Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_011335.1
Length=119343
Score E
Sequences producing significant alignments: (Bits) Value
seq2494 96.9 3e-15
seq799 96.9 3e-15
seq2161 86.0 5e-12
seq6970 84.2 2e-11
seq1105 84.2 2e-11
seq31995 82.4 6e-11
>seq2494
Length=33209
Score = 96.9 bits (106), Expect = 3e-15
Identities = 173/248 (70%), Gaps = 6/248 (2%)
Strand=Plus/Plus
Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399
|||||||| || || |||| |||||| || ||| | ||| |||| | ||||||||
Sbjct 16372 GCCGGGTTTGGGGTAACGGGCGGCGTACACCGGCTATGGTGCCACCGTTCGTACAAGGCG 16431
Query 108400 A--CCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCA 108457
| | |||| || | | ||||| | || | |||| | || || |||||||| |
Sbjct 16432 AAGCTACCCC--TCCGCATCATCCTGATGTGCTGTTACTCGATCGCCGGCCAGAACACGA 16489
Query 108458 TCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACAC-GACGGCCGAC 108516
|| | ||||| | ||||| | | || ||||||||||| || || ||||| ||
Sbjct 16490 TCTACGACTGGGTCCGGGATCATCGCATCCATCACAAGTACTCGGAAACGGACGG-TGAT 16548
Query 108517 CCACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAG 108576
||||||||||| ||| |||| ||| || | ||||||| || ||||| ||| | ||||
Sbjct 16549 CCACACAACGCGAACCGGGGCTTCCTGTACGCGCACGTCGGCTGGCTGATGCTTCGCAAG 16608
Query 108577 GACCCCGA 108584
|||| ||
Sbjct 16609 CACCCGGA 16616
>seq799
Length=167548
Score = 96.9 bits (106), Expect = 3e-15
Identities = 173/248 (70%), Gaps = 6/248 (2%)
Strand=Plus/Minus
Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399
|||||||| || || |||| |||||| || ||| | ||| |||| | ||||||||
Sbjct 29495 GCCGGGTTTGGGGTAACGGGCGGCGTACACCGGCTATGGTGCCACCGTTCGTACAAGGCG 29436
Query 108400 A--CCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCA 108457
| | |||| || | | ||||| | || | |||| | || || |||||||| |
Sbjct 29435 AAGCTACCCC--TCCGCATCATCCTGATGTGCTGTTACTCGATCGCCGGCCAGAACACGA 29378
Query 108458 TCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACG-ACGGCCGAC 108516
|| | ||||| | ||||| | | || ||||||||||| || ||| |||| ||
Sbjct 29377 TCTACGACTGGGTCCGGGATCATCGCATCCATCACAAGTACTCGGAAACGGACGGT-GAT 29319
Query 108517 CCACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAG 108576
||||||||||| ||| |||| ||| || | ||||||| || ||||| ||| | ||||
Sbjct 29318 CCACACAACGCGAACCGGGGCTTCCTGTACGCGCACGTCGGCTGGCTGATGCTTCGCAAG 29259
Query 108577 GACCCCGA 108584
|||| ||
Sbjct 29258 CACCCGGA 29251
>seq2161
Length=45365
Score = 86.0 bits (94), Expect = 5e-12
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 108871 GTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGAC 108930
||||| |||| || ||||||| |||||||||||||| || ||||||||||| | |||
Sbjct 37980 GTGGCTTCGTTCGCGTTCGGCGAAGGATGGCACAACTATCATCACGTGTTCCCGTGGGAC 37921
Query 108931 TACAAGGCCGCCGAGTTGGGGAACGAC 108957
|||||| | |||||| |||| ||| ||
Sbjct 37920 TACAAGACGGCCGAGCTGGGCAACTAC 37894
>seq6970
Length=2924
Score = 84.2 bits (92), Expect = 2e-11
Identities = 112/154 (73%), Gaps = 4/154 (3%)
Strand=Plus/Plus
Query 118599 ATATCCCTGCGCACGCGCGGGGTCGCCGTCGCGGTGCAAGCCAGTATCGGCACGCTCGGG 118658
|| ||| | || ||||| ||| | || ||||| || || | ||||||||| | |||
Sbjct 1225 ATGTCCATTCGTACGCGTGGGTTTGCGGTCGCTGTCAGCGCAATGATCGGCACGGTTGGG 1284
Query 118659 AAAATAGTTC--GAAGGACGGAGAGTTTTAGGTAGTCGGATCTAAAATCGTGCCCCCACT 118716
|| |||| | || ||||| || ||| |||||||| || |||||||||||||||
Sbjct 1285 AACT--GTTCCCGCAGCACGGAAAGCTTTTTGTAGTCGGGTCGAAAATCGTGCCCCCAGG 1342
Query 118717 CACAGACACAGTGTGCCTCGTCTATCACTATTCG 118750
| | |||||||| ||||| || ||||| || ||
Sbjct 1343 CGGACACACAGTGCGCCTCATCGATCACAATCCG 1376
>seq1105
Length=123761
Score = 84.2 bits (92), Expect = 2e-11
Identities = 112/154 (73%), Gaps = 4/154 (3%)
Strand=Plus/Minus
Query 118599 ATATCCCTGCGCACGCGCGGGGTCGCCGTCGCGGTGCAAGCCAGTATCGGCACGCTCGGG 118658
|| ||| | || ||||| ||| | || ||||| || || | ||||||||| | |||
Sbjct 85179 ATGTCCATTCGTACGCGTGGGTTTGCGGTCGCTGTCAGCGCAATGATCGGCACGGTTGGG 85120
Query 118659 AAAATAGTTC--GAAGGACGGAGAGTTTTAGGTAGTCGGATCTAAAATCGTGCCCCCACT 118716
|| |||| | || ||||| || ||| |||||||| || |||||||||||||||
Sbjct 85119 AACT--GTTCCCGCAGCACGGAAAGCTTTTTGTAGTCGGGTCGAAAATCGTGCCCCCAGG 85062
Query 118717 CACAGACACAGTGTGCCTCGTCTATCACTATTCG 118750
| | |||||||| ||||| || ||||| || ||
Sbjct 85061 CGGACACACAGTGCGCCTCATCGATCACAATCCG 85028
>seq31995
Length=260
Score = 82.4 bits (90), Expect = 6e-11
Identities = 66/80 (83%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 108871 GTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGAC 108930
||||| |||| || ||||||| |||||||||||||| || ||||||||||| | |||
Sbjct 180 GTGGCTTCGTTCGCGTTCGGCGAAGGATGGCACAACTATCATCACGTGTTCCCGTGGGAC 239
Query 108931 TACAAGGCCGCCGAGTTGGG 108950
|||||| | |||||| ||||
Sbjct 240 TACAAGACGGCCGAGCTGGG 259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381537412014960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |