Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq310 141 6e-28
seq519 136 3e-26
seq561 93.3 3e-13
>seq310
Length=312542
Score = 141 bits (156), Expect = 6e-28
Identities = 366/553 (66%), Gaps = 10/553 (2%)
Strand=Plus/Minus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388
||| | || |||||| | || || || ||||| ||||| | ||||| || | || ||
Sbjct 298331 GCAGTCGGCATTGATCTCGGCACGACCTACAGCTGTGTCGGTGTTTTCCAGCACGGCAAG 298272
Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448
|||||||| |||||||||||||| || || |||| || ||||| ||||| | || |||
Sbjct 298271 GTAGAAATCATTGCCAATGACCAGGGCAACCGAACCACGCCATCGTATGTGGCCTTCACT 298212
Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508
|| || || | ||| || || |||||||| || | || | || || || ||
Sbjct 298211 GACACGGAGCGTCTGATCGGCGATGCTGCCAAGAACCAGGTGGCCATGAACCCGACCAAC 298152
Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568
|| || || || || || | |||| || || || ||||| ||| || | |||| |
Sbjct 298151 ACCATCTTCGACGCGAAGCGTCTGATCGGCCGCAAATTTGACGATCCCGCCATCCAGGCC 298092
Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG-- 474626
|| ||| || ||||| || ||||| | | | || |||||| | || | |
Sbjct 298091 GACATGAAGCACTGGCCATTCGAGGTGGAATCGATCGAGGGCAAACCAAAGATTGCGGTC 298032
Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686
| |||| | || || | || || | ||||| | | || ||||| |
Sbjct 298031 GAGTACAAG--GGCGAGAAGAAGTGTTTCTTCCCGGAGGAGGTCAGCTCGATGGTGCTGA 297974
Query 474687 CCAAAATGAAACAAACCGC--GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAA 474743
|||| ||||| |||| || |||| | | ||| ||||| || || | || || |
Sbjct 297973 CCAAGATGAAGGAAACGGCCGAAGCTTA---CCTGGGCAAGACGGTTACGAACGCTGTCA 297917
Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803
|||| || || || || || || ||||| || || || ||||| || ||||| |||| |
Sbjct 297916 TTACCGTGCCCGCCTACTTCAACGATTCGCAGCGCCAGGCAACGAAGGATGCCGGAACCA 297857
Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863
|| | || || || || | |||||||| || || || || || ||||| | || || |
Sbjct 297856 TTTCCGGGCTGAACGTGCTGCGTATTATCAACGAGCCGACGGCGGCCGCCATCGCCTACG 297797
Query 474864 GTCTTGATAAGAA 474876
|||| || |||||
Sbjct 297796 GTCTGGACAAGAA 297784
>seq519
Length=235090
Score = 136 bits (150), Expect = 3e-26
Identities = 365/553 (66%), Gaps = 10/553 (2%)
Strand=Plus/Plus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388
||| | || |||||| | || || || ||||| ||||| | ||||| || | || ||
Sbjct 209128 GCAGTCGGCATTGATCTCGGCACGACCTACAGCTGTGTCGGTGTTTTCCAGCACGGCAAG 209187
Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448
|||||||| |||||||||||||| || || |||| || ||||| ||||| | || |||
Sbjct 209188 GTAGAAATCATTGCCAATGACCAGGGCAACCGAACCACGCCATCGTATGTGGCCTTCACT 209247
Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508
|| || || | ||| || || |||||||| || | || | || || || ||
Sbjct 209248 GACACGGAGCGTCTGATCGGCGATGCTGCCAAGAACCAGGTGGCCATGAACCCGACCAAC 209307
Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568
|| || || || || || | |||| || || || ||||| ||| || | | || |
Sbjct 209308 ACCATCTTCGACGCGAAGCGTCTGATCGGCCGCAAATTTGACGATCCCGCCATTCAGGCC 209367
Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG-- 474626
|| ||| || ||||| || ||||| | | | || |||||| | || | |
Sbjct 209368 GACATGAAGCACTGGCCGTTCGAGGTGGAATCGATCGAGGGCAAACCAAAGATTGCGGTC 209427
Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686
| |||| | || || | || || | ||||| | | || ||||| |
Sbjct 209428 GAGTACAAG--GGCGAGAAGAAGTGTTTCTTCCCGGAGGAGGTCAGCTCGATGGTGCTGA 209485
Query 474687 CCAAAATGAAACAAACCGC--GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAA 474743
|||| ||||| |||| || |||| | | ||| ||||| || || | || || |
Sbjct 209486 CCAAGATGAAGGAAACGGCCGAAGCTTA---CCTGGGCAAGACGGTTACGAACGCTGTCA 209542
Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803
|||| || || || || || || ||||| || || || ||||| || ||||| |||| |
Sbjct 209543 TTACCGTGCCCGCCTACTTCAACGATTCGCAGCGCCAGGCAACGAAGGATGCCGGAACCA 209602
Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863
|| | || || || || | |||||||| || || || || || ||||| | || || |
Sbjct 209603 TTTCCGGGCTGAACGTGCTGCGTATTATCAACGAGCCGACGGCGGCCGCCATCGCCTACG 209662
Query 474864 GTCTTGATAAGAA 474876
|||| || |||||
Sbjct 209663 GTCTGGACAAGAA 209675
>seq561
Length=219668
Score = 93.3 bits (102), Expect = 3e-13
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| ||||| || || ||||| || || ||| || || ||||| || | || ||
Sbjct 140029 ACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGT 139970
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| |||||| | ||||| || ||||| || ||||| || ||||| || || |||||
Sbjct 139969 GCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCC 139910
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
||||||||| |||||||| || ||| || || || || | || |||||
Sbjct 139909 TTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATTGTGTCGGATGGTTCGACCTCAAG 139850
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||| || || || ||||| |||||||| || || |||||
Sbjct 139849 GGTGATGGTCTTTCCGGTCAGAGTCTTCACAAAGATTTG 139811
Score = 93.3 bits (102), Expect = 3e-13
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| ||||| || || ||||| || || ||| || || ||||| || | || ||
Sbjct 140485 ACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGT 140426
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| |||||| | |||||| || ||||| || ||||| || ||||| || || |||||
Sbjct 140425 GCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCC 140366
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
||||||||| |||||||| || ||| || || || || | || || ||
Sbjct 140365 TTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCCAG 140306
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||| || || || ||||| |||||||| ||||| || ||
Sbjct 140305 GGTGATGGTCTTTCCGGTCAGAGTCTTGACGAAGATCTG 140267
Score = 89.7 bits (98), Expect = 3e-12
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| ||||| || || ||||| || || ||| || || ||||| || | || ||
Sbjct 140257 ACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGT 140198
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| |||||| | ||||| || ||||| || ||||| || ||||| || || |||||
Sbjct 140197 GCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCC 140138
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
||||||||| |||||||| || ||| || || || || | || |||||
Sbjct 140137 TTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCAAG 140078
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||| || || || ||||| || ||||| ||||| || ||
Sbjct 140077 GGTGATGGTCTTTCCGGTCAGCGTCTTGACGAAGATCTG 140039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3266009149437320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |