Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq1511 136 3e-27
seq654 136 3e-27
seq561 113 4e-20
seq843 100 2e-16
seq701 100 2e-16
seq98 91.5 1e-13
>seq1511
Length=84564
Score = 136 bits (150), Expect = 3e-27
Identities = 309/456 (68%), Gaps = 14/456 (3%)
Strand=Plus/Plus
Query 13652 TTGAATTTTCGTTTACAACCTTCAAAATTCATGTGTCGTATTTTACCATAGATTGGTCGC 13711
|||||||| || || || |||||| | ||||||| || || || || | ||| |||
Sbjct 80075 TTGAATTTGCGCTTGCACCCTTCATAGTTCATGTACCGAATCTTCCCGAAAATTTCACGC 80134
Query 13712 TCCATCCAGGCACGATCGTGAGTTCCGCATATTGACCACATGCAACCGGCATAACCGTTG 13771
||| ||||| | |||||||| | || || ||||||||||||||| | || |||||
Sbjct 80135 TCCTTCCAGCCTTGATCGTGAATGCCTGCGATCGACCACATGCAACCGACGTACCCGTTC 80194
Query 13772 GGATCGCGTCCATCCAAACTGTATTTGTCGTTGAAATATATGG-CGTTGATTAAAGC--- 13827
|||||||||||||||| ||||| ||||| | ||| |||| ||||| ||||
Sbjct 80195 GGATCGCGTCCATCCAGGCTGTACCGATCGTTCAGATAGATGGCCGTTG---CAAGCGCT 80251
Query 13828 CACTGTAGGCGAAATAGACCATTCTAATAtttttttAGCCCAATATATTCTCATATATCC 13887
|| | |||| | | ||| || | ||| ||||| ||||| || || |||| | | ||
Sbjct 80252 TCCTCT-GGCGTTTTGGTCCACTCCAGTATCTTTTTGGCCCAGTACATCCTCAAAAACCC 80310
Query 13888 GTGCATTTTGCCTTGCGTTTTAAGCTGTGTCTGAGCAGCGTTCCACAATATGTCATGAGT 13947
||||| || || | | | | ||| ||| || | |||||||| ||| || ||
Sbjct 80311 ATGCATCTTACCCTCCTTCACCATCTGCAGCTGTGCCGAGTTCCACAGATCGTCGTGCGT 80370
Query 13948 TTCGGAATTTTCTAATTCTCTTCTATTGTAACAATATTCCCGGCCTTCGTTTGCATGCAG 14007
|| || |||| | ||| || |||| ||||| |||| || || ||| |
Sbjct 80371 TTTGGCCGTTTCCAGCTCTTCCCTGCTGTAGCAATACCCCCGCTTATCCTTCCGATG--G 80428
Query 14008 ACT--CAACGTTTCTTTAGCCCAATCAGGCGCG-CCTTCAAACCGATCATAATTGATGTT 14064
|| || ||||| |||||||| |||| ||| || | | || || || ||||
Sbjct 80429 TCTTCCAGCGTTTTGCGGGCCCAATCGTACGCGCCCTGCAGATTG-TCGTAGTTTTTGTT 80487
Query 14065 GTAATAGCAAAAGTTGTCTGCCAATTCTCGTCGAAC 14100
|| | ||||||||||||| | || ||| || || ||
Sbjct 80488 GTGAAAGCAAAAGTTGTCGGACAGTTCGCGGCGCAC 80523
>seq654
Length=198528
Score = 136 bits (150), Expect = 3e-27
Identities = 309/456 (68%), Gaps = 14/456 (3%)
Strand=Plus/Minus
Query 13652 TTGAATTTTCGTTTACAACCTTCAAAATTCATGTGTCGTATTTTACCATAGATTGGTCGC 13711
|||||||| || || || || ||| | ||||||| || || || || | ||| |||
Sbjct 167104 TTGAATTTGCGCTTGCATCCCTCATAGTTCATGTACCGAATCTTCCCGAAAATTTCACGC 167045
Query 13712 TCCATCCAGGCACGATCGTGAGTTCCGCATATTGACCACATGCAACCGGCATAACCGTTG 13771
||| ||||| | |||||||| | ||| || ||||||||||||||| | || |||||
Sbjct 167044 TCCTTCCAGCCTTGATCGTGAATGCCGGCGATCGACCACATGCAACCGACGTACCCGTTC 166985
Query 13772 GGATCGCGTCCATCCAAACTGTATTTGTCGTTGAAATATATGG-CGTTGATTAAAGC--- 13827
|||||||||||||||| ||||| ||||| | ||| |||| ||||| ||||
Sbjct 166984 GGATCGCGTCCATCCAGGCTGTACCGATCGTTCAGATAGATGGCCGTTG---CAAGCGCT 166928
Query 13828 CACTGTAGGCGAAATAGACCATTCTAATAtttttttAGCCCAATATATTCTCATATATCC 13887
|| | |||| | | ||| || | ||| ||||| ||||| || || |||| | | ||
Sbjct 166927 TCCTCT-GGCGTTTTGGTCCACTCCAGTATCTTTTTGGCCCAGTACATCCTCAAAAACCC 166869
Query 13888 GTGCATTTTGCCTTGCGTTTTAAGCTGTGTCTGAGCAGCGTTCCACAATATGTCATGAGT 13947
||||| || || | | | | ||| ||| || | |||||||| ||| || ||
Sbjct 166868 ATGCATCTTACCCTCCTTCACCATCTGCAGCTGTGCCGAGTTCCACAGATCGTCGTGCGT 166809
Query 13948 TTCGGAATTTTCTAATTCTCTTCTATTGTAACAATATTCCCGGCCTTCGTTTGCATGCAG 14007
|| || |||| | ||| || |||| ||||| |||| || || ||| |
Sbjct 166808 TTTGGCCGTTTCCAGCTCTTCCCTGCTGTAGCAATACACCCGCTTATCCTTCCGATG--G 166751
Query 14008 ACT--CAACGTTTCTTTAGCCCAATCAGGCGCG-CCTTCAAACCGATCATAATTGATGTT 14064
|| || ||||| |||||||| |||| ||| || | | || || || ||||
Sbjct 166750 TCTTCCAGCGTTTTGCGGGCCCAATCGTACGCGCCCTGCAGATTG-TCGTAGTTTTTGTT 166692
Query 14065 GTAATAGCAAAAGTTGTCTGCCAATTCTCGTCGAAC 14100
|| | ||||||||||||| | || ||| || || ||
Sbjct 166691 GTGAAAGCAAAAGTTGTCGGACAGTTCGCGGCGCAC 166656
>seq561
Length=219668
Score = 113 bits (124), Expect = 4e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| ||||| ||||| || || || || || |||| | || | |||| ||||||||
Sbjct 140467 ATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCTTCCAATTG 140408
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || ||||| |||| |||||| ||||| || || || ||||| || || ||||| ||
Sbjct 140407 CTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCTTCCTTGTCCTGAATCTT 140348
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| ||| | || | ||||| || | ||| || || || |||| || || |||||
Sbjct 140347 GGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCCAGGGTGATGGTCTTTCCGGT 140288
Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470
| ||| || || || |||||||||
Sbjct 140287 CAGAGTCTTGACGAAGATCTGCATG 140263
>seq843
Length=160513
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|||||||| || || || || || ||||| |||| | || | | || |||| |||
Sbjct 68861 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGC 68920
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| || || |||| |||||| ||||||||||| ||||| || || || || || ||
Sbjct 68921 TTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGGATCTTC 68980
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | || || || | ||| || |||||||| | || || || ||
Sbjct 68981 GCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTACCCGTG 69040
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| ||||| || || ||||||||
Sbjct 69041 AGGGTTTTGACGAAGATCTGCAT 69063
>seq701
Length=187196
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|||||||| || || || || || ||||| |||| | || | | || |||| |||
Sbjct 176826 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGC 176767
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| || || |||| |||||| ||||||||||| ||||| || || || || || ||
Sbjct 176766 TTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGGATCTTC 176707
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | || || || | ||| || |||||||| | || || || ||
Sbjct 176706 GCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTACCCGTG 176647
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| ||||| || || ||||||||
Sbjct 176646 AGGGTTTTGACGAAGATCTGCAT 176624
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|||||||| || || || || || ||||| |||| | || | | || |||| |||
Sbjct 183595 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGC 183536
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| || || |||| |||||| ||||||||||| ||||| || || || || || ||
Sbjct 183535 TTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGGATCTTC 183476
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | || || || | ||| || |||||||| | || || || ||
Sbjct 183475 GCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTACCCGTG 183416
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| ||||| || || ||||||||
Sbjct 183415 AGGGTTTTGACGAAGATCTGCAT 183393
>seq98
Length=483913
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319
||| || |||||||| || || || || || ||||| |||| | ||| | |||| ||
Sbjct 465155 AACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCATCCTC 465096
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
| ||||| || || || ||||||||||| ||||| || ||||| || || || || ||
Sbjct 465095 AAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTG 465036
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
|| || || || | || | ||||| || | || || || || |||| || ||
Sbjct 465035 GATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTCGACCTCCAGCGTGATGGTCTT 464976
Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||| || | || || || || ||||||||
Sbjct 464975 GCCAGTCAGCGTCTTCACGAAGATCTGCAT 464946
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319
||| || |||||||| || || || || || ||||| |||| | ||| | |||| ||
Sbjct 465617 AACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGTCCATCCTC 465558
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
| ||||| || || || ||||||||||| ||||| || ||||| || || || || ||
Sbjct 465557 AAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTG 465498
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
|| || || || | || | ||||| || | || || || || |||| || ||
Sbjct 465497 GATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTCGACCTCCAGCGTGATGGTCTT 465438
Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||| || | || || || || ||||||||
Sbjct 465437 GCCAGTCAGCGTCTTCACGAAGATCTGCAT 465408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396034068360630
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |