Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq591 196 8e-45 seq368 196 8e-45 seq569 145 1e-29 seq1541 100 5e-16 >seq591 Length=212830 Score = 196 bits (216), Expect = 8e-45 Identities = 416/611 (68%), Gaps = 10/611 (2%) Strand=Plus/Minus Query 203833 CTTCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTA 203892 |||||| ||||||||||| ||||| ||||| |||||||||||| | ||| || |||||| Sbjct 137534 CTTCGTTTTGTCCACCGTAAACTGGATGGCATTCACGGCAGGCTTCGTTCGCAAATAGTA 137475 Query 203893 CATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC 203952 |||||| || || || ||| | | ||| ||||| | ||| || || | ||| ||||| Sbjct 137474 CATGCCTGTTTTCAGTCCCATTTTCCAGCCGTAAAAGTGGATCGACGTCAGCTTGCTGTA 137415 Query 203953 GTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATC 204012 ||| || ||||||| ||| ||||| | || || || ||||| || | ||||||| Sbjct 137414 GTTCGGTTCGGCCACGTGTATGTTGAACGATTGCGACTGATCGATAAACGCACCCCGATC 137355 Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCT 204072 || ||||| ||||| || || |||||||||||||||||| ||| | | ||| | Sbjct 137354 GGCAGCCATTTTGATGCATGTTTTAACCGAAATCTCCCACACCGTTTTGTAGAGGTCCCG 137295 Query 204073 GGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCA 204131 | | || || | || | | | ||| |||||||| || | || || | | Sbjct 137294 TATTTCCTGCGGTATCGATT-CAATGCTCTGAATCGAGCCATTATTGGACAAAATTTCGT 137236 Query 204132 TCCTCGTCTCCTCCCCCCACATGCCCAAC-CTGATCAGCTCCCGCACCAGGTGGGGGTTG 204190 || || | || |||||| |||| | ||| ||| || ||| |||||| |||| Sbjct 137235 TCTTCATGTCAAGATCCCACAGACCCATCGCTG-TCAAATCTTGCAGCAGGTGATGGTTC 137177 Query 204191 ATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCG 204250 | | ||| || || ||||| || || | || || | | |||| ||| | || || Sbjct 137176 ACTACCTGGAACTCACCGGAAAGTACACGCCGATTGTAAACGTTGGACGTGTACGGCTCA 137117 Query 204251 AACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGC 204310 || | ||||||||| || || ||||| || || ||| || ||||| || ||||| || Sbjct 137116 AAGGACTCGTTGTTACCCAATATCTGCGCCGTCGAGGCGGTCGGCATCGGTGCCAGCAGT 137057 Query 204311 AGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGC-TTCAGAGAGGTCCAGTCGTGCAT 204369 || || ||||| | ||||| |||| | | | | ||||| || ||||| | || Sbjct 137056 AGCGAATTGCGGATACCGT-GCTTTGCAATTTTCTCTTTCAGTTCGGCCCAGT--TCCAA 137000 Query 204370 CG--CACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTG 204427 | | | |||| | |||||||||| |||| |||||||||| || || || || Sbjct 136999 AGATCCGTCGGTTCTTTGTTCCACATGTCGTACTGTAAGATGCCTTTGCTCACCGGACTA 136940 Query 204428 CCCTTGTACGT 204438 || | ||| || Sbjct 136939 CCTTCGTATGT 136929 Score = 87.8 bits (96), Expect = 3e-12 Identities = 336/518 (65%), Gaps = 16/518 (3%) Strand=Plus/Minus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 |||||| || ||||| || | ||| ||||| | || | | |||||| || Sbjct 136568 CTCCACAATTTCGGTACAAAGATTAGAACACTTGATGGTGCCAATGTTCTGCTGATTGCT 136509 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TC 205001 ||| |||||||| | ||||||||||| ||| |||||| || | |||| ||| || || Sbjct 136508 CTTACGGTTACATGCGTCCTTGTACAGTATGTACGGCACACCTGTTTCCACCTGCGACTC 136449 Query 205002 GCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATC--CCTTGAGA 205059 || || ||||| || || |||| ||| || || || ||| || | Sbjct 136448 AATGATTG-AAAACCACAGATCCCGTGCCTTCACCTG--TCGTATAAATCGGCCCTCCTT 136392 Query 205060 CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGC----CCTG 205115 |||||| | ||||||||| | | || || ||| || || |||||| || | Sbjct 136391 CTCGTAGCTAGTGTACAGCTTCTCGAACTCCTCACC--CCAGGT--ATCAGCCAGTCCGG 136336 Query 205116 GACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACA 205175 |||| | | |||||||| || |||||| | || | | ||||| ||| |||| Sbjct 136335 GACAGTCGTGCGGACACATTAGGCTCCACATTTCATTCGCCTCCACCCGAGTCATGAACA 136276 Query 205176 GGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGT 205235 |||| |||||||||| |||| |||| ||| || || | | | || | || | Sbjct 136275 GGTCCGGGATCCACAGGGCGTAGAACATATCTCGAGCTCGCACCTCCTCCTTGCCGGTAT 136216 Query 205236 TCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCC 205294 | || |||| ||||| || || | || || | ||||| || || | | | ||| Sbjct 136215 TTTTCTTCAGATCCAG-AAACTCGAATATATCCCCATGCCATGGTTCGAGGTAGATGGCA 136157 Query 205295 ATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACT 205354 | || || |||| ||||| |||||||| ||||| || | | | |||| |||| Sbjct 136156 AAGGCTCCGGGCCGTTTGTTGCCACCCTGATCCACGTACCGTGCCGTATTGTTGTAAACG 136097 Query 205355 CGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGT 205392 |||| ||| ||||||| ||||| | |||| ||||| Sbjct 136096 CGCAACATTGGCACCAACCCGTTCGAAATCCCATTCGT 136059 >seq368 Length=285863 Score = 196 bits (216), Expect = 8e-45 Identities = 416/611 (68%), Gaps = 10/611 (2%) Strand=Plus/Minus Query 203833 CTTCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTA 203892 |||||| ||||||||||| ||||| ||||| |||||||||||| | ||| || |||||| Sbjct 115396 CTTCGTTTTGTCCACCGTAAACTGGATGGCATTCACGGCAGGCTTCGTTCGCAAATAGTA 115337 Query 203893 CATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC 203952 |||||| || || || ||| | | ||| ||||| | ||| || || | ||| ||||| Sbjct 115336 CATGCCCGTTTTCAGTCCCATTTTCCAGCCGTAAAAGTGGATCGACGTCAGCTTGCTGTA 115277 Query 203953 GTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATC 204012 ||| || ||||||| ||| ||||| | || || || ||||| || | ||||||| Sbjct 115276 GTTCGGTTCGGCCACGTGTATGTTGAACGATTGCGACTGATCGATAAACGCACCCCGATC 115217 Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCT 204072 || ||||| ||||| || || |||||||||||||||||| ||| | | ||| | Sbjct 115216 GGCAGCCATTTTGATGCATGTTTTAACCGAAATCTCCCACACCGTTTTGTAGAGGTCCCG 115157 Query 204073 GGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCA 204131 | | || || | || | | | ||| |||||||| || | || || | | Sbjct 115156 TATTTCCTGCGGTATCGATT-CAATGCTCTGAATCGAGCCATTATTGGACAAAATTTCGT 115098 Query 204132 TCCTCGTCTCCTCCCCCCACATGCCCAAC-CTGATCAGCTCCCGCACCAGGTGGGGGTTG 204190 || || | || |||||| |||| | ||| ||| || ||| |||||| |||| Sbjct 115097 TCTTCATGTCAAGATCCCACAGACCCATCGCTG-TCAAATCTTGCAGCAGGTGATGGTTC 115039 Query 204191 ATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCG 204250 | | ||| || || ||||| || || | || || | | |||| ||| | || || Sbjct 115038 