Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq591 212 7e-50 seq368 174 2e-38 seq569 84.2 2e-11 >seq591 Length=212830 Score = 212 bits (234), Expect = 7e-50 Identities = 854/1352 (63%), Gaps = 21/1352 (2%) Strand=Plus/Minus Query 47489 CCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACT 47548 ||| | ||||||||| | || | ||||| | || || || | || ||||| || Sbjct 137009 CCAGTTCCAAAGATCCGTCGGTTCTTTGTTCCACATGTCGTACTGTAAGATGCCTTTGCT 136950 Query 47549 TATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGC 47608 | |||| ||| | ||||||| || || |||| | || | ||||| || || Sbjct 136949 CACCGGACTACCTTCGTATGTTTCGTACGGCCCGTCACGGGCGGCCAACTCACAGCTCGC 136890 Query 47609 TTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGA 47668 ||||| ||| | ||| || || ||||||||||||| || || || |||||| Sbjct 136889 TTCCAGTGCGCCATAGTAGATGGTTTCAAATATTTGCTGATTCAGCTTTTGGGCTTCTTC 136830 Query 47669 TGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACC 47728 ||| | ||||| |||| |||||||| || |||||||||||||| Sbjct 136829 ACTTTCGTATGGATAGCGCATTAAAATGAATGCATCTGCCATGCCCTGAACACCAATACC 136770 Query 47729 AATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATC 47788 || || ||||| | ||||| || || || |||| ||||| | ||||| || Sbjct 136769 GATCGGCCTATGGCGCATGTTAGAGCGCTTTGCCTCCGGTACGGGATAGTAATTTATGTC 136710 Query 47789 TATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATC 47848 || ||||| || ||| | | || | | || ||| || Sbjct 136709 GATGATTTTGTTCAGATTGCGCGTCACAATCCTGGCGACGTCCTTCAGCTTTGCAAAGTC 136650 Query 47849 AAACTTGTTATTTA---TAACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGC 47905 || | || | | | |||||| | || | || || || || |||||||| || || Sbjct 136649 GTACGTTTTGTCTGGCTTCACAAACATGTTCAACGCGATCGAGGCCAGATTACACACCGC 136590 Query 47906 TACCTCAT--TTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATA 47963 ||| |||| || || |||| | | ||||| | ||| |||||| ||| ||||| Sbjct 136589 TACTTCATCTTTCGACGAGTAC--TCCACAATTTCGGTACAAAGATTAGAACACTTGATG 136532 Query 47964 GTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGT 48023 || || | || || ||||| | |||||||||||||||||| || || | || Sbjct 136531 GTGCCAATGTTCTGCTGATTGCTCTTACGGTTACATGCGTCCTTGTACAGTATGTACGGC 136472 Query 48024 GTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACA 48083 || ||||| | ||| || |||||||| || ||| | | || ||||| || Sbjct 136471 ACACCTGTTTCCACCTGCGACTCAATGATTGAAAACCACAGATCCCGTGCCTT-----CA 136417 Query 48084 GCTCTAGCTTTATTA-----TCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCC 48138 || | | | | | || | ||||| |||| || | |||||| || || || | Sbjct 136416 CCTGTCGTATAAATCGGCCCTCCTTCTCGTAGCTAGTGTACAGCTTCTCGAACTCCTCAC 136357 Query 48139 CATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCAT 48198 | | || | | | || ||||| || | |||||||| | ||| |||| Sbjct 136356 CCCAGGTATCAGCCAGTCCGGGACAGTCGTGCGGACACATTAGGCTCCACATTTCATTCG 136297 Query 48199 TTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTC 48258 | || | |||||| || | || || ||||| || || || | ||| | || || Sbjct 136296 CCTCCACCCGAGTCATGAACAGGTCCGGGATCCACAGGGCGTAGAACATATCTCGAGCTC 136237 Query 48259 TTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCC 48318 | || || ||||| |||| | || || || ||||| || | |||||| |||||| Sbjct 136236 GCACCTCCTCCTTGCCGGTATTTTTCTTCAGATCCAGAAACTCGAATATATCCCCATGCC 136177 Query 48319 ATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATC 48378 ||||||| | || || || | | || || ||||| || || || ||||| | || | Sbjct 136176 ATGGTTCGAGGTAGATGGCAAAGGCTCCGGGCCGTTTGTTGCCACCCTGATCCACGTACC 136117 Query 48379 TGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTC 48438 || |||||||| ||||| | |||||||| || | || || || || ||||| |||| Sbjct 136116 GTGCCGTATTGTTGTAAACGCGCAACATTGGCACCAACCCGTTCGAAATCCCATTCGTTC 136057 Query 48439 CCGAAATATAACTTCCACTAGCTC--TTATATTACTAATTGAAATACCTATACCACCTGC 48496 | || || || |||| | || | || | | | ||| | || ||||| || || Sbjct 136056 CGGAGATGTACGTTCCTTTGGCGCGAATACAGTGCACATT--CAGCCCGATACCGCCGGC 135999 Query 48497 CATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATC 48556 | ||| || || || |||||| | || | ||||| || || || || ||||| || || Sbjct 135998 CGATTTTGAAATCAGTGCACACTGCTTCAACGTATCGTAGATACCCTCAATACTGTCGTC 135939 Query 48557 TATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAA 48616 |||| | | ||||| ||| || | ||||| | || | | ||| | Sbjct 135938 CGACATAGTAAGCAGAAAGCAAGACGATAGCTGCGGGCGCTGCGTAGCGGCCGCAAACAT 135879 Query 48617 TGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGA 48676 || || || || || |||| | ||| || | | || || || ||||| | | Sbjct 135878 GGTCGGTGAGGCGTGCGTAAAGTAGCGCTCCGAAAGTAGATTGTAAGTCTCAATTGCTGC 135819 Query 48677 ATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTC 48736 ||| || || | ||| || || |||| || ||||| ||||| | ||| |||| ||| Sbjct 135818 ATCGATGTCTTCTCCATGAATGCCGATAGCAACGCGCATCAACATGTGTTGCGGTCGTTC 135759 Query 48737 AACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATA 48796 | |||||| || || ||||| | ||| ||| |||||||||||| || || ||||| Sbjct 135758 CGCGATTTTGCCCTTGATCTTCAACAAATAGGATCGTTCCAATGTTTTGAAGCCGAAATA 135699 Query 48797 GTTGTATGAAAAGTCGTTATCATTAATAATTG 48828 ||||||| || || ||| | |||||||| Sbjct 135698 GTTGTATCCGAAATCACGATCGTAAATAATTG 135667 >seq368 Length=285863 Score = 174 bits (192), Expect = 2e-38 Identities = 624/973 (64%), Gaps = 18/973 (2%) Strand=Plus/Minus Query 47865 ACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCAT--TTGGATTAG 47922 |||||| | || | || || || || |||||||| || ||||| |||| || || || Sbjct 114498 ACAAACATGTTCAACGCGATCGAGGCCAGATTACACACCGCTACTTCATCTTTCGACGAG 114439 Query 47923 TATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGAT 47982 || | | ||||| | ||| |||||| ||| ||||| || || | || || |||| Sbjct 114438 TAC--TCCACAATTTCGGTACAAAGATTAGAACACTTGATGGTGCCAATGTTCTGCTGAT 114381 Query 47983 TATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAG 48042 | | |||||||||||||||||| || || | || || ||||| | ||| | Sbjct 114380 TGCTCTTACGGTTACATGCGTCCTTGTACAGTATGTACGGCACACCTGTTTCCACCTGCG 114321 Query 48043 ATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTA---- 48098 | |||||||| || ||| | | || ||||| || || | | | | | Sbjct 114320 ACTCAATGATTGAAAACCACAGATCCCGTGCCTT-----CACCTGTCGTATAAATCGGCC 114266 Query 48099 -TCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCC 48157 || | ||||| |||| || | |||||| || || || || | || | | | || Sbjct 114265 CTCCTTCTCGTAGCTAGTGTACAGCTTCTCGAACTCCTCACCCCAGGTATCAGCCAGTCC 114206 Query 48158 AGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAA 48217 |||||| || | || ||||| | ||| |||| | || | |||||| || Sbjct 114205 AGGACAGTCGTGCGGGCACATTAGGCTCCACATTTCATTCGCCTCCACCCGAGTCATGAA 114146 Query 48218 TATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACT 48277 | || || ||||| || || || | || | | || | || || ||||| | Sbjct 114145 CAGGTCCGGGATCCACAGGGCGTAGAACATGTCTCGTGCTCGCACCTCCTCCTTGCCGGT 114086 Query 48278 ATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGC 48337 ||| | || || || ||||| || | |||||| ||||||||||||| | || || || Sbjct 114085 ATTTTTCTTCAGATCCAGAAACTCGAATATATCCCCATGCCATGGTTCGAGGTAGATGGC 114026 Query 48338 CATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAAC 48397 | | || || ||||| || || || ||||| | || | || |||||||| ||||| Sbjct 114025 AAAGGCTCCGGGCCGTTTGTTGCCACCCTGATCCACGTACCGTGCCGTATTGTTGTAAAC 113966 Query 48398 TCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACT 48457 | | |||||| || | || || || || ||||| ||||| || || || |||| | Sbjct 113965 GCGCAGCATTGGCACCAACCCGTTCGAAATCCCATTCGTTCCGGAGATGTACGTTCCTTT 113906 Query 48458 AGCTC--TTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCA 48515 || | || | | | ||| | || ||||| || ||| ||| || || || ||| Sbjct 113905 GGCGCGAATACAGTGCACATT--CAGCCCGATACCGCCGGCCGATTTTGAAATCAGTGCA 113848 Query 48516 CACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAA 48575 ||| | || | || || || || || || ||||| || || |||| | | ||||| Sbjct 113847 CACTGCTTCAACGTGTCGTAGATACCCTCAATACTGTCGTCCGACATAGTAAGCAGAAAG 113788 Query 48576 CAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATA 48635 ||| || | ||||| | || | | ||| | || || || || || || Sbjct 113787 CAAGACGATAGCTGCGGGCGCTGCGTAGCGGCCGCAAACATGGTCGGTGAGGCGTGCGTA 113728 Query 48636 AACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGT 48695 || | ||| || | | || || || ||||| | | ||| || || | ||| Sbjct 113727 AAGTAGCGCTCCGAAAGTAGATTGTAAGTCTCAATTGCTGCATCGATGTCTTCTCCATGA 113668 Query 48696 ATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATT 48755 || || |||| || ||||| ||||| | ||| |||| ||| | |||||| || || Sbjct 113667 ATGCCGATAGCAACGCGCATCAACATGTGTTGCGGTCGTTCCGCGATTTTGCCCTTGATC 113608 Query 48756 TTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTA 48815 |||| | ||| ||| |||||||||||| || || |||||||||||| || || | Sbjct 113607 TTCAGCAAATAGGATCGTTCCAATGTTTTGAAGCCGAAATAGTTGTATCCGAAATCACGA 113548 Query 48816 TCATTAATAATTG 48828 || | |||||||| Sbjct 113547 TCGTAAATAATTG 113535 >seq569 Length=217393 Score = 84.2 bits (92), Expect = 2e-11 Identities = 171/254 (67%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011 ||||| | || || ||||| ||||| | ||||||||| | |||| || || || Sbjct 206406 AACATTAGGCACGCGAAATCGCAATGCAATCCCTCGTCGCGCGAAATCAGCTCGTTCGAG 206347 Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071 || || | || |||||||| |||| || || | |||||| || || ||||| || Sbjct 206346 AACGTCAGCCCGGGCATCAGGCCTCGCTTCTTCAGCCAGAAAATGGACGCAAAGCTACCG 206287 Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCA 19131 ||||| ||||| || || || ||||| || || | | ||| ||| | | || | Sbjct 206286 CTGAAGAAGATACCCTCGACGGCCGCAAACGCGACCACACGTTCGCCAAAGTTGGCCTTC 206227 Query 19132 TTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCT 19191 || | ||||| || || ||||| ||||||||||| || || || || | || || Sbjct 206226 TTGCTCGAGATCCAGTTAAGGGCCCAGTCAGCCTTCTTCTTCACGCACGGTAGCGTTTCG 206167 Query 19192 ATAGAATTAAATAG 19205 || | ||| || || Sbjct 206166 ATGGCATTGAACAG 206153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561753336447600