Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq2250 96.9 1e-14
seq561 87.8 7e-12
seq843 84.2 9e-11
seq701 84.2 9e-11
>seq2250
Length=42400
Score = 96.9 bits (106), Expect = 1e-14
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106
|| ||| | |||||||| |||||||| || || || || || || || || || || ||
Sbjct 16835 ATCATGCAGATTTTCGTGAAAACACTCACGGGCAAGACCATCACACTCGAGGTCGAGCCA 16894
Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166
|| || | || || | | ||| || || || |||||||||||||||||||| |||
Sbjct 16895 TCGGACACGATCGAGAATGTGAAAGCCAAGATCCAGGATAAGGAAGGAATTCCTCCAGAT 16954
Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226
|| || ||| | || || | || || || || |||||||| | || || | || ||
Sbjct 16955 CAGCAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCCGACTAC 17014
Query 391227 AATATTGATAAGGATGCAACACTTCA 391252
|| ||| | ||||| | || |||||
Sbjct 17015 AACATTCAGAAGGAATCCACCCTTCA 17040
>seq561
Length=219668
Score = 87.8 bits (96), Expect = 7e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || |||||||| || || || || || ||||| || ||| ||||
Sbjct 140492 ATGCAGATCTTCGTCAAGACACTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCC 140551
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | ||| || | | || || ||||| || ||||||||||| || || |||||
Sbjct 140552 GACACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCAGATCAG 140611
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| | || || | || || || | |||||||| | || || | || |||||
Sbjct 140612 CAGCGTCTCATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAAC 140671
Query 391230 ATTGATAAGGA 391240
||| | |||||
Sbjct 140672 ATTCAGAAGGA 140682
Score = 84.2 bits (92), Expect = 9e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || ||||| || || || || || ||||| || ||| ||||
Sbjct 140036 ATGCAGATCTTCGTCAAGACGCTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCC 140095
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | ||| || | | || || ||||| || ||||||||||| || || |||||
Sbjct 140096 GACACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCAG 140155
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| | || || | || || || | |||||||| | || || | || |||||
Sbjct 140156 CAGCGTCTGATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAAC 140215
Query 391230 ATTGATAAGGA 391240
||| | |||||
Sbjct 140216 ATTCAGAAGGA 140226
Score = 84.2 bits (92), Expect = 9e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || ||||| || || || || || || || || ||| ||||
Sbjct 140264 ATGCAGATCTTCGTCAAGACTCTGACCGGAAAGACCATCACCCTGGAGGTCGAACCATCC 140323
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | ||| || | | || || ||||| || ||||||||||| || || |||||
Sbjct 140324 GACACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCAG 140383
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| | || || | || || ||| | |||||||| | || || | || |||||
Sbjct 140384 CAGCGTCTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACCCTGTCCGACTATAAC 140443
Query 391230 ATTGATAAGGA 391240
||| | |||||
Sbjct 140444 ATTCAGAAGGA 140454
>seq843
Length=160513
Score = 84.2 bits (92), Expect = 9e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| ||||| || || ||||| || ||||||||||| || ||| ||||
Sbjct 69063 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACTCTTGAGGTCGAACCATCG 69004
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || || | | || || || || || ||||| || || || || |||||
Sbjct 69003 GATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGATCAG 68944
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| | || ||| | || || || || || || ||| | || || | || || ||
Sbjct 68943 CAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTACAAC 68884
Query 391230 ATTGATAAGGATGCAACACTTCAC 391253
|| | ||||| | || ||||||
Sbjct 68883 ATCCAGAAGGAGTCGACCCTTCAC 68860
>seq701
Length=187196
Score = 84.2 bits (92), Expect = 9e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| ||||| || || ||||| || ||||||||||| || ||| ||||
Sbjct 176624 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACTCTTGAGGTCGAACCATCG 176683
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || || | | || || || || || ||||| || || || || |||||
Sbjct 176684 GATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGATCAG 176743
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| | || ||| | || || || || || || ||| | || || | || || ||
Sbjct 176744 CAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTACAAC 176803
Query 391230 ATTGATAAGGATGCAACACTTCAC 391253
|| | ||||| | || ||||||
Sbjct 176804 ATCCAGAAGGAGTCGACCCTTCAC 176827
Score = 84.2 bits (92), Expect = 9e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| ||||| || || ||||| || ||||||||||| || ||| ||||
Sbjct 183393 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACTCTTGAGGTCGAACCATCG 183452
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || || | | || || || || || ||||| || || || || |||||
Sbjct 183453 GATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGATCAG 183512
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| | || ||| | || || || || || || ||| | || || | || || ||
Sbjct 183513 CAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTACAAC 183572
Query 391230 ATTGATAAGGATGCAACACTTCAC 391253
|| | ||||| | || ||||||
Sbjct 183573 ATCCAGAAGGAGTCGACCCTTCAC 183596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1974437770203720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |