Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1376 100 3e-16 >seq1376 Length=95584 Score = 100 bits (110), Expect = 3e-16 Identities = 160/228 (70%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAA--CAA 158500 ||| |||| ||| | || | || ||||||||||||||||| || |||||||| | Sbjct 72962 CAACGGTTAGGTGTGCCGCTAGGTTACGGAGGTCCTCATGCAGCGTTCTTTGCCTGTCGG 72903 Query 158501 CAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAG 158560 |||| || || || ||| |||||| | || | ||| | | |||| || | Sbjct 72902 CAGA--AGCTTACCCGACTGATTCCTGGCCGCATGATTGGTGTGACGCGCGATATGGACG 72845 Query 158561 GTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAG 158620 || | | || ||| | || || || || || | || ||||| ||| | | ||||| | Sbjct 72844 GTGAGGATGCGTACCGGTTGGCGCTTCAAACGCGCGAACAGCACATCCGCCGGGACAAGG 72785 Query 158621 CAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTG 158668 | || |||||||||||||| |||||||||||||| || |||||| ||| Sbjct 72784 CGACGAGTAACATCTGCACGGCACAAGCACTGCTCGCCAATATGGCTG 72737 Score = 100 bits (110), Expect = 3e-16 Identities = 160/228 (70%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAA--CAA 158500 ||| |||| ||| | || | || ||||||||||||||||| || |||||||| | Sbjct 76630 CAACGGTTAGGTGTGCCGCTAGGTTACGGAGGTCCTCATGCAGCGTTCTTTGCCTGTCGG 76571 Query 158501 CAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAG 158560 |||| || || || ||| |||||| | || | ||| | | |||| || | Sbjct 76570 CAGA--AGCTTACCCGACTGATTCCTGGCCGCATGATTGGTGTGACGCGCGATATGGACG 76513 Query 158561 GTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAG 158620 || | | || ||| | || || || || || | || ||||| ||| | | ||||| | Sbjct 76512 GTGAGGATGCGTACCGGTTGGCGCTTCAAACGCGCGAACAGCACATCCGCCGGGACAAGG 76453 Query 158621 CAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTG 158668 | || |||||||||||||| |||||||||||||| || |||||| ||| Sbjct 76452 CGACGAGTAACATCTGCACGGCACAAGCACTGCTCGCCAATATGGCTG 76405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587679331122400