Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq98 143 3e-29 seq843 138 1e-27 seq701 138 1e-27 seq561 118 1e-21 seq2250 102 9e-17 >seq98 Length=483913 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | ||| | |||| ||||| || |||||| ||||| ||||||||||| Sbjct 464716 CCTCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 464657 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| || | || || |||||||| |||||||| ||||| |||||||| || | || Sbjct 464656 AGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGA 464597 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | |||||||||| |||||| ||| | || | | |||||| | || || Sbjct 464596 ATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAAGGCTCGACC 464537 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||||||| ||||| |||| ||| || |||||||||||||| Sbjct 464536 TCCAACGTGATGGTCTTGCCAGTCAACGTCTTCACAAAGATTTGCAT 464490 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | ||| | |||| ||||| || |||||| ||||| ||||||||||| Sbjct 464944 CCTCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 464885 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| || | || || |||||||| |||||||| ||||| |||||||| || | || Sbjct 464884 AGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGA 464825 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | |||||||||| |||||| ||| | || | | |||||| | || || Sbjct 464824 ATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAAGGCTCGACC 464765 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||||||| ||||| |||||||| || || ||||| ||||| Sbjct 464764 TCCAACGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 464718 Score = 134 bits (148), Expect = 2e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| ||||| || | || || |||||||| |||||||| Sbjct 465137 CTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAA 465078 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| |||||||| || | || | | |||||||||| |||||| ||| | | Sbjct 465077 GATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTT 465018 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||| | || || |||| ||||||||| ||||| |||||||| || || Sbjct 465017 CTCGATCGTGTCCGAGGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCAC 464958 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 464957 GAAGATCTGCAT 464946 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||||||||| ||||| || | || || |||||||| |||||||| Sbjct 465599 CTCCTTCTGAATGTTGTAGTCGGACAGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAA 465540 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| |||||||| || | || | | |||||||||| |||||| ||| | | Sbjct 465539 GATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTT 465480 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||| | || || |||| ||||||||| ||||| |||||||| || || Sbjct 465479 CTCGATCGTGTCCGAGGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCAC 465420 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 465419 GAAGATCTGCAT 465408 >seq843 Length=160513 Score = 138 bits (152), Expect = 1e-27 Identities = 159/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| ||||||||||| || ||||| |||| || Sbjct 68854 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTC 68913 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||| |||||||| |||| |||||||| |||| ||| | || |||||||||| Sbjct 68914 CAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTG 68973 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||||| ||| | || | | ||| || | ||| || || | || ||||| || Sbjct 68974 GATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTT 69033 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 ||||| || ||||| || ||||| ||||| ||| Sbjct 69034 ACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 69067 >seq701 Length=187196 Score = 138 bits (152), Expect = 1e-27 Identities = 159/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| ||||||||||| || ||||| |||| || Sbjct 176833 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTC 176774 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||| |||||||| |||| |||||||| |||| ||| | || |||||||||| Sbjct 176773 CAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTG 176714 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||||| ||| | || | | ||| || | ||| || || | || ||||| || Sbjct 176713 GATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTT 176654 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 ||||| || ||||| || ||||| ||||| ||| Sbjct 176653 ACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 176620 Score = 138 bits (152), Expect = 1e-27 Identities = 159/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| ||||||||||| || ||||| |||| || Sbjct 183602 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTC 183543 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||| |||||||| |||| |||||||| |||| ||| | || |||||||||| Sbjct 183542 CAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTG 183483 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||||| ||| | || | | ||| || | ||| || || | || ||||| || Sbjct 183482 GATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTT 183423 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 ||||| || ||||| || ||||| ||||| ||| Sbjct 183422 ACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 183389 >seq561 Length=219668 Score = 118 bits (130), Expect = 1e-21 Identities = 167/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | | ||||| |||||||| | || ||||| || || || ||||||| Sbjct 140036 TGCCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGG 139977 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || | |||||||||||| || |||| |||||||| || | | Sbjct 139976 ACAGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGG 139917 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | ||||||||| ||||| ||| | || | | |||||| | ||| | Sbjct 139916 GGATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATTGTGTCGGATGGTTCGA 139857 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCA 46599 | || | |||||||| || || ||||| || || |||||||||||||||||||| Sbjct 139856 CCTCAAGGGTGATGGTCTTTCCGGTCAGAGTCTTCACAAAGATTTGCATTTTGCA 139802 Score = 102 bits (112), Expect = 9e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | | ||||| |||||||| | || ||||| || || || ||||||| Sbjct 140264 TGCCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGG 140205 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || | |||||||||||| || |||| |||||||| || | | Sbjct 140204 ACAGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGG 140145 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | ||||||||| ||||| ||| | || | | |||||| | ||| | Sbjct 140144 GGATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGA 140085 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | |||||||| || || |||||||| || || ||||| ||||| Sbjct 140084 CCTCAAGGGTGATGGTCTTTCCGGTCAGCGTCTTGACGAAGATCTGCAT 140036 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | | ||||| |||||||| | || ||||| || || || ||||||| Sbjct 140492 TGCCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGG 140433 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || | ||||||||||| || |||| |||||||| || | | Sbjct 140432 ACAGGGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGG 140373 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | ||||||||| ||||| ||| | || | | |||||| | ||| | Sbjct 140372 GGATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGA 140313 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| |||||||| || || ||||| || || || ||||| ||||| Sbjct 140312 CCTCCAGGGTGATGGTCTTTCCGGTCAGAGTCTTGACGAAGATCTGCAT 140264 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 |||||| |||||||| | || ||||| || || || |||||||| || ||||| | Sbjct 140707 ACGCAAGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACC 140648 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || | |||||||||||| || || | |||||||| || | || | | ||||| Sbjct 140647 ATCTTCCAACTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGGGGGATTCCTTCCTT 140588 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| ||||| ||| | || | | |||||| | ||| || || | ||||| Sbjct 140587 GTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCAAGGGTGAT 140528 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || ||||| || || || ||||| ||||| Sbjct 140527 GGTCTTTCCGGTCAGTGTCTTGACGAAGATCTGCAT 140492 >seq2250 Length=42400 Score = 102 bits (112), Expect = 9e-17 Identities = 154/218 (71%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| ||||||||| | || ||||| || || ||||||||||| || ||||| | Sbjct 17052 CGCAGCACCAGATGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCA 16993 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || |||||||||||||| || || | |||||||| || | || | | ||||| Sbjct 16992 TCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGAATTCCTTCCTTA 16933 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT---TCCACATCCACCGTG 46555 ||| |||||| || | || | | |||||| |||| || || || | ||| Sbjct 16932 TCCTGGATCTTGGCTTTCACATTCTCGATCGTGTC---CGATGGCTCGACCTCGAGTGTG 16876 Query 46556 ATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| |||||||| || ||||| || || || ||||| Sbjct 16875 ATGGTCTTGCCCGTGAGTGTTTTCACGAAAATCTGCAT 16838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564880957366800