Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq591 134 2e-26 seq1066 104 3e-17 >seq591 Length=212830 Score = 134 bits (148), Expect = 2e-26 Identities = 487/754 (65%), Gaps = 15/754 (2%) Strand=Plus/Minus Query 106169 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 106228 ||||| ||||||||||| ||||| | | | || ||||||||||| || | |||| Sbjct 136906 GCCAACTCACAGCTCGCTTCCAGTGCGCCATAGTAGATGGTTTCAAATATTTGCTGATTC 136847 Query 106229 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 106288 | || | |||||| || || ||| ||||| ||||| ||| |||| || | Sbjct 136846 AGCTTTTGGGCTTCTTCACTTTCGTATGGATAGCGCATTAAAATGAATGCATCTGCCATG 136787 Query 106289 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA---CTTTCGCGCAGTCTCA 106345 || |||||||| | ||| || || || || ||||| ||||| |||| || | Sbjct 136786 CCCTGAACACCAATACCGATCGGCCTATGGCGCATGTTAGAGCGCTTT---GCCTCCGGT 136730 Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 106405 |||||||| ||||| |||| |||| | ||| ||||| || |||||| | | || Sbjct 136729 ACGGGATAGTAATTTATGTCGATGATTTTGTTCAGATTGCGCGTCACAATCCTGGCGACG 136670 Query 106406 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCG 106465 || | || ||| || | || | || | ||| || ||| || | | ||| Sbjct 136669 TCCTTCAGCTTTGCAAAGTCGTACGT---TTTGTCTGGCTTCACAAACATGTTCAACGCG 136613 Query 106466 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 106525 || || |||| ||| || || || ||||| || | |||||| | |||||| ||| Sbjct 136612 ATCGAGGCCAGATTACACACCGCTACTTCATCTTTCGACGAGTACTCCACAATTTCGGTA 136553 Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCA 106585 || | || |||| ||| || || || | |||| || || ||||| ||| || || Sbjct 136552 CAAAGATTAGAACACTTGATGGTGCCAATGTTCTGCTGATTGCTCTTACGGTTACATGCG 136493 Query 106586 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCAC 106645 |||||||| || ||||| ||| || || ||| ||| |||| | |||| |||| Sbjct 136492 TCCTTGTACAGTATGTACGGCACACCTGTTTCCACCTGCGACTCAATGATTGAAAACCAC 136433 Query 106646 ACATCGGCGGCTGGTACAATGGCGT-TGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAG 106704 | ||| || || || ||| | || |||||| |||||| | ||||| || Sbjct 136432 AGATCCCGTGCCTTCAC-CTGTCGTATAAATCGGCCCTCCTTCTCGTAGCTAGTGTACAG 136374 Query 106705 GGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAG 106764 || |||||||||||| | || | || || || | || ||||| | || Sbjct 136373 CTTCTCGAACTCCTCACCCCAGGTATCAGCCAGTCCGGGACAGTCGTGCGGACACATTAG 136314 Query 106765 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGA 106824 ||| || | |||| ||||| ||||||| ||||| || |||||||||| | Sbjct 136313 GCTCCACATTTCATTCGCCTCCACCCGAGTCATGAACAGGTCCGGGATCCACAGGGCGTA 136254 Query 106825 AAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGT-TGAGTCGT-AACTCAAGGAAC 106882 || | ||||| | || |||| || | || ||| | || | | || || ||| Sbjct 136253 GAACATATCTCGAGCTCGCACCTCCTCCTTGCC--GGTATTTTTCTTCAGATCCAGAAAC 136196 Query 106883 TCCATGATATCCGCGTGCCATGGCTCAAGATAGA 106916 || | |||||| | |||||||| || || |||| Sbjct 136195 TCGAATATATCCCCATGCCATGGTTCGAGGTAGA 136162 >seq1066 Length=128711 Score = 104 bits (114), Expect = 3e-17 Identities = 241/357 (68%), Gaps = 10/357 (3%) Strand=Plus/Minus Query 168291 CCCGTACCGATACCTTCGGTTCCATTCACGAGAACCATTGGTATGGTTGGCATGTAAAAG 168350 || |||||||||||||| | || || | || | ||| || ||| | |||| || || Sbjct 6281 CCGGTACCGATACCTTCCGAACCGTTGATCAGCAGCATCGGAATGATCGGCAGATACCAG 6222 Query 168351 TCTGGTTCAATTGAGCGCCCATCATCATCCAA---GTAGTTGAGGATCGGGTCATCCCGA 168407 | ||||| || |||| || || || | ||| | || | || ||||| | Sbjct 6221 ACCGGTTCGAT---GCGCTGATTGTCGTCGTACTGGTACTCCAGCAGTGGATCATCGAGC 6165 Query 168408 GGATCAAAGATCTTGCGAGCCTCTTTGGTAAGTTTTGTGAAAATGTACCTCGT-CTGAGA 168466 |||| |||||| | ||| | | | | | | | || || |||||||||| ||| | Sbjct 6164 GGATGAAAGATGTGGCGCGTCAGTGTCGACATCATGGTAAAGATGTACCTCGGGCTG-GC 6106 Query 168467 AGCATCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAAT 168526 | ||||| |||||| | | |||||||||||| ||||| | ||| | || || || || Sbjct 6105 ACTGTCCTTTCCACCCGTCAAACGCGTACCAAACTGACCGCCCGGATACAGCAGATTGAT 6046 Query 168527 GTTGTTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGTGTCCGCTAAG-GATACTT 168585 |||||| || |||| | |||| || || |||||| || ||| || | Sbjct 6045 GTTGTTGCTGCCGACATAGTTCTGCGCCAGATTGACGATCGTGGA-GCAAAGCGACTGCT 5987 Query 168586 CACCATGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCA 168642 |||| ||||||||||| ||||| ||||| || || | ||||| || |||||||||| Sbjct 5986 CACCGTGGTGGTACGCGGACTTCTCCGCAACCGATCCAGCCAGCTGGGCCACCTTCA 5930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589607710891600