Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq4546 102 6e-17
seq1866 102 6e-17
seq1693 102 6e-17
>seq4546
Length=6469
Score = 102 bits (112), Expect = 6e-17
Identities = 113/151 (75%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 103857 AGGATTGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGATGGCCGAAGCCGGATTCTACT 103916
|||||||||| | ||||| || || || || || || ||| ||||| || | ||
Sbjct 5723 AGGATTGGCCGACGTCGCTGAAGCAAAAGCCACAGCAGTTGAGCGATGCCGGCTTTTTCT 5782
Query 103917 ACACCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGGATTGGG 103976
|||||||| | ||||| ||| ||||| ||||| ||||||| ||||||| ||||
Sbjct 5783 ACACCGGCAAGAGCGATCGGGTGAAGTGCTTTAGCTGCGGCGGTGGTTTAAAGGACTGGG 5842
Query 103977 AGCACGATGATGAGCCGTGGCAACAACACGC 104007
|||| ||||||||||| ||| |||| |||||
Sbjct 5843 AGCAGGATGATGAGCCCTGGGAACAGCACGC 5873
Score = 95.1 bits (104), Expect = 1e-14
Identities = 108/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 103857 AGGATTGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGATGGCCGAAGCCGGATTCTACT 103916
|||||||||| | ||||| || || || || || || ||| ||||| || | ||
Sbjct 146 AGGATTGGCCGACGTCGCTGAAGCAAAAGCCACAGCAGTTGAGCGATGCCGGCTTTTTCT 87
Query 103917 ACACCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGGATTGGG 103976
|||||||| | ||||| ||| ||||| ||||| ||||||| ||||||| ||||
Sbjct 86 ACACCGGCAAGAGCGATCGGGTGAAGTGCTTTAGCTGCGGCGGTGGTTTAAAGGACTGGG 27
Query 103977 AGCACGATGATGAGCCGTGGCAACA 104001
|||| ||||||||||| ||| ||||
Sbjct 26 AGCAGGATGATGAGCCCTGGGAACA 2
>seq1866
Length=60733
Score = 102 bits (112), Expect = 6e-17
Identities = 113/151 (75%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 103857 AGGATTGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGATGGCCGAAGCCGGATTCTACT 103916
|||||||||| | ||||| || || || || || || ||| ||||| || | ||
Sbjct 19356 AGGATTGGCCGACGTCGCTGAAGCAAAAGCCACAGCAGTTGAGCGATGCCGGCTTTTTCT 19297
Query 103917 ACACCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGGATTGGG 103976
|||||||| | ||||| ||| ||||| ||||| ||||||| ||||||| ||||
Sbjct 19296 ACACCGGCAAGAGCGATCGGGTGAAGTGCTTTAGCTGCGGCGGTGGTTTAAAGGACTGGG 19237
Query 103977 AGCACGATGATGAGCCGTGGCAACAACACGC 104007
|||| ||||||||||| ||| |||| |||||
Sbjct 19236 AGCAGGATGATGAGCCCTGGGAACAGCACGC 19206
>seq1693
Length=70527
Score = 102 bits (112), Expect = 6e-17
Identities = 113/151 (75%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 103857 AGGATTGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGATGGCCGAAGCCGGATTCTACT 103916
|||||||||| | ||||| || || || || || || ||| ||||| || | ||
Sbjct 19000 AGGATTGGCCGACGTCGCTGAAGCAAAAGCCACAGCAGTTGAGCGATGCCGGCTTTTTCT 18941
Query 103917 ACACCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGGATTGGG 103976
|||||||| | ||||| ||| ||||| ||||| ||||||| ||||||| ||||
Sbjct 18940 ACACCGGCAAGAGCGATCGGGTGAAGTGCTTTAGCTGCGGCGGTGGTTTAAAGGACTGGG 18881
Query 103977 AGCACGATGATGAGCCGTGGCAACAACACGC 104007
|||| ||||||||||| ||| |||| |||||
Sbjct 18880 AGCAGGATGATGAGCCCTGGGAACAGCACGC 18850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398630866276510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |