Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq148 161 1e-34 >seq148 Length=432849 Score = 161 bits (178), Expect = 1e-34 Identities = 351/521 (67%), Gaps = 6/521 (1%) Strand=Plus/Minus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 || |||||||| || ||||| || || ||| || || | ||| | |||||| || || Sbjct 17129 CCGGTGGCAATTACGAAATCTTCCGGCGTTTCCTGCTGCATCATAAGCCACATCGCTTCC 17070 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAG 47907 || || ||| |||| || ||||||||||| | || ||||| || || | | | | Sbjct 17069 ACGTAGTCTTTGGCGTGGCCCCAGTCACGTTTCGAGTCCAGATTACCCAGCTCCAGATAC 17010 Query 47908 TCTTGCTTACCTTCAGAGATTGCTTTT--AATGCTCTTGTAATCTTACGAGTTACAAAAG 47965 || |||| || || || |||| | | | |||||||| || || || ||| Sbjct 17009 TCCTGCTGGCCGAGTGAAAT--CTTTGCCACCGAACGGGTAATCTTGCGTGTAACGAAAT 16952 Query 47966 TTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGT 48025 |||| || || | || ||||| || ||||| |||||||| |||| || |||| || Sbjct 16951 TTTCTCCCCGACGCGGCGATTCGTGGTTAAAGAGAATACCGTTACAAGCGAACATATTGT 16892 Query 48026 ATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACAC-CATAAGGA 48084 | | ||| || ||||| | || |||||||| || || | || ||| ||| | || || Sbjct 16891 ACGCTTCGCGGTAGTTTATCACAATCCAGTATCCGTACATCTTGGCA-CACGCGTACGGT 16833 Query 48085 GAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGT 48144 || || |||||||| ||||| | || |||| || || || |||||| || || ||| Sbjct 16832 GACCGGGGATAGAACGGTGTCTTTTCGTTCTGGGGCGTTTCCACCACCTTGCCGTACAGT 16773 Query 48145 TCACTGGTGGATGCTTGATAGATACGAACCCTATCTTCCATCTCAAGCAAACGGACTGCC 48204 || |||||||| ||||||| || ||| | | |||| | | | ||||| || Sbjct 16772 TCCGACGTGGATGCCTGATAGAAGCGGACCGTCTTTTCCTGCCCCACAGTACGGATGGCA 16713 Query 48205 TCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAAC 48264 || |||| | || || || | ||||| || | || || ||| || || ||| Sbjct 16712 TCGAGCAGCCGGAGCGTTCCGACAGCATCCACCTCGGCCGTGTATTCGCTCAAATCGAAC 16653 Query 48265 GAAACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTC 48305 |||| || || ||||| || || | ||||||||||| || Sbjct 16652 GAAATTTTCACGTGACTTTGGGCGGCTAGATTATAAATTTC 16612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665073557978800