Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2250 145 8e-30 seq591 140 3e-28 seq368 140 3e-28 seq561 118 1e-21 seq98 95.1 1e-14 >seq2250 Length=42400 Score = 145 bits (160), Expect = 8e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | || ||||| ||||||| || ||||| || ||||||||||| || | Sbjct 17065 ACCACCGCGGAGTCGCAGCACCAGATGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGA 17006 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | ||||| ||||||||||||||| | ||||| |||||||| || ||||| Sbjct 17005 CAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGG 16946 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||||||||| || || || | | || ||||| ||| ||| | || || | || | Sbjct 16945 AATTCCTTCCTTATCCTGGA-TCTTGGCTTTCACATTCTCGATCGTGTCCGATGGCTCGA 16887 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || | || | ||||||||| || | ||||| |||||||| ||||| Sbjct 16886 CCTCGAGTGTGATGGTCTTGCCCGTGAGTGTTTTCACGAAAATCTGCAT 16838 >seq591 Length=212830 Score = 140 bits (154), Expect = 3e-28 Identities = 494/759 (65%), Gaps = 27/759 (4%) Strand=Plus/Minus Query 153671 TTTGTCCACGGTAAATGCGATTGCATCCGCGGCCGGTTTAGTTCGCAAATAATACATGCC 153730 ||||||||| ||||| ||| |||| | |||| || || ||||||||||| |||||||| Sbjct 137528 TTTGTCCACCGTAAACTGGATGGCATTCACGGCAGGCTTCGTTCGCAAATAGTACATGCC 137469 Query 153731 GGTTTTCAAACCACGTTTCCAAGTGTGCATGTGCACGCTAGTTAATAACGC-GAAACTGG 153789 ||||||| || |||||| || | ||| | | | | | || | | | | Sbjct 137468 TGTTTTCAGTCCCATTTTCCAGCCGTAAAAGTGGAT-CGACGTCAGCTTGCTGTAGTTCG 137410 Query 153790 GCTGCGCTATAAACACGTTAAACGACTGGCTCTGATCGATGAAAGCGCCGCGATCGGCCG 153849 | | || | | ||| ||||| || ||||||||| || || || |||||||| | Sbjct 137409 GTTCGGCCACGTGTATGTTGAACGATTGCGACTGATCGATAAACGCACCCCGATCGGCAG 137350 Query 153850 CCATGTCAAT-CAAGTTTTTACTGCTCATTTCCCACACAGTTTTGTAGACGGCTTTAATG 153908 |||| | || || ||||| || | || |||||||| |||||||||| | | || Sbjct 137349 CCATTTTGATGCATGTTTTAACCGAA-ATCTCCCACACCGTTTTGTAGAGGTCCCGTATT 137291 Query 153909 TCGTCGGGTATGCGAT-CAATTTTCTGCACACTGCCTCCGGCCGCTATAATGGA----AT 153963 || | ||||| |||| |||| |||| | || ||| ||| |||| || Sbjct 137290 TCCTGCGGTAT-CGATTCAATGCTCTGAA-------TCGAGCCATTAT--TGGACAAAAT 137241 Query 153964 TGCG-----CATGTGGTCGTCGTACAAATTTAGTCGACAT-AAATCTTCAACCAAGTGCT 154017 | || ||||| || ||| | | ||| | ||||||| | || ||| | Sbjct 137240 TTCGTTCTTCATGTCAAGATCCCACAGACCCA-TCGCTGTCAAATCTTGCAGCAGGTGAT 137182 Query 154018 GGTTAATTACTTGAAAATCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTGAACG 154077 |||| | ||| || || || |||| | ||| || || || | ||| ||| ||| Sbjct 137181 GGTTCACTACCTGGAACTCACCGGAAAGTACACGCCGATTGTAAACGTTGGACGTGTACG 137122 Query 154078 GCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACGCCA 154137 |||| || || |||||||| || ||||| || || || | || || ||||| |||| Sbjct 137121 GCTCAAAGGACTCGTTGTTACCCAATATCTGCGCCGTCGAGGCGGTCGGCATCGGTGCCA 137062 Query 154138 CCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCCCAATTCC 154197 || | || || || | |||||| |||||||| | ||| | || ||||| |||| Sbjct 137061 GCAGTAGCGAATTGCGGATACCGTGCTTTGCAATTTTCTCTTTCAGTTCGGCCCAGTTCC 137002 Query 154198 ACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTCGCCGGAC 154257 | | | || |||| ||||||||||||||| || || | || ||| |||||| Sbjct 137001 AAAGATCCGTCGGTTCTTTGTTCCACATGTCGTACTGTAAGATGCCTTTGCTCACCGGAC 136942 Query 154258 TGTCACTATAACTAGAGTACGGCCCGTTCAGTTTTGCCAAGTCGCAACTGGCTTCTAACG 154317 | | || | ||||||||||| | ||||| || || || ||||| | | Sbjct 136941 TACCTTCGTATGTTTCGTACGGCCCGTCACGGGCGGCCAACTCACAGCTCGCTTCCAGTG 136882 Query 154318 CCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGTCACTTTCGT 154377 | ||||||| | |||||| ||||| | || | | ||| ||||| |||||||||| Sbjct 136881 CGCCATAGTAGATGGTTTCAAATATTTGCTGATTCAGCTTTTGGGCTTCTTCACTTTCGT 136822 Query 154378 ACGGCAATCCCAATATACAAAAAGCATCGGCGA-GCCCT 154415 | || | | || || | || ||||| || | ||||| Sbjct 136821 ATGGATAGCGCATTAAAATGAATGCATCTGCCATGCCCT 136783 >seq368 Length=285863 Score = 140 bits (154), Expect = 3e-28 Identities = 494/759 (65%), Gaps = 27/759 (4%) Strand=Plus/Minus Query 153671 TTTGTCCACGGTAAATGCGATTGCATCCGCGGCCGGTTTAGTTCGCAAATAATACATGCC 153730 ||||||||| ||||| ||| |||| | |||| || || ||||||||||| |||||||| Sbjct 115390 TTTGTCCACCGTAAACTGGATGGCATTCACGGCAGGCTTCGTTCGCAAATAGTACATGCC 115331 Query 153731 GGTTTTCAAACCACGTTTCCAAGTGTGCATGTGCACGCTAGTTAATAACGC-GAAACTGG 153789 ||||||| || |||||| || | ||| | | | | | || | | | | Sbjct 115330 CGTTTTCAGTCCCATTTTCCAGCCGTAAAAGTGGAT-CGACGTCAGCTTGCTGTAGTTCG 115272 Query 153790 GCTGCGCTATAAACACGTTAAACGACTGGCTCTGATCGATGAAAGCGCCGCGATCGGCCG 153849 | | || | | ||| ||||| || ||||||||| || || || |||||||| | Sbjct 115271 GTTCGGCCACGTGTATGTTGAACGATTGCGACTGATCGATAAACGCACCCCGATCGGCAG 115212 Query 153850 CCATGTCAAT-CAAGTTTTTACTGCTCATTTCCCACACAGTTTTGTAGACGGCTTTAATG 153908 |||| | || || ||||| || | || |||||||| |||||||||| | | || Sbjct 115211 CCATTTTGATGCATGTTTTAACCGAA-ATCTCCCACACCGTTTTGTAGAGGTCCCGTATT 115153 Query 153909 TCGTCGGGTATGCGAT-CAATTTTCTGCACACTGCCTCCGGCCGCTATAATGGA----AT 153963 || | ||||| |||| |||| |||| | || ||| ||| |||| || Sbjct 115152 TCCTGCGGTAT-CGATTCAATGCTCTGAA-------TCGAGCCATTAT--TGGACAAAAT 115103 Query 153964 TGCG-----CATGTGGTCGTCGTACAAATTTAGTCGACAT-AAATCTTCAACCAAGTGCT 154017 | || ||||| || ||| | | ||| | ||||||| | || ||| | Sbjct 115102 TTCGTTCTTCATGTCAAGATCCCACAGACCCA-TCGCTGTCAAATCTTGCAGCAGGTGAT 115044 Query 154018 GGTTAATTACTTGAAAATCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTGAACG 154077 |||| | ||| || || || |||| | ||| || || || | ||| ||| ||| Sbjct 115043 GGTTCACTACCTGGAACTCACCGGAAAGTACACGCCGATTGTAAACGTTGGACGTGTACG 114984 Query 154078 GCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACGCCA 154137 |||| || || |||||||| || ||||| || || || | || || ||||| |||| Sbjct 114983 GCTCAAAGGACTCGTTGTTACCCAATATCTGCGCCGTCGAGGCGGTCGGCATCGGTGCCA 114924 Query 154138 CCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCCCAATTCC 154197 || | || || || | |||||| |||||||| | ||| | || ||||| |||| Sbjct 114923 GCAGTAGCGAATTGCGGATACCGTGCTTTGCAATTTTCTCTTTCAGTTCGGCCCAGTTCC 114864 Query 154198 ACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTCGCCGGAC 154257 | | | || |||| ||||||||||||||| || || | || ||| |||||| Sbjct 114863 AAAGATCCGTCGGTTCTTTGTTCCACATGTCGTACTGTAAGATGCCTTTGCTCACCGGAC 114804 Query 154258 TGTCACTATAACTAGAGTACGGCCCGTTCAGTTTTGCCAAGTCGCAACTGGCTTCTAACG 154317 | | || | ||||||||||| | ||||| || || || ||||| | | Sbjct 114803 TACCTTCGTATGTTTCGTACGGCCCGTCACGGGCGGCCAACTCACAGCTCGCTTCCAGTG 114744 Query 154318 CCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGTCACTTTCGT 154377 | ||||||| | |||||| ||||| | || | | ||| ||||| |||||||||| Sbjct 114743 CGCCATAGTAGATGGTTTCAAATATTTGCTGATTCAGCTTTTGGGCTTCTTCACTTTCGT 114684 Query 154378 ACGGCAATCCCAATATACAAAAAGCATCGGCGA-GCCCT 154415 | || | | || || | || ||||| || | ||||| Sbjct 114683 ATGGATAACGCATTAAAATGAATGCATCTGCCATGCCCT 114645 >seq561 Length=219668 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || ||||| || |||||||| || || | | |||||| | ||| Sbjct 140019 AGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCT 139960 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | ||||||||||||| | || || |||||||| || || || |||||||| || || Sbjct 139959 TCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCTTCCTTGTCC 139900 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| ||| | ||| || | || || || | || | |||| Sbjct 139899 TGAATCTTGGCCTTCACATTCTCGATTGTGTCGGATGGTTCGACCTCAAGGGTGATGGTC 139840 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || ||||||| ||| || || || ||||||||||| Sbjct 139839 TTTCCGGTCAGAGTCTTCACAAAGATTTGCATTTT 139805 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||| | || ||||| || |||||||| || || | | |||||| | ||||| Sbjct 140700 ACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCTTCC 140641 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 | ||||||||||||| | ||||| |||||||| || || || |||||||| || || || Sbjct 140640 AACTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGGGGGATTCCTTCCTTGTCCTGA 140581 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 || || ||| ||| ||| | || || | || || || | || | |||||| Sbjct 140580 ATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCAAGGGTGATGGTCTTT 140521 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||| || || ||||| || ||||| Sbjct 140520 CCGGTCAGTGTCTTGACGAAGATCTGCAT 140492 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || ||||| || |||||||| || || | | |||||| | ||| Sbjct 140247 AGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCT 140188 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | ||||||||||||| | || || |||||||| || || || |||||||| || || Sbjct 140187 TCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCTTCCTTGTCC 140128 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| ||| | || || | || || || | || | |||| Sbjct 140127 TGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCAAGGGTGATGGTC 140068 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || ||||||| || || ||||| || ||||| Sbjct 140067 TTTCCGGTCAGCGTCTTGACGAAGATCTGCAT 140036 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || ||||| || |||||||| || || | | |||||| | ||| Sbjct 140475 AGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCT 140416 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | |||||||||||| | || || |||||||| || || || |||||||| || || Sbjct 140415 TCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCTTCCTTGTCC 140356 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| ||| | || || | || || || | || | |||| Sbjct 140355 TGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCCAGGGTGATGGTC 140296 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || ||||||| ||| || ||||| || ||||| Sbjct 140295 TTTCCGGTCAGAGTCTTGACGAAGATCTGCAT 140264 >seq98 Length=483913 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||| | || ||| || | |||| ||||| || || ||||||||||| || | Sbjct 465634 CCCCCGCGAAGTCGAAGAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 465575 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || | || ||||||||||| ||||| | || | |||||||| || |||||| Sbjct 465574 AGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGA 465515 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| || ||| | || || || || || Sbjct 465514 ATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTCGACC 465455 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| |||| || || ||||| || ||||| Sbjct 465454 TCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 465408 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||| | || ||| || | |||| ||||| || || || |||||||| || | Sbjct 465172 CCCCCGCGAAGTCGAAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 465113 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || | || ||||||||||| ||||| | || | |||||||| || |||||| Sbjct 465112 AGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGA 465053 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| || ||| | || || || || || Sbjct 465052 ATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTCGACC 464993 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| |||| || || ||||| || ||||| Sbjct 464992 TCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 464946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499328837119600