ACTACCTGGAACTCACCGGAAAGTACACGCCGATTGTAAACGTTGGACGTGTACGGCTCA 114979 Query 204251 AACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGC 204310 || | ||||||||| || || ||||| || || ||| || ||||| || ||||| || Sbjct 114978 AAGGACTCGTTGTTACCCAATATCTGCGCCGTCGAGGCGGTCGGCATCGGTGCCAGCAGT 114919 Query 204311 AGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGC-TTCAGAGAGGTCCAGTCGTGCAT 204369 || || ||||| | ||||| |||| | | | | ||||| || ||||| | || Sbjct 114918 AGCGAATTGCGGATACCGT-GCTTTGCAATTTTCTCTTTCAGTTCGGCCCAGT--TCCAA 114862 Query 204370 CG--CACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTG 204427 | | | |||| | |||||||||| |||| |||||||||| || || || || Sbjct 114861 AGATCCGTCGGTTCTTTGTTCCACATGTCGTACTGTAAGATGCCTTTGCTCACCGGACTA 114802 Query 204428 CCCTTGTACGT 204438 || | ||| || Sbjct 114801 CCTTCGTATGT 114791 Score = 84.2 bits (92), Expect = 3e-11 Identities = 335/518 (65%), Gaps = 16/518 (3%) Strand=Plus/Minus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 |||||| || ||||| || | ||| ||||| | || | | |||||| || Sbjct 114436 CTCCACAATTTCGGTACAAAGATTAGAACACTTGATGGTGCCAATGTTCTGCTGATTGCT 114377 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TC 205001 ||| |||||||| | ||||||||||| ||| |||||| || | |||| ||| || || Sbjct 114376 CTTACGGTTACATGCGTCCTTGTACAGTATGTACGGCACACCTGTTTCCACCTGCGACTC 114317 Query 205002 GCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATC--CCTTGAGA 205059 || || ||||| || || |||| ||| || || || ||| || | Sbjct 114316 AATGATTG-AAAACCACAGATCCCGTGCCTTCACCTG--TCGTATAAATCGGCCCTCCTT 114260 Query 205060 CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGC----CCTG 205115 |||||| | ||||||||| | | || || ||| || || |||||| || | Sbjct 114259 CTCGTAGCTAGTGTACAGCTTCTCGAACTCCTCACC--CCAGGT--ATCAGCCAGTCCAG 114204 Query 205116 GACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACA 205175 |||| | | || ||||| || |||||| | || | | ||||| ||| |||| Sbjct 114203 GACAGTCGTGCGGGCACATTAGGCTCCACATTTCATTCGCCTCCACCCGAGTCATGAACA 114144 Query 205176 GGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGT 205235 |||| |||||||||| |||| |||| || || || | | | || | || | Sbjct 114143 GGTCCGGGATCCACAGGGCGTAGAACATGTCTCGTGCTCGCACCTCCTCCTTGCCGGTAT 114084 Query 205236 TCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCC 205294 | || |||| ||||| || || | || || | ||||| || || | | | ||| Sbjct 114083 TTTTCTTCAGATCCAG-AAACTCGAATATATCCCCATGCCATGGTTCGAGGTAGATGGCA 114025 Query 205295 ATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACT 205354 | || || |||| ||||| |||||||| ||||| || | | | |||| |||| Sbjct 114024 AAGGCTCCGGGCCGTTTGTTGCCACCCTGATCCACGTACCGTGCCGTATTGTTGTAAACG 113965 Query 205355 CGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGT 205392 |||||||| ||||||| ||||| | |||| ||||| Sbjct 113964 CGCAGCATTGGCACCAACCCGTTCGAAATCCCATTCGT 113927 >seq569 Length=217393 Score = 145 bits (160), Expect = 1e-29 Identities = 288/423 (68%), Gaps = 5/423 (1%) Strand=Plus/Minus Query 159745 CAGCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAG 159804 |||||| | || |||||||| || ||||| ||||| | || ||||| || || || Sbjct 206572 CAGCAAACGATCGGCCACAAACTCAATGTACTGGGACATCAGTTCGCAGTTCATGCCGAG 206513 Query 159805 CAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCAC 159864 || || || || |||| || || ||| || | ||| ||| | ||||| || | Sbjct 206512 CATATCCACCGGCAGGGCTTTCGTCAAAAATTCTTGCTCGATCACTACCGCATCACGGAT 206453 Query 159865 AATCTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCA 159924 |||| || || || || | | |||||| || | | | | | |||| ||||| Sbjct 206452 GATCTCCGTCACGCGCTCCTTCGACGGCTTCTGCACCA---GATACCTGAACATTAGGCA 206396 Query 159925 CGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCC 159984 ||| || ||||| |||| ||||||||| || || || | |||||| || | | || || Sbjct 206395 CGCGAAATCGCAATGCAATCCCTCGTCGCGCGAAATCAGCTCGTTCGAGAACGTCAGCCC 206336 Query 159985 CGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGAT 160044 ||||| | || ||| || ||||| ||||||| |||||| |||||| || ||||| Sbjct 206335 GGGCATCAGGCCTCGCTTCTTCAGCCAGAAAATGGACGCAAAGCTACCGCTGAAGAAGAT 206276 Query 160045 CCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGT 160104 ||||| |||||||||||||| || | | || ||||| ||| || || | | Sbjct 206275 ACCCTCGACGGCCGCAAACGCGACCACACGTTCGCCAAAGTTGGCCTTCTTGCTCGAGAT 206216 Query 160105 CCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCG-CTCGACGGCGTTAA 160163 ||| | |||||| ||||||||||| | |||||| | ||| |||| ||| || | Sbjct 206215 CCAGTTAAGGGCCCAGTCAGCCTTCTTCTTCACGCACGGTA-GCGTTTCGATGGCATTGA 206157 Query 160164 ACA 160166 ||| Sbjct 206156 ACA 206154 Score = 100 bits (110), Expect = 5e-16 Identities = 128/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 160199 GTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTG 160258 ||| | |||||| ||||||||| || ||||||||||| || || ||||||||| | Sbjct 206051 GTATCGATCAGCAGCGAGTACATCTCGCTATGCACATTTTCCATCGCAATCTGAAAGCCG 205992 Query 160259 TAGAAATATGTCGCCTCCAGATAC-TGCACCTCCTGTGTGAACCTTTGACCCAGATTGGC 160317 ||||| | |||||| | ||| ||||| ||||| |||| | || ||||||| | Sbjct 205991 TAGAAGCAGCGTGCCTCC-GTTACCTGCACTTCCTGGCTGAAGCGTTCCACCAGATTTTC 205933 Query 160318 ATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATG 160371 || || | || || | || |||||||| |||| |||||| ||||||||||| Sbjct 205932 GTTCACAATGCCATCAGACGCAGCAAAGAAGGCCAGCACGTGCGAGATGAAATG 205879 >seq1541 Length=81579 Score = 100 bits (110), Expect = 5e-16 Identities = 128/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 160199 GTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTG 160258 ||| | |||||| ||||||||| || ||||||||||| || || ||||||||| | Sbjct 59374 GTATCGATCAGCAGCGAGTACATCTCGCTATGCACATTTTCCATCGCAATCTGAAAGCCG 59315 Query 160259 TAGAAATATGTCGCCTCCAGATAC-TGCACCTCCTGTGTGAACCTTTGACCCAGATTGGC 160317 ||||| | |||||| | ||| ||||| ||||| |||| | || ||||||| | Sbjct 59314 TAGAAGCAGCGTGCCTCC-GTTACCTGCACTTCCTGGCTGAAGCGTTCCACCAGATTTTC 59256 Query 160318 ATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATG 160371 || || | || || | || |||||||| |||| |||||| ||||||||||| Sbjct 59255 GTTCACGATGCCATCAGACGCAGCAAAGAAGGCCAGCACGTGCGAGATGAAATG 59202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794652363730400