Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1066 125 9e-24 seq569 89.7 6e-13 >seq1066 Length=128711 Score = 125 bits (138), Expect = 9e-24 Identities = 247/359 (69%), Gaps = 6/359 (2%) Strand=Plus/Minus Query 175841 CCCGTACCGATACCCTCTGTACCGTTCACGAGAACCATGGGGAGTGTTGGCATGTAGAAG 175900 || ||||||||||| || | |||||| | || | ||| || | | |||| || || Sbjct 6281 CCGGTACCGATACCTTCCGAACCGTTGATCAGCAGCATCGGAATGATCGGCAGATACCAG 6222 Query 175901 TCTGGCTCAATGGGGCGACCATCGTCATCCAAATAGTTGAGAATTGGATCATCTCTCGGA 175960 | || || ||| | || ||||| | | || | || | ||||||||| |||| Sbjct 6221 ACCGGTTCGATGCGCTGATTGTCGTCGTACTGGTACTCCAGCAGTGGATCATCGAGCGGA 6162 Query 175961 TCAAAGATCTTTCGGGCATCTTTTGTGAGCTTTGTAAAGATATACCTCGTT-TGAGACGC 176019 | |||||| | || | | | | | | | |||||||| ||||||| || || Sbjct 6161 TGAAAGATGTGGCGCGTCAGTGTCGACATCATGGTAAAGATGTACCTCGGGCTGGCACTG 6102 Query 176020 ATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATT 176079 ||||| |||||| | | |||||||||||||||||| | ||| | || |||||||| || Sbjct 6101 -TCCTTTCCACCCGTCAAACGCGTACCAAACTGACCGCCCGGATACAGCAGATTGATGTT 6043 Query 176080 GTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACT--TCA 176137 ||| || | |||| | ||||| ||||| |||||| || | || |||| ||| Sbjct 6042 GTTGCTGCCGACATAGTTCTGCGCCAGATTGACGATCGTG-GAGC-AAAGCGACTGCTCA 5985 Query 176138 CCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTC 176196 |||||||||||||| |||||| || || || | |||| ||| ||||| |||| ||| Sbjct 5984 CCGTGGTGGTACGCGGACTTCTCCGCAACCGATCCAGCCAGCTGGGCCACCTTCACCTC 5926 >seq569 Length=217393 Score = 89.7 bits (98), Expect = 6e-13 Identities = 97/126 (77%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 102190 TCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGG 102248 |||| |||||| || ||||||||||||||| ||| ||| |||| | |||| ||| Sbjct 206253 TCGCGTTTGCGGCCGTCGAGGGTATCTTCTTCAGCGGTAGCTT-TGCGTCCATTTTCTGG 206311 Query 102249 CTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGAC 102308 || ||||||||||| || ||||| || || ||||| |||||||| || || || ||| Sbjct 206312 CTGAAGAAGCGAGGCCTGATGCCCGGGCTGACGTTCTCGAACGAGCTGATTTCGCGCGAC 206371 Query 102309 GAGGGA 102314 |||||| Sbjct 206372 GAGGGA 206377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620349858024800