Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq906 109 7e-19 seq135 96.9 5e-15 >seq906 Length=150737 Score = 109 bits (120), Expect = 7e-19 Identities = 187/264 (71%), Gaps = 8/264 (3%) Strand=Plus/Minus Query 197023 AGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTCG 197082 ||||||||||| ||| |||||||||||||| || || | | ||| | ||| || Sbjct 3951 AGATCCTCGTCCGAAAACCCCGTACCGATCTTGCAGATCGTCTGATACTCTTCGTTCTCT 3892 Query 197083 GGATTGTAACAGGCGAGTAAGAAAG-CGCCGTAGGTTCCCGTTCTCTTTCCC--ACCCCG 197139 | ||| ||||| || |||||| | ||||| || || || | ||| ||| ||||| Sbjct 3891 TCGTCGTAGCAGGCCAG-CAGAAAGCCACCGTACGTGCCGGTACGCTTGCCCCGTCCCCG 3833 Query 197140 TTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTC 197199 | | || ||||| || |||| ||| || | |||| |||||| || || || ||| Sbjct 3832 --GTAACCCCCGATTACGACCAAATCGAGCGAATCGCCCACCCCGGTCAGATAGTCCTTC 3775 Query 197200 TTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGT-CCAG 197258 || ||||| |||||| | | |||| || ||||| ||||| ||||| || |||| | | Sbjct 3774 TTTAGTTTCAGCCAGTTGCGCGATCGTTTCGCAATTTCGTACGTTGC-TTCACGTGCTAA 3716 Query 197259 GGTCTTGATCATCAATCCCTCGCA 197282 ||| || | ||| || |||||||| Sbjct 3715 GGTTTTCACCATTAAGCCCTCGCA 3692 >seq135 Length=437591 Score = 96.9 bits (106), Expect = 5e-15 Identities = 184/264 (70%), Gaps = 8/264 (3%) Strand=Plus/Plus Query 197023 AGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTCG 197082 ||||||||||| ||| || ||||||||||| || || | | ||| | ||| || Sbjct 308658 AGATCCTCGTCCGAAAATCCGGTACCGATCTTGCAGATCGTCTGATACTCTTCGTTCTCT 308717 Query 197083 GGATTGTAACAGGCGAGTAAGAAAG-CGCCGTAGGTTCCCGTTCTCTTTCCC--ACCCCG 197139 | ||| ||||| || |||||| | ||||| || || || | ||| ||| ||||| Sbjct 308718 TCGTCGTAGCAGGCCAG-CAGAAAGCCACCGTACGTGCCGGTACGCTTGCCCCGTCCCCG 308776 Query 197140 TTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTC 197199 | | || ||||| || |||| ||| || | |||| |||||| || || || ||| Sbjct 308777 --GTAACCCCCGATTACGACCAAATCGAGCGAATCGCCCACCCCGGTCAGATAGTCCTTC 308834 Query 197200 TTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGT-CCAG 197258 || ||||| | |||| | | |||| || ||||| ||||| ||||| | |||| | | Sbjct 308835 TTTAGTTTCAACCAGTTGCGCGATCGTTTCGCAATTTCGTACGTTGC-CTCACGTGCTAA 308893 Query 197259 GGTCTTGATCATCAATCCCTCGCA 197282 ||| || | ||| || |||||||| Sbjct 308894 GGTTTTCACCATTAAGCCCTCGCA 308917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676301653119200