Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq98 152 1e-31
seq2250 150 4e-31
seq561 147 5e-30
seq843 134 3e-26
seq701 134 3e-26
>seq98
Length=483913
Score = 152 bits (168), Expect = 1e-31
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | ||| | ||||||||||| |||| ||||||||| | || ||| | ||||||
Sbjct 464701 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCATCC 464642
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||||||||||||||| | ||||||||| || ||| ||| || || |||
Sbjct 464641 TCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCC 464582
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| |||| ||||| | | || || ||||||||||| |||
Sbjct 464581 TGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAAGGCTCGACCTCCAACGTGATGGTC 464522
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | || |||||||| |||||
Sbjct 464521 TTGCCAGTCAACGTCTTCACAAAGATTTG 464493
Score = 150 bits (166), Expect = 4e-31
Identities = 164/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||||| || || | ||| || ||||||||||| |||| ||||||||| | || |||
Sbjct 465166 CGAAGTCGAAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTA 465107
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||| || |||||||||||||||||||| | ||||||||| || ||| ||| ||
Sbjct 465106 CGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCC 465047
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||||||| |||| ||||| | | || || |||| |
Sbjct 465046 TCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTCGACCTCCAGC 464987
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || || || ||||| || || ||
Sbjct 464986 GTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTG 464949
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | ||| | ||||||||||| |||| ||||||||| | || ||| | ||||||
Sbjct 464929 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCATCC 464870
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||||||||||||||| | ||||||||| || ||| ||| || || |||
Sbjct 464869 TCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCC 464810
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| |||| ||||| | | || || ||||||||||| |||
Sbjct 464809 TGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAAGGCTCGACCTCCAACGTGATGGTC 464750
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || ||
Sbjct 464749 TTGCCAGTCAGCGTCTTCACGAAGATCTG 464721
Score = 145 bits (160), Expect = 2e-29
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||||| || || | ||| || ||||||||||| || | ||||||||| | || |||
Sbjct 465628 CGAAGTCGAAGAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTA 465569
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||| || |||||||||||||||||||| | ||||||||| || ||| ||| ||
Sbjct 465568 CGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCC 465509
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||||||| |||| ||||| | | || || |||| |
Sbjct 465508 TCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTCGACCTCCAGC 465449
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || || || ||||| || || ||
Sbjct 465448 GTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTG 465411
Score = 89.7 bits (98), Expect = 1e-12
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997
|||||||||||||||||| | || |||||| | ||| || |||| |||||| |||||||
Sbjct 465075 ATCTTCGCCGGAAAGCAGCTTGAGGATGGACGTACTCTGTCCGACTACAACATCCAGAAG 465134
Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029
||||| || |||||| | ||| | |||||||
Sbjct 465135 GAGTCGACCCTTCACTTGGTTCTTCGACTTCG 465166
Score = 86.0 bits (94), Expect = 1e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997
|||||||||||||||||| | || |||||| | ||| || |||| |||||| | |||||
Sbjct 465537 ATCTTCGCCGGAAAGCAGCTTGAGGATGGACGTACTCTGTCCGACTACAACATTCAGAAG 465596
Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029
||||| || |||||| | ||| | |||||||
Sbjct 465597 GAGTCGACCCTTCACTTGGTTCTTCGACTTCG 465628
>seq2250
Length=42400
Score = 150 bits (166), Expect = 4e-31
Identities = 164/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| |||| ||| || || || || || || ||||| || | ||||||||| | || ||
Sbjct 17058 CGGAGTCGCAGCACCAGATGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGACAGGGTG 16999
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||||||||||||||| ||||| ||||||||||||||||| || ||| |||||||
Sbjct 16998 CGACCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGAATTCCT 16939
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||||| |||| ||||| | || || || || |
Sbjct 16938 TCCTTATCCTGGATCTTGGCTTTCACATTCTCGATCGTGTCCGATGGCTCGACCTCGAGT 16879
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| |||||||| |||||||| ||||| ||
Sbjct 16878 GTGATGGTCTTGCCCGTGAGTGTTTTCACGAAAATCTG 16841
>seq561
Length=219668
Score = 147 bits (162), Expect = 5e-30
Identities = 169/227 (74%), Gaps = 3/227 (1%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | |||||| || ||||| || || ||||| || | ||| ||||| | || ||
Sbjct 140028 CGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTG 139969
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||||| |||||| ||||| ||||| ||||||||||| ||||| ||||||
Sbjct 139968 CGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCT 139909
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| |||||| |||| ||||| | || ||| || || |
Sbjct 139908 TCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATTGTGTCGGATGGTTCGACCTCAAGG 139849
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
||||| ||||| || || ||||| |||||||| ||||| ||||||
Sbjct 139848 GTGATGGTCTTTCCGGTCAGAGTCTTCACAAAGATTTG---CATTTT 139805
Score = 136 bits (150), Expect = 9e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | |||||| || ||||| || || ||||| || | ||| ||||| | || ||
Sbjct 140484 CGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTG 140425
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||||| ||||| ||||| ||||| ||||||||||| ||||| ||||||
Sbjct 140424 CGACCATCTTCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCT 140365
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| |||||| |||| |||||| | || ||| || ||||
Sbjct 140364 TCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCCAGG 140305
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || ||||| || || || || ||
Sbjct 140304 GTGATGGTCTTTCCGGTCAGAGTCTTGACGAAGATCTG 140267
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | |||||| || ||||| || || ||||| || | ||| ||||| | || ||
Sbjct 140256 CGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTG 140197
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||||| |||||| ||||| ||||| ||||||||||| ||||| ||||||
Sbjct 140196 CGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCT 140137
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| |||||| |||| |||||| | || ||| || || |
Sbjct 140136 TCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCAAGG 140077
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || || || || || || || ||
Sbjct 140076 GTGATGGTCTTTCCGGTCAGCGTCTTGACGAAGATCTG 140039
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | || ||| || ||||| || || ||||| || | ||| ||||| | || ||
Sbjct 140712 CGCAGACGCAAGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTG 140653
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||||| |||||| ||||| ||||||||||||||||| || || ||||||
Sbjct 140652 CGACCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGGGGGATTCCT 140593
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| |||||| |||| |||||| | || ||| || || |
Sbjct 140592 TCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCAAGG 140533
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || || || || || || || ||
Sbjct 140532 GTGATGGTCTTTCCGGTCAGTGTCTTGACGAAGATCTG 140495
>seq843
Length=160513
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || ||||| || ||||||||||| |||| ||||||||| | || || | ||| ||
Sbjct 68852 AGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCC 68911
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||||||||| ||||||||||| || || || || || |||
Sbjct 68912 TCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCC 68971
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| |||||| |||| || || | || ||| || || | || || |||
Sbjct 68972 TGGATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTC 69031
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| ||||| || || || ||
Sbjct 69032 TTACCCGTGAGGGTTTTGACGAAGATCTG 69060
>seq701
Length=187196
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || ||||| || ||||||||||| |||| ||||||||| | || || | ||| ||
Sbjct 176835 AGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCC 176776
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||||||||| ||||||||||| || || || || || |||
Sbjct 176775 TCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCC 176716
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| |||||| |||| || || | || ||| || || | || || |||
Sbjct 176715 TGGATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTC 176656
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| ||||| || || || ||
Sbjct 176655 TTACCCGTGAGGGTTTTGACGAAGATCTG 176627
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || ||||| || ||||||||||| |||| ||||||||| | || || | ||| ||
Sbjct 183604 AGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCC 183545
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||||||||| ||||||||||| || || || || || |||
Sbjct 183544 TCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCC 183485
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| |||||| |||| || || | || ||| || || | || || |||
Sbjct 183484 TGGATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTC 183425
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| ||||| || || || ||
Sbjct 183424 TTACCCGTGAGGGTTTTGACGAAGATCTG 183396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178157441439530
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