Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq591 93.3 5e-14 >seq591 Length=212830 Score = 93.3 bits (102), Expect = 5e-14 Identities = 500/787 (64%), Gaps = 13/787 (2%) Strand=Plus/Minus Query 109972 TCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATA 110031 ||||||| ||| ||| |||||||||| | || || ||||| ||| || || Sbjct 136927 TCGTACGGCCCGTCACGGGCGGCCAACTCACAGCTCGCTTCCAGTGCGCCATAGTAGATG 136868 Query 110032 GTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGA-AGACCACA 110090 || ||||| || || ||||| | | ||||||| ||| | ||| || || Sbjct 136867 GTTTCAAATATTTGCTGATTCAGCTTTTGGGCTTCTTCACTTTCGTATGGATAGCGCATT 136808 Query 110091 AAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTT 110150 || ||| || |||| || | ||||||||||| | ||| || || | ||| |||||| Sbjct 136807 AA-AATGAATGCATCTGCCATGCCCTGAACACCAATACCGATCGGCCTATGGCGCATGTT 136749 Query 110151 AGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTT 110210 |||||| || |||||| || | || |||||||| || ||||| Sbjct 136748 AGAGCGCTTTGCCTCCGGTACGGGATAGTAATTTATGTCGATGATTTTGTTCAGATTGCG 136689 Query 110211 CGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATT 110270 ||||||| || | | || || | || || | | ||| ||||||| |||| || Sbjct 136688 CGTCACAATCCTGGCGACGTCCTTCAGCTTTGCAAAGTCGTACGTTTT-GTCT--GGCTT 136632 Query 110271 GACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGT 110330 ||| | || | || || || || ||||| ||||| | || ||||| | Sbjct 136631 CACAAACATGTTCAACGCGATCGAGGCCAGATTACACACCGCTACTTCATCTTTCGACGA 136572 Query 110331 GTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATT 110390 ||| |||| |||||| ||||| | || |||| ||| ||| || | ||||| |||||| Sbjct 136571 GTACTCCACAATTTCGGTACAAAGATTAGAACACTTGATGGTGCCAATGTTCTGCTGATT 136512 Query 110391 CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGA 110450 || ||| ||||| ||||| || || ||||| || ||| |||||| ||| || Sbjct 136511 GCTCTTACGGTTACATGCGTCCTTGTACAGTATGTACGGCACACCTGTTTCCACCTGCGA 136452 Query 110451 CTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTG-CGT-TAGCGAGACCTTCC 110508 || | || | ||| | ||| | | | || || ||| || | || ||| Sbjct 136451 CTCAATGATTGAAAACCACAGATC--CCGTGCCTTCACCTGTCGTATAAATCGGCCCTCC 136394 Query 110509 TCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTC 110568 | |||||| | ||||||| | ||| || |||| || | ||||| || || Sbjct 136393 TTCTCGTAGCTAGTGTACAGCTTCTCGAACTCCTCACCCCAGGTATCAGCCAGTCCGGGA 136334 Query 110569 GCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGG 110628 | || ||||| | ||| ||| || || | |||| |||| ||||||||||| Sbjct 136333 CAGTCGTGCGGACACATTAGGCTCCACATTTCATTCGCCTCCACCCGAGTCATGAACAGG 136274 Query 110629 TCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGT-T 110687 || || ||||||| || |||| | || || || |||| || | || ||| | Sbjct 136273 TCCGGGATCCACAGGGCGTAGAACATATCTCGAGCTCGCACCTCCTCCTTGCC--GGTAT 136216 Query 110688 GAGGCGT-AGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA 110746 | | || |||| ||| || | |||||| |||||||||||||| |||| || | Sbjct 136215 TTTTCTTCAGATCCAGAAACTCGAATATATCCCCATGCCATGGTTCGAGGTAGATGGCAA 136156 Query 110747 TGGATCC 110753 || ||| Sbjct 136155 AGGCTCC 136149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588603546302000