTCCCCGTGTAATCGTCGTGACATGT-TTTGTACGTTGC 284176
Query 20536 CCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCC 20571
|||||||| | |||||| |||||||| || |||||
Sbjct 284175 ACCAAAGTGACGCCACTGAAAACCGTACACCGGTCC 284140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441093686875600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |