Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq2250 96.9 1e-14 seq561 87.8 7e-12 seq843 84.2 9e-11 seq701 84.2 9e-11 >seq2250 Length=42400 Score = 96.9 bits (106), Expect = 1e-14 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106 || ||| | |||||||| |||||||| || || || || || || || || || || || Sbjct 16835 ATCATGCAGATTTTCGTGAAAACACTCACGGGCAAGACCATCACACTCGAGGTCGAGCCA 16894 Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 || || | || || | | ||| || || || |||||||||||||||||||| ||| Sbjct 16895 TCGGACACGATCGAGAATGTGAAAGCCAAGATCCAGGATAAGGAAGGAATTCCTCCAGAT 16954 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226 || || ||| | || || | || || || || |||||||| | || || | || || Sbjct 16955 CAGCAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCCGACTAC 17014 Query 391227 AATATTGATAAGGATGCAACACTTCA 391252 || ||| | ||||| | || ||||| Sbjct 17015 AACATTCAGAAGGAATCCACCCTTCA 17040 >seq561 Length=219668 Score = 87.8 bits (96), Expect = 7e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || |||||||| || || || || || ||||| || ||| |||| Sbjct 140492 ATGCAGATCTTCGTCAAGACACTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCC 140551 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || || ||||| || ||||||||||| || || ||||| Sbjct 140552 GACACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCAGATCAG 140611 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || || | |||||||| | || || | || ||||| Sbjct 140612 CAGCGTCTCATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAAC 140671 Query 391230 ATTGATAAGGA 391240 ||| | ||||| Sbjct 140672 ATTCAGAAGGA 140682 Score = 84.2 bits (92), Expect = 9e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||| || || || || || ||||| || ||| |||| Sbjct 140036 ATGCAGATCTTCGTCAAGACGCTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCC 140095 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || || ||||| || ||||||||||| || || ||||| Sbjct 140096 GACACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCAG 140155 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || || | |||||||| | || || | || ||||| Sbjct 140156 CAGCGTCTGATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAAC 140215 Query 391230 ATTGATAAGGA 391240 ||| | ||||| Sbjct 140216 ATTCAGAAGGA 140226 Score = 84.2 bits (92), Expect = 9e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||| || || || || || || || || ||| |||| Sbjct 140264 ATGCAGATCTTCGTCAAGACTCTGACCGGAAAGACCATCACCCTGGAGGTCGAACCATCC 140323 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || || ||||| || ||||||||||| || || ||||| Sbjct 140324 GACACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCAG 140383 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || ||| | |||||||| | || || | || ||||| Sbjct 140384 CAGCGTCTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACCCTGTCCGACTATAAC 140443 Query 391230 ATTGATAAGGA 391240 ||| | ||||| Sbjct 140444 ATTCAGAAGGA 140454 >seq843 Length=160513 Score = 84.2 bits (92), Expect = 9e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| || || ||||| || ||||||||||| || ||| |||| Sbjct 69063 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACTCTTGAGGTCGAACCATCG 69004 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | || || || || || ||||| || || || || ||||| Sbjct 69003 GATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGATCAG 68944 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || || || || ||| | || || | || || || Sbjct 68943 CAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTACAAC 68884 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| | || |||||| Sbjct 68883 ATCCAGAAGGAGTCGACCCTTCAC 68860 >seq701 Length=187196 Score = 84.2 bits (92), Expect = 9e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| || || ||||| || ||||||||||| || ||| |||| Sbjct 176624 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACTCTTGAGGTCGAACCATCG 176683 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | || || || || || ||||| || || || || ||||| Sbjct 176684 GATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGATCAG 176743 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || || || || ||| | || || | || || || Sbjct 176744 CAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTACAAC 176803 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| | || |||||| Sbjct 176804 ATCCAGAAGGAGTCGACCCTTCAC 176827 Score = 84.2 bits (92), Expect = 9e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| || || ||||| || ||||||||||| || ||| |||| Sbjct 183393 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACTCTTGAGGTCGAACCATCG 183452 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | || || || || || ||||| || || || || ||||| Sbjct 183453 GATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGATCAG 183512 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || || || || ||| | || || | || || || Sbjct 183513 CAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTACAAC 183572 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| | || |||||| Sbjct 183573 ATCCAGAAGGAGTCGACCCTTCAC 183596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974437770203720