Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq654 132 4e-26
seq1511 129 5e-25
seq561 105 5e-18
seq2250 89.7 4e-13
seq843 86.0 5e-12
seq701 86.0 5e-12
>seq654
Length=198528
Score = 132 bits (146), Expect = 4e-26
Identities = 211/297 (71%), Gaps = 8/297 (3%)
Strand=Plus/Plus
Query 37815 GAAAACGCCGACACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAG 37874
|||| ||| | |||||||| |||||||| |||| || | ||| | ||| |||
Sbjct 166797 GAAACGGCCAAAACGCACGACGATCTGTGGAACTCGGCACAGCTGCAGATGGTGAAGGAG 166856
Query 37875 GGTAAGATGCATCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGAT 37934
|||||||||||| || | || | ||||| ||| ||| || || |||| ||| | |
Sbjct 166857 GGTAAGATGCATGGGTTTTTGAGGATGTACTGGGCCAAAAAGATACTGGAGTGGACCAAA 166916
Query 37935 GATGCTCAGACC--GCGCT--CAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGA 37990
| || |||| ||||| |||| ||||| ||||| || ||| ||||||| ||||
Sbjct 166917 -ACGC-CAGAGGAAGCGCTTGCAACG--GCCATCTATCTGAACGATCGGTACAGCCTGGA 166972
Query 37991 CGGGCGTGATCCCAACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGCTACACGATAG 38050
|| || ||||| ||||| |||||||| || ||||||| || ||| | ||||||
Sbjct 166973 TGGACGCGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCCGGCATTCACGATCA 167032
Query 38051 AGCCTGGCGCGAGATTCCCATTTACGGCAAGATTCGGTACATGAACTACAACGGATG 38107
|| |||| ||| | |||| ||| |||||||||||||||||||| | |||||
Sbjct 167033 AGGCTGGAAGGAGCGTGAAATTTTCGGGAAGATTCGGTACATGAACTATGAGGGATG 167089
>seq1511
Length=84564
Score = 129 bits (142), Expect = 5e-25
Identities = 207/289 (72%), Gaps = 10/289 (3%)
Strand=Plus/Minus
Query 37815 GAAAACGCCGACACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAG 37874
|||| ||| | |||||||| |||||||| |||| || | ||| | ||| |||
Sbjct 80382 GAAACGGCCAAAACGCACGACGATCTGTGGAACTCGGCACAGCTGCAGATGGTGAAGGAG 80323
Query 37875 GGTAAGATGCATCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGAT 37934
|||||||||||| || | || | ||||| ||| ||| || || |||| ||| | |
Sbjct 80322 GGTAAGATGCATGGGTTTTTGAGGATGTACTGGGCCAAAAAGATACTGGAGTGGACCAAA 80263
Query 37935 GATGCTCAGACC--GCGCT--CAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGA 37990
| || |||| ||||| |||| ||||| ||||| || ||| ||||||| ||||
Sbjct 80262 -ACGC-CAGAGGAAGCGCTTGCAACG--GCCATCTATCTGAACGATCGGTACAGCCTGGA 80207
Query 37991 CGGGCGTGATCCCAACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGC-TACACGATA 38049
|| || ||||| ||||| |||||||| || ||||||| || || ||| | ||||||
Sbjct 80206 TGGACGCGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATC-GCAGGCATTCACGATC 80148
Query 38050 GAGCCTGGCGCGAGATTCCCATTTACGGCAAGATTCGGTACATGAACTA 38098
|| |||| ||| | |||| ||| ||||||||||||||||||||
Sbjct 80147 AAGGCTGGAAGGAGCGTGAAATTTTCGGGAAGATTCGGTACATGAACTA 80099
>seq561
Length=219668
Score = 105 bits (116), Expect = 5e-18
Identities = 166/239 (69%), Gaps = 18/239 (8%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || | ||| ||||| |||||||| || ||| |||||||||||||| || || | |
Sbjct 140034 CCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAC 139975
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| || | || ||||| |||||||||||||| ||||| |||||||||||| ||
Sbjct 139974 AGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGG 139915
Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA- 34079
| | || |||||| ||| | ||| ||||| | || | | ||| |
Sbjct 139914 ATTCCTTCCTTGTCCTGAATCT---------TGGCCTTCACATTCTCGATTGTGTCGGAT 139864
Query 34080 --TTCGACC------GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTT 34130
||||||| || || || |||||||| || || ||||||||||||||||||||
Sbjct 139863 GGTTCGACCTCAAGGGTGATGGTCTTTCCGGTCAGAGTCTTCACAAAGATTTGCATTTT 139805
Score = 93.3 bits (102), Expect = 3e-14
Identities = 89/114 (78%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || | ||| ||||| |||||||| || ||| |||||||||||||| || || | |
Sbjct 140490 CCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAC 140431
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014
| || | || |||||||||||||||||||| ||||| ||||||||||||
Sbjct 140430 AGGGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGATCC 140377
Score = 89.7 bits (98), Expect = 4e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || | ||| ||||| |||||||| || ||| |||||||||||||| || || | |
Sbjct 140262 CCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAC 140203
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014
| || | || ||||| |||||||||||||| ||||| ||||||||||||
Sbjct 140202 AGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCC 140149
>seq2250
Length=42400
Score = 89.7 bits (98), Expect = 4e-13
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969
|| ||||||||||||||||| ||| ||||||||||||||||| || | || ||
Sbjct 17055 AGTCGCAGCACCAGATGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGA 16996
Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013
| || |||| |||||||||||||| || || |||||||||||
Sbjct 16995 CCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATC 16952
>seq843
Length=160513
Score = 86.0 bits (94), Expect = 5e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || | ||| || |||||||| ||||| || ||||||||| |||||||| || | |
Sbjct 68837 CCACCGCGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 68896
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| || |||| |||| ||||| ||||| || ||||| ||||||||||| |||
Sbjct 68897 AGGGTGCGTCCGTCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGG 68956
Query 34021 ACGCTCTCTTTGTCC 34035
| || ||| ||||||
Sbjct 68957 ATGCCCTCCTTGTCC 68971
>seq701
Length=187196
Score = 86.0 bits (94), Expect = 5e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || | ||| || |||||||| ||||| || ||||||||| |||||||| || | |
Sbjct 176850 CCACCGCGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 176791
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| || |||| |||| ||||| ||||| || ||||| ||||||||||| |||
Sbjct 176790 AGGGTGCGTCCGTCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGG 176731
Query 34021 ACGCTCTCTTTGTCC 34035
| || ||| ||||||
Sbjct 176730 ATGCCCTCCTTGTCC 176716
Score = 86.0 bits (94), Expect = 5e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || | ||| || |||||||| ||||| || ||||||||| |||||||| || | |
Sbjct 183619 CCACCGCGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 183560
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| || |||| |||| ||||| ||||| || ||||| ||||||||||| |||
Sbjct 183559 AGGGTGCGTCCGTCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGG 183500
Query 34021 ACGCTCTCTTTGTCC 34035
| || ||| ||||||
Sbjct 183499 ATGCCCTCCTTGTCC 183485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396817584973180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |