Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq9915 129 7e-24 seq5667 129 7e-24 seq5428 129 7e-24 seq1541 122 1e-21 seq982 114 2e-19 seq569 113 6e-19 seq368 87.8 2e-11 >seq9915 Length=2510 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||| ||||| || ||||| ||||| | || Sbjct 2455 GCTTGGCCAGCTCACCAGGCAGCAGCAGGCGGACGGCCGTTTGGATTTCGCGGGACGTGA 2396 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| ||||||||| |||||||||| ||| || |||| | |||| || |||| | Sbjct 2395 TCGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGACGCTTCGGCGGCGATACGCTCGAAGA 2336 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||| ||||| |||| ||| || || ||| |||| Sbjct 2335 TGTCGTTCACGAAACTGTTCATGATGCTCATCGCCTTGGAGGAAATACCGGTGTCCGGGT 2276 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| | ||||||||||||| Sbjct 2275 GGACCTGCTTCAACACCTTGTAGATG 2250 >seq5667 Length=4896 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||| ||||| || ||||| ||||| | || Sbjct 2762 GCTTGGCCAGCTCACCAGGCAGCAGCAGGCGGACGGCCGTTTGGATTTCGCGGGACGTGA 2703 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| ||||||||| |||||||||| ||| || |||| | |||| || |||| | Sbjct 2702 TCGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGACGCTTCGGCGGCGATACGCTCGAAGA 2643 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||| ||||| |||| ||| || || ||| |||| Sbjct 2642 TGTCGTTCACGAAACTGTTCATGATGCTCATCGCCTTGGAGGAAATACCGGTGTCCGGGT 2583 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| | ||||||||||||| Sbjct 2582 GGACCTGCTTCAACACCTTGTAGATG 2557 >seq5428 Length=5017 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||| ||||| || ||||| ||||| | || Sbjct 3094 GCTTGGCCAGCTCACCAGGCAGCAGCAGGCGGACGGCCGTTTGGATTTCGCGGGACGTGA 3153 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| ||||||||| |||||||||| ||| || |||| | |||| || |||| | Sbjct 3154 TCGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGACGCTTCGGCGGCGATACGCTCGAAGA 3213 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||| ||||| |||| ||| || || ||| |||| Sbjct 3214 TGTCGTTCACGAAACTGTTCATGATGCTCATCGCCTTGGAGGAAATACCGGTGTCCGGGT 3273 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| | ||||||||||||| Sbjct 3274 GGACCTGCTTCAACACCTTGTAGATG 3299 >seq1541 Length=81579 Score = 122 bits (134), Expect = 1e-21 Identities = 166/229 (72%), Gaps = 11/229 (5%) Strand=Plus/Minus Query 869173 ATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCC 869232 |||| | || |||||||| |||| ||||| || | || |||||||| ||||| Sbjct 59703 ATGCAATCCCTCGTCGCGCGAAATCAGCTCGTTCGAGAACGTCAGCCCGGGCATCAGGCC 59644 Query 869233 GCGCTTCTTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGG 869291 |||||||| ||||| || |||| |||| || ||||| ||| ||||| |||||||||| Sbjct 59643 ACGCTTCTTCAGCCAGAAAATGGACGCA-AAGCTGCCGCTGAAGAAGATACCCTCGACGG 59585 Query 869292 CGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTT---GATCCACT 869348 | ||||| ||| | || ||| ||||| | | ||| |||| | |||||| | Sbjct 59584 CAGCAAACGCGACCACACGTTCGCCAAAGTT------GGCCTTCTTGCTCGAGATCCAGT 59531 Query 869349 TCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGC 869397 | | |||||||||||||| ||| |||| |||| | ||| |||||||| Sbjct 59530 TAAGGGCCCAGTCGGCCTTCTTCTTCACGCACGGTAGCGTTTCGATGGC 59482 >seq982 Length=141235 Score = 114 bits (126), Expect = 2e-19 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 1592108 AAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCACC 1592167 ||||||||||| |||||| ||||||| || || | || || ||| ||| Sbjct 14718 AAGCGCACCGATGACATCAGTTCGTGGGATGCCGATTTCCTGAAGGTGGACCAGGGCACA 14777 Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 || || ||| ||||||| || || ||||| | ||||| ||| ||||| ||| | | Sbjct 14778 CTGTTCGAGCTGATCCTGGCGGCGAACTATTTGGACATTAAGGGCCTGCTGGATGTGACG 14837 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 |||||| | || || ||||||||||||||||| | || || ||||| |||||||| || Sbjct 14838 TGCAAGACGGTTGCGAACATGATCAAGGGCAAAACCCCGGAAGAGATTCGCAAGACGTTC 14897 Query 1592288 AACATCAAGTACG 1592300 ||||||||| ||| Sbjct 14898 AACATCAAGAACG 14910 >seq569 Length=217393 Score = 113 bits (124), Expect = 6e-19 Identities = 164/229 (72%), Gaps = 11/229 (5%) Strand=Plus/Minus Query 869173 ATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCC 869232 |||| | || |||||||| |||| ||||| || | || |||||||| ||||| Sbjct 206383 ATGCAATCCCTCGTCGCGCGAAATCAGCTCGTTCGAGAACGTCAGCCCGGGCATCAGGCC 206324 Query 869233 GCGCTTCTTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGG 869291 |||||||| ||||| || |||| |||| || || || ||| ||||| |||||||||| Sbjct 206323 TCGCTTCTTCAGCCAGAAAATGGACGCA-AAGCTACCGCTGAAGAAGATACCCTCGACGG 206265 Query 869292 CGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTT---GATCCACT 869348 | ||||| ||| | || ||| ||||| | | ||| |||| | |||||| | Sbjct 206264 CCGCAAACGCGACCACACGTTCGCCAAAGTT------GGCCTTCTTGCTCGAGATCCAGT 206211 Query 869349 TCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGC 869397 | | |||||||| ||||| ||| |||| |||| | ||| |||||||| Sbjct 206210 TAAGGGCCCAGTCAGCCTTCTTCTTCACGCACGGTAGCGTTTCGATGGC 206162 >seq368 Length=285863 Score = 87.8 bits (96), Expect = 2e-11 Identities = 165/243 (68%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||| || ||||| || ||||| | ||| | ||||| ||||| ||||| | ||||| || Sbjct 113998 CTGATCCACGTACCGTGCCGTATTGTTGTAAACGCGCAGCATTGGCACCAACCCGTTCGA 113939 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 || || || || | | ||| | || |||||| | |||| | | || Sbjct 113938 AATCCCATTCGTTCCGGAGATGTACGTTCCTTTGGCGCGAATACAGTGCACATTCAGCCC 113879 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| ||||||||||| || || || || || ||||| || | |||||||||||| ||||| Sbjct 113878 GATACCGCCGGCCGATTTTGAAATCAGTGCACACTGCTTCAACGTGTCGTAGATACCCTC 113819 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || |||| || ||| | |||||||| ||||| |||||| || ||| | Sbjct 113818 AATACTGTCGTCCGACATAGTAAGCAGAAAGCAAGACGATAGCTGCGGGCGCTGCGTAGC 113759 Query 1630305 GGC 1630307 ||| Sbjct 113758 GGC 113756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6102987547687030