Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq4546 102 6e-17 seq1866 102 6e-17 seq1693 102 6e-17 >seq4546 Length=6469 Score = 102 bits (112), Expect = 6e-17 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 103857 AGGATTGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGATGGCCGAAGCCGGATTCTACT 103916 |||||||||| | ||||| || || || || || || ||| ||||| || | || Sbjct 5723 AGGATTGGCCGACGTCGCTGAAGCAAAAGCCACAGCAGTTGAGCGATGCCGGCTTTTTCT 5782 Query 103917 ACACCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGGATTGGG 103976 |||||||| | ||||| ||| ||||| ||||| ||||||| ||||||| |||| Sbjct 5783 ACACCGGCAAGAGCGATCGGGTGAAGTGCTTTAGCTGCGGCGGTGGTTTAAAGGACTGGG 5842 Query 103977 AGCACGATGATGAGCCGTGGCAACAACACGC 104007 |||| ||||||||||| ||| |||| ||||| Sbjct 5843 AGCAGGATGATGAGCCCTGGGAACAGCACGC 5873 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 103857 AGGATTGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGATGGCCGAAGCCGGATTCTACT 103916 |||||||||| | ||||| || || || || || || ||| ||||| || | || Sbjct 146 AGGATTGGCCGACGTCGCTGAAGCAAAAGCCACAGCAGTTGAGCGATGCCGGCTTTTTCT 87 Query 103917 ACACCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGGATTGGG 103976 |||||||| | ||||| ||| ||||| ||||| ||||||| ||||||| |||| Sbjct 86 ACACCGGCAAGAGCGATCGGGTGAAGTGCTTTAGCTGCGGCGGTGGTTTAAAGGACTGGG 27 Query 103977 AGCACGATGATGAGCCGTGGCAACA 104001 |||| ||||||||||| ||| |||| Sbjct 26 AGCAGGATGATGAGCCCTGGGAACA 2 >seq1866 Length=60733 Score = 102 bits (112), Expect = 6e-17 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 103857 AGGATTGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGATGGCCGAAGCCGGATTCTACT 103916 |||||||||| | ||||| || || || || || || ||| ||||| || | || Sbjct 19356 AGGATTGGCCGACGTCGCTGAAGCAAAAGCCACAGCAGTTGAGCGATGCCGGCTTTTTCT 19297 Query 103917 ACACCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGGATTGGG 103976 |||||||| | ||||| ||| ||||| ||||| ||||||| ||||||| |||| Sbjct 19296 ACACCGGCAAGAGCGATCGGGTGAAGTGCTTTAGCTGCGGCGGTGGTTTAAAGGACTGGG 19237 Query 103977 AGCACGATGATGAGCCGTGGCAACAACACGC 104007 |||| ||||||||||| ||| |||| ||||| Sbjct 19236 AGCAGGATGATGAGCCCTGGGAACAGCACGC 19206 >seq1693 Length=70527 Score = 102 bits (112), Expect = 6e-17 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 103857 AGGATTGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGATGGCCGAAGCCGGATTCTACT 103916 |||||||||| | ||||| || || || || || || ||| ||||| || | || Sbjct 19000 AGGATTGGCCGACGTCGCTGAAGCAAAAGCCACAGCAGTTGAGCGATGCCGGCTTTTTCT 18941 Query 103917 ACACCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGGATTGGG 103976 |||||||| | ||||| ||| ||||| ||||| ||||||| ||||||| |||| Sbjct 18940 ACACCGGCAAGAGCGATCGGGTGAAGTGCTTTAGCTGCGGCGGTGGTTTAAAGGACTGGG 18881 Query 103977 AGCACGATGATGAGCCGTGGCAACAACACGC 104007 |||| ||||||||||| ||| |||| ||||| Sbjct 18880 AGCAGGATGATGAGCCCTGGGAACAGCACGC 18850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398630866276510