Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq2494 96.9 3e-15 seq799 96.9 3e-15 seq2161 86.0 5e-12 seq6970 84.2 2e-11 seq1105 84.2 2e-11 seq31995 82.4 6e-11 >seq2494 Length=33209 Score = 96.9 bits (106), Expect = 3e-15 Identities = 173/248 (70%), Gaps = 6/248 (2%) Strand=Plus/Plus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 |||||||| || || |||| |||||| || ||| | ||| |||| | |||||||| Sbjct 16372 GCCGGGTTTGGGGTAACGGGCGGCGTACACCGGCTATGGTGCCACCGTTCGTACAAGGCG 16431 Query 108400 A--CCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCA 108457 | | |||| || | | ||||| | || | |||| | || || |||||||| | Sbjct 16432 AAGCTACCCC--TCCGCATCATCCTGATGTGCTGTTACTCGATCGCCGGCCAGAACACGA 16489 Query 108458 TCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACAC-GACGGCCGAC 108516 || | ||||| | ||||| | | || ||||||||||| || || ||||| || Sbjct 16490 TCTACGACTGGGTCCGGGATCATCGCATCCATCACAAGTACTCGGAAACGGACGG-TGAT 16548 Query 108517 CCACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAG 108576 ||||||||||| ||| |||| ||| || | ||||||| || ||||| ||| | |||| Sbjct 16549 CCACACAACGCGAACCGGGGCTTCCTGTACGCGCACGTCGGCTGGCTGATGCTTCGCAAG 16608 Query 108577 GACCCCGA 108584 |||| || Sbjct 16609 CACCCGGA 16616 >seq799 Length=167548 Score = 96.9 bits (106), Expect = 3e-15 Identities = 173/248 (70%), Gaps = 6/248 (2%) Strand=Plus/Minus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 |||||||| || || |||| |||||| || ||| | ||| |||| | |||||||| Sbjct 29495 GCCGGGTTTGGGGTAACGGGCGGCGTACACCGGCTATGGTGCCACCGTTCGTACAAGGCG 29436 Query 108400 A--CCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCA 108457 | | |||| || | | ||||| | || | |||| | || || |||||||| | Sbjct 29435 AAGCTACCCC--TCCGCATCATCCTGATGTGCTGTTACTCGATCGCCGGCCAGAACACGA 29378 Query 108458 TCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACG-ACGGCCGAC 108516 || | ||||| | ||||| | | || ||||||||||| || ||| |||| || Sbjct 29377 TCTACGACTGGGTCCGGGATCATCGCATCCATCACAAGTACTCGGAAACGGACGGT-GAT 29319 Query 108517 CCACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAG 108576 ||||||||||| ||| |||| ||| || | ||||||| || ||||| ||| | |||| Sbjct 29318 CCACACAACGCGAACCGGGGCTTCCTGTACGCGCACGTCGGCTGGCTGATGCTTCGCAAG 29259 Query 108577 GACCCCGA 108584 |||| || Sbjct 29258 CACCCGGA 29251 >seq2161 Length=45365 Score = 86.0 bits (94), Expect = 5e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 108871 GTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGAC 108930 ||||| |||| || ||||||| |||||||||||||| || ||||||||||| | ||| Sbjct 37980 GTGGCTTCGTTCGCGTTCGGCGAAGGATGGCACAACTATCATCACGTGTTCCCGTGGGAC 37921 Query 108931 TACAAGGCCGCCGAGTTGGGGAACGAC 108957 |||||| | |||||| |||| ||| || Sbjct 37920 TACAAGACGGCCGAGCTGGGCAACTAC 37894 >seq6970 Length=2924 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/154 (73%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 118599 ATATCCCTGCGCACGCGCGGGGTCGCCGTCGCGGTGCAAGCCAGTATCGGCACGCTCGGG 118658 || ||| | || ||||| ||| | || ||||| || || | ||||||||| | ||| Sbjct 1225 ATGTCCATTCGTACGCGTGGGTTTGCGGTCGCTGTCAGCGCAATGATCGGCACGGTTGGG 1284 Query 118659 AAAATAGTTC--GAAGGACGGAGAGTTTTAGGTAGTCGGATCTAAAATCGTGCCCCCACT 118716 || |||| | || ||||| || ||| |||||||| || ||||||||||||||| Sbjct 1285 AACT--GTTCCCGCAGCACGGAAAGCTTTTTGTAGTCGGGTCGAAAATCGTGCCCCCAGG 1342 Query 118717 CACAGACACAGTGTGCCTCGTCTATCACTATTCG 118750 | | |||||||| ||||| || ||||| || || Sbjct 1343 CGGACACACAGTGCGCCTCATCGATCACAATCCG 1376 >seq1105 Length=123761 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/154 (73%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 118599 ATATCCCTGCGCACGCGCGGGGTCGCCGTCGCGGTGCAAGCCAGTATCGGCACGCTCGGG 118658 || ||| | || ||||| ||| | || ||||| || || | ||||||||| | ||| Sbjct 85179 ATGTCCATTCGTACGCGTGGGTTTGCGGTCGCTGTCAGCGCAATGATCGGCACGGTTGGG 85120 Query 118659 AAAATAGTTC--GAAGGACGGAGAGTTTTAGGTAGTCGGATCTAAAATCGTGCCCCCACT 118716 || |||| | || ||||| || ||| |||||||| || ||||||||||||||| Sbjct 85119 AACT--GTTCCCGCAGCACGGAAAGCTTTTTGTAGTCGGGTCGAAAATCGTGCCCCCAGG 85062 Query 118717 CACAGACACAGTGTGCCTCGTCTATCACTATTCG 118750 | | |||||||| ||||| || ||||| || || Sbjct 85061 CGGACACACAGTGCGCCTCATCGATCACAATCCG 85028 >seq31995 Length=260 Score = 82.4 bits (90), Expect = 6e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 108871 GTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGAC 108930 ||||| |||| || ||||||| |||||||||||||| || ||||||||||| | ||| Sbjct 180 GTGGCTTCGTTCGCGTTCGGCGAAGGATGGCACAACTATCATCACGTGTTCCCGTGGGAC 239 Query 108931 TACAAGGCCGCCGAGTTGGG 108950 |||||| | |||||| |||| Sbjct 240 TACAAGACGGCCGAGCTGGG 259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381537412014960