Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq98 143 5e-29 seq2250 134 3e-26 seq561 134 3e-26 seq654 129 1e-24 seq1511 120 6e-22 >seq98 Length=483913 Score = 143 bits (158), Expect = 5e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||| | || ||| || || ||||||| || || || ||||| || || || || | Sbjct 464718 TACCTCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGG 464659 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | || || || || || ||||| || ||||| | | || |||||||||| Sbjct 464658 ACAGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAG 464599 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| || || ||||| || || || || || ||||| || ||| || | Sