Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq310 141 6e-28 seq519 136 3e-26 seq561 93.3 3e-13 >seq310 Length=312542 Score = 141 bits (156), Expect = 6e-28 Identities = 366/553 (66%), Gaps = 10/553 (2%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||| | || |||||| | || || || ||||| ||||| | ||||| || | || || Sbjct 298331 GCAGTCGGCATTGATCTCGGCACGACCTACAGCTGTGTCGGTGTTTTCCAGCACGGCAAG 298272 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 |||||||| |||||||||||||| || || |||| || ||||| ||||| | || ||| Sbjct 298271 GTAGAAATCATTGCCAATGACCAGGGCAACCGAACCACGCCATCGTATGTGGCCTTCACT 298212 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || || | ||| || || |||||||| || | || | || || || || Sbjct 298211 GACACGGAGCGTCTGATCGGCGATGCTGCCAAGAACCAGGTGGCCATGAACCCGACCAAC 298152 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || || || || || || | |||| || || || ||||| ||| || | |||| | Sbjct 298151 ACCATCTTCGACGCGAAGCGTCTGATCGGCCGCAAATTTGACGATCCCGCCATCCAGGCC 298092 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG-- 474626 || ||| || ||||| || ||||| | | | || |||||| | || | | Sbjct 298091 GACATGAAGCACTGGCCATTCGAGGTGGAATCGATCGAGGGCAAACCAAAGATTGCGGTC 298032 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 | |||| | || || | || || | ||||| | | || ||||| | Sbjct 298031 GAGTACAAG--GGCGAGAAGAAGTGTTTCTTCCCGGAGGAGGTCAGCTCGATGGTGCTGA 297974 Query 474687 CCAAAATGAAACAAACCGC--GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAA 474743 |||| ||||| |||| || |||| | | ||| ||||| || || | || || | Sbjct 297973 CCAAGATGAAGGAAACGGCCGAAGCTTA---CCTGGGCAAGACGGTTACGAACGCTGTCA 297917 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 |||| || || || || || || ||||| || || || ||||| || ||||| |||| | Sbjct 297916 TTACCGTGCCCGCCTACTTCAACGATTCGCAGCGCCAGGCAACGAAGGATGCCGGAACCA 297857 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 || | || || || || | |||||||| || || || || || ||||| | || || | Sbjct 297856 TTTCCGGGCTGAACGTGCTGCGTATTATCAACGAGCCGACGGCGGCCGCCATCGCCTACG 297797 Query 474864 GTCTTGATAAGAA 474876 |||| || ||||| Sbjct 297796 GTCTGGACAAGAA 297784 >seq519 Length=235090 Score = 136 bits (150), Expect = 3e-26 Identities = 365/553 (66%), Gaps = 10/553 (2%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||| | || |||||| | || || || ||||| ||||| | ||||| || | || || Sbjct 209128 GCAGTCGGCATTGATCTCGGCACGACCTACAGCTGTGTCGGTGTTTTCCAGCACGGCAAG 209187 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 |||||||| |||||||||||||| || || |||| || ||||| ||||| | || ||| Sbjct 209188 GTAGAAATCATTGCCAATGACCAGGGCAACCGAACCACGCCATCGTATGTGGCCTTCACT 209247 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || || | ||| || || |||||||| || | || | || || || || Sbjct 209248 GACACGGAGCGTCTGATCGGCGATGCTGCCAAGAACCAGGTGGCCATGAACCCGACCAAC 209307 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || || || || || || | |||| || || || ||||| ||| || | | || | Sbjct 209308 ACCATCTTCGACGCGAAGCGTCTGATCGGCCGCAAATTTGACGATCCCGCCATTCAGGCC 209367 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG-- 474626 || ||| || ||||| || ||||| | | | || |||||| | || | | Sbjct 209368 GACATGAAGCACTGGCCGTTCGAGGTGGAATCGATCGAGGGCAAACCAAAGATTGCGGTC 209427 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 | |||| | || || | || || | ||||| | | || ||||| | Sbjct 209428 GAGTACAAG--GGCGAGAAGAAGTGTTTCTTCCCGGAGGAGGTCAGCTCGATGGTGCTGA 209485 Query 474687 CCAAAATGAAACAAACCGC--GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAA 474743 |||| ||||| |||| || |||| | | ||| ||||| || || | || || | Sbjct 209486 CCAAGATGAAGGAAACGGCCGAAGCTTA---CCTGGGCAAGACGGTTACGAACGCTGTCA 209542 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 |||| || || || || || || ||||| || || || ||||| || ||||| |||| | Sbjct 209543 TTACCGTGCCCGCCTACTTCAACGATTCGCAGCGCCAGGCAACGAAGGATGCCGGAACCA 209602 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 || | || || || || | |||||||| || || || || || ||||| | || || | Sbjct 209603 TTTCCGGGCTGAACGTGCTGCGTATTATCAACGAGCCGACGGCGGCCGCCATCGCCTACG 209662 Query 474864 GTCTTGATAAGAA 474876 |||| || ||||| Sbjct 209663 GTCTGGACAAGAA 209675 >seq561 Length=219668 Score = 93.3 bits (102), Expect = 3e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || ||||| || || ||| || || ||||| || | || || Sbjct 140029 ACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGT 139970 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| | ||||| || ||||| || ||||| || ||||| || || ||||| Sbjct 139969 GCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCC 139910 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||||||| |||||||| || ||| || || || || | || ||||| Sbjct 139909 TTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATTGTGTCGGATGGTTCGACCTCAAG 139850 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || ||||| |||||||| || || ||||| Sbjct 139849 GGTGATGGTCTTTCCGGTCAGAGTCTTCACAAAGATTTG 139811 Score = 93.3 bits (102), Expect = 3e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || ||||| || || ||| || || ||||| || | || || Sbjct 140485 ACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGT 140426 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| | |||||| || ||||| || ||||| || ||||| || || ||||| Sbjct 140425 GCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCC 140366 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||||||| |||||||| || ||| || || || || | || || || Sbjct 140365 TTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCCAG 140306 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || ||||| |||||||| ||||| || || Sbjct 140305 GGTGATGGTCTTTCCGGTCAGAGTCTTGACGAAGATCTG 140267 Score = 89.7 bits (98), Expect = 3e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || ||||| || || ||| || || ||||| || | || || Sbjct 140257 ACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGT 140198 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| | ||||| || ||||| || ||||| || ||||| || || ||||| Sbjct 140197 GCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCC 140138 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||||||| |||||||| || ||| || || || || | || ||||| Sbjct 140137 TTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCAAG 140078 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || ||||| || ||||| ||||| || || Sbjct 140077 GGTGATGGTCTTTCCGGTCAGCGTCTTGACGAAGATCTG 140039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3266009149437320