Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq654 132 4e-26 seq1511 129 5e-25 seq561 105 5e-18 seq2250 89.7 4e-13 seq843 86.0 5e-12 seq701 86.0 5e-12 >seq654 Length=198528 Score = 132 bits (146), Expect = 4e-26 Identities = 211/297 (71%), Gaps = 8/297 (3%) Strand=Plus/Plus Query 37815 GAAAACGCCGACACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAG 37874 |||| ||| | |||||||| |||||||| |||| || | ||| | ||| ||| Sbjct 166797 GAAACGGCCAAAACGCACGACGATCTGTGGAACTCGGCACAGCTGCAGATGGTGAAGGAG 166856 Query 37875 GGTAAGATGCATCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGAT 37934 |||||||||||| || | || | ||||| ||| ||| || || |||| ||| | | Sbjct 166857 GGTAAGATGCATGGGTTTTTGAGGATGTACTGGGCCAAAAAGATACTGGAGTGGACCAAA 166916 Query 37935 GATGCTCAGACC--GCGCT--CAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGA 37990 | || |||| ||||| |||| ||||| ||||| || ||| ||||||| |||| Sbjct 166917 -ACGC-CAGAGGAAGCGCTTGCAACG--GCCATCTATCTGAACGATCGGTACAGCCTGGA 166972 Query 37991 CGGGCGTGATCCCAACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGCTACACGATAG 38050 || || ||||| ||||| |||||||| || ||||||| || ||| | |||||| Sbjct 166973 TGGACGCGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCCGGCATTCACGATCA 167032 Query 38051 AGCCTGGCGCGAGATTCCCATTTACGGCAAGATTCGGTACATGAACTACAACGGATG 38107 || |||| ||| | |||| ||| |||||||||||||||||||| | ||||| Sbjct 167033 AGGCTGGAAGGAGCGTGAAATTTTCGGGAAGATTCGGTACATGAACTATGAGGGATG 167089 >seq1511 Length=84564 Score = 129 bits (142), Expect = 5e-25 Identities = 207/289 (72%), Gaps = 10/289 (3%) Strand=Plus/Minus Query 37815 GAAAACGCCGACACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAG 37874 |||| ||| | |||||||| |||||||| |||| || | ||| | ||| ||| Sbjct 80382 GAAACGGCCAAAACGCACGACGATCTGTGGAACTCGGCACAGCTGCAGATGGTGAAGGAG 80323 Query 37875 GGTAAGATGCATCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGAT 37934 |||||||||||| || | || | ||||| ||| ||| || || |||| ||| | | Sbjct 80322 GGTAAGATGCATGGGTTTTTGAGGATGTACTGGGCCAAAAAGATACTGGAGTGGACCAAA 80263 Query 37935 GATGCTCAGACC--GCGCT--CAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGA 37990 | || |||| ||||| |||| ||||| ||||| || ||| ||||||| |||| Sbjct 80262 -ACGC-CAGAGGAAGCGCTTGCAACG--GCCATCTATCTGAACGATCGGTACAGCCTGGA 80207 Query 37991 CGGGCGTGATCCCAACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGC-TACACGATA 38049 || || ||||| ||||| |||||||| || ||||||| || || ||| | |||||| Sbjct 80206 TGGACGCGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATC-GCAGGCATTCACGATC 80148 Query 38050 GAGCCTGGCGCGAGATTCCCATTTACGGCAAGATTCGGTACATGAACTA 38098 || |||| ||| | |||| ||| |||||||||||||||||||| Sbjct 80147 AAGGCTGGAAGGAGCGTGAAATTTTCGGGAAGATTCGGTACATGAACTA 80099 >seq561 Length=219668 Score = 105 bits (116), Expect = 5e-18 Identities = 166/239 (69%), Gaps = 18/239 (8%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||| ||||| |||||||| || ||| |||||||||||||| || || | | Sbjct 140034 CCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAC 139975 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || ||||| |||||||||||||| ||||| |||||||||||| || Sbjct 139974 AGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGG 139915 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA- 34079 | | || |||||| ||| | ||| ||||| | || | | ||| | Sbjct 139914 ATTCCTTCCTTGTCCTGAATCT---------TGGCCTTCACATTCTCGATTGTGTCGGAT 139864 Query 34080 --TTCGACC------GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTT 34130 ||||||| || || || |||||||| || || |||||||||||||||||||| Sbjct 139863 GGTTCGACCTCAAGGGTGATGGTCTTTCCGGTCAGAGTCTTCACAAAGATTTGCATTTT 139805 Score = 93.3 bits (102), Expect = 3e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||| ||||| |||||||| || ||| |||||||||||||| || || | | Sbjct 140490 CCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAC 140431 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 | || | || |||||||||||||||||||| ||||| |||||||||||| Sbjct 140430 AGGGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGATCC 140377 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||| ||||| |||||||| || ||| |||||||||||||| || || | | Sbjct 140262 CCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAC 140203 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 | || | || ||||| |||||||||||||| ||||| |||||||||||| Sbjct 140202 AGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCC 140149 >seq2250 Length=42400 Score = 89.7 bits (98), Expect = 4e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || ||||||||||||||||| ||| ||||||||||||||||| || | || || Sbjct 17055 AGTCGCAGCACCAGATGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGA 16996 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 | || |||| |||||||||||||| || || ||||||||||| Sbjct 16995 CCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATC 16952 >seq843 Length=160513 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||| || |||||||| ||||| || ||||||||| |||||||| || | | Sbjct 68837 CCACCGCGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 68896 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || |||| |||| ||||| ||||| || ||||| ||||||||||| ||| Sbjct 68897 AGGGTGCGTCCGTCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGG 68956 Query 34021 ACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 68957 ATGCCCTCCTTGTCC 68971 >seq701 Length=187196 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||| || |||||||| ||||| || ||||||||| |||||||| || | | Sbjct 176850 CCACCGCGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 176791 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || |||| |||| ||||| ||||| || ||||| ||||||||||| ||| Sbjct 176790 AGGGTGCGTCCGTCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGG 176731 Query 34021 ACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 176730 ATGCCCTCCTTGTCC 176716 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||| || |||||||| ||||| || ||||||||| |||||||| || | | Sbjct 183619 CCACCGCGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 183560 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || |||| |||| ||||| ||||| || ||||| ||||||||||| ||| Sbjct 183559 AGGGTGCGTCCGTCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGG 183500 Query 34021 ACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 183499 ATGCCCTCCTTGTCC 183485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396817584973180