Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1511 136 3e-27 seq654 136 3e-27 seq561 113 4e-20 seq843 100 2e-16 seq701 100 2e-16 seq98 91.5 1e-13 >seq1511 Length=84564 Score = 136 bits (150), Expect = 3e-27 Identities = 309/456 (68%), Gaps = 14/456 (3%) Strand=Plus/Plus Query 13652 TTGAATTTTCGTTTACAACCTTCAAAATTCATGTGTCGTATTTTACCATAGATTGGTCGC 13711 |||||||| || || || |||||| | ||||||| || || || || | ||| ||| Sbjct 80075 TTGAATTTGCGCTTGCACCCTTCATAGTTCATGTACCGAATCTTCCCGAAAATTTCACGC 80134 Query 13712 TCCATCCAGGCACGATCGTGAGTTCCGCATATTGACCACATGCAACCGGCATAACCGTTG 13771 ||| ||||| | |||||||| | || || ||||||||||||||| | || ||||| Sbjct 80135 TCCTTCCAGCCTTGATCGTGAATGCCTGCGATCGACCACATGCAACCGACGTACCCGTTC 80194 Query 13772 GGATCGCGTCCATCCAAACTGTATTTGTCGTTGAAATATATGG-CGTTGATTAAAGC--- 13827 |||||||||||||||| ||||| ||||| | ||| |||| ||||| |||| Sbjct 80195 GGATCGCGTCCATCCAGGCTGTACCGATCGTTCAGATAGATGGCCGTTG---CAAGCGCT 80251 Query 13828 CACTGTAGGCGAAATAGACCATTCTAATAtttttttAGCCCAATATATTCTCATATATCC 13887 || | |||| | | ||| || | ||| ||||| ||||| || || |||| | | || Sbjct 80252 TCCTCT-GGCGTTTTGGTCCACTCCAGTATCTTTTTGGCCCAGTACATCCTCAAAAACCC 80310 Query 13888 GTGCATTTTGCCTTGCGTTTTAAGCTGTGTCTGAGCAGCGTTCCACAATATGTCATGAGT 13947 ||||| || || | | | | ||| ||| || | |||||||| ||| || || Sbjct 80311 ATGCATCTTACCCTCCTTCACCATCTGCAGCTGTGCCGAGTTCCACAGATCGTCGTGCGT 80370 Query 13948 TTCGGAATTTTCTAATTCTCTTCTATTGTAACAATATTCCCGGCCTTCGTTTGCATGCAG 14007 || || |||| | ||| || |||| ||||| |||| || || ||| | Sbjct 80371 TTTGGCCGTTTCCAGCTCTTCCCTGCTGTAGCAATACCCCCGCTTATCCTTCCGATG--G 80428 Query 14008 ACT--CAACGTTTCTTTAGCCCAATCAGGCGCG-CCTTCAAACCGATCATAATTGATGTT 14064 || || ||||| |||||||| |||| ||| || | | || || || |||| Sbjct 80429 TCTTCCAGCGTTTTGCGGGCCCAATCGTACGCGCCCTGCAGATTG-TCGTAGTTTTTGTT 80487 Query 14065 GTAATAGCAAAAGTTGTCTGCCAATTCTCGTCGAAC 14100 || | ||||||||||||| | || ||| || || || Sbjct 80488 GTGAAAGCAAAAGTTGTCGGACAGTTCGCGGCGCAC 80523 >seq654 Length=198528 Score = 136 bits (150), Expect = 3e-27 Identities = 309/456 (68%), Gaps = 14/456 (3%) Strand=Plus/Minus Query 13652 TTGAATTTTCGTTTACAACCTTCAAAATTCATGTGTCGTATTTTACCATAGATTGGTCGC 13711 |||||||| || || || || ||| | ||||||| || || || || | ||| ||| Sbjct 167104 TTGAATTTGCGCTTGCATCCCTCATAGTTCATGTACCGAATCTTCCCGAAAATTTCACGC 167045 Query 13712 TCCATCCAGGCACGATCGTGAGTTCCGCATATTGACCACATGCAACCGGCATAACCGTTG 13771 ||| ||||| | |||||||| | ||| || ||||||||||||||| | || ||||| Sbjct 167044 TCCTTCCAGCCTTGATCGTGAATGCCGGCGATCGACCACATGCAACCGACGTACCCGTTC 166985 Query 13772 GGATCGCGTCCATCCAAACTGTATTTGTCGTTGAAATATATGG-CGTTGATTAAAGC--- 13827 |||||||||||||||| ||||| ||||| | ||| |||| ||||| |||| Sbjct 166984 GGATCGCGTCCATCCAGGCTGTACCGATCGTTCAGATAGATGGCCGTTG---CAAGCGCT 166928 Query 13828 CACTGTAGGCGAAATAGACCATTCTAATAtttttttAGCCCAATATATTCTCATATATCC 13887 || | |||| | | ||| || | ||| ||||| ||||| || || |||| | | || Sbjct 166927 TCCTCT-GGCGTTTTGGTCCACTCCAGTATCTTTTTGGCCCAGTACATCCTCAAAAACCC 166869 Query 13888 GTGCATTTTGCCTTGCGTTTTAAGCTGTGTCTGAGCAGCGTTCCACAATATGTCATGAGT 13947 ||||| || || | | | | ||| ||| || | |||||||| ||| || || Sbjct 166868 ATGCATCTTACCCTCCTTCACCATCTGCAGCTGTGCCGAGTTCCACAGATCGTCGTGCGT 166809 Query 13948 TTCGGAATTTTCTAATTCTCTTCTATTGTAACAATATTCCCGGCCTTCGTTTGCATGCAG 14007 || || |||| | ||| || |||| ||||| |||| || || ||| | Sbjct 166808 TTTGGCCGTTTCCAGCTCTTCCCTGCTGTAGCAATACACCCGCTTATCCTTCCGATG--G 166751 Query 14008 ACT--CAACGTTTCTTTAGCCCAATCAGGCGCG-CCTTCAAACCGATCATAATTGATGTT 14064 || || ||||| |||||||| |||| ||| || | | || || || |||| Sbjct 166750 TCTTCCAGCGTTTTGCGGGCCCAATCGTACGCGCCCTGCAGATTG-TCGTAGTTTTTGTT 166692 Query 14065 GTAATAGCAAAAGTTGTCTGCCAATTCTCGTCGAAC 14100 || | ||||||||||||| | || ||| || || || Sbjct 166691 GTGAAAGCAAAAGTTGTCGGACAGTTCGCGGCGCAC 166656 >seq561 Length=219668 Score = 113 bits (124), Expect = 4e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| ||||| ||||| || || || || || |||| | || | |||| |||||||| Sbjct 140467 ATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCTTCCAATTG 140408 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| |||| |||||| ||||| || || || ||||| || || ||||| || Sbjct 140407 CTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCTTCCTTGTCCTGAATCTT 140348 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | ||||| || | ||| || || || |||| || || ||||| Sbjct 140347 GGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCCAGGGTGATGGTCTTTCCGGT 140288 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 | ||| || || || ||||||||| Sbjct 140287 CAGAGTCTTGACGAAGATCTGCATG 140263 >seq843 Length=160513 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| || || || || || ||||| |||| | || | | || |||| ||| Sbjct 68861 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGC 68920 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| || || |||| |||||| ||||||||||| ||||| || || || || || || Sbjct 68921 TTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGGATCTTC 68980 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | || || || | ||| || |||||||| | || || || || Sbjct 68981 GCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTACCCGTG 69040 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||||| || || |||||||| Sbjct 69041 AGGGTTTTGACGAAGATCTGCAT 69063 >seq701 Length=187196 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| || || || || || ||||| |||| | || | | || |||| ||| Sbjct 176826 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGC 176767 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| || || |||| |||||| ||||||||||| ||||| || || || || || || Sbjct 176766 TTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGGATCTTC 176707 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | || || || | ||| || |||||||| | || || || || Sbjct 176706 GCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTACCCGTG 176647 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||||| || || |||||||| Sbjct 176646 AGGGTTTTGACGAAGATCTGCAT 176624 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| || || || || || ||||| |||| | || | | || |||| ||| Sbjct 183595 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGC 183536 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| || || |||| |||||| ||||||||||| ||||| || || || || || || Sbjct 183535 TTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGGATCTTC 183476 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | || || || | ||| || |||||||| | || || || || Sbjct 183475 GCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTACCCGTG 183416 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||||| || || |||||||| Sbjct 183415 AGGGTTTTGACGAAGATCTGCAT 183393 >seq98 Length=483913 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| || |||||||| || || || || || ||||| |||| | ||| | |||| || Sbjct 465155 AACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCATCCTC 465096 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 | ||||| || || || ||||||||||| ||||| || ||||| || || || || || Sbjct 465095 AAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTG 465036 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || || || | || | ||||| || | || || || || |||| || || Sbjct 465035 GATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTCGACCTCCAGCGTGATGGTCTT 464976 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||| || | || || || || |||||||| Sbjct 464975 GCCAGTCAGCGTCTTCACGAAGATCTGCAT 464946 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| || |||||||| || || || || || ||||| |||| | ||| | |||| || Sbjct 465617 AACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGTCCATCCTC 465558 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 | ||||| || || || ||||||||||| ||||| || ||||| || || || || || Sbjct 465557 AAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTG 465498 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || || || | || | ||||| || | || || || || |||| || || Sbjct 465497 GATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTCGACCTCCAGCGTGATGGTCTT 465438 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||| || | || || || || |||||||| Sbjct 465437 GCCAGTCAGCGTCTTCACGAAGATCTGCAT 465408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396034068360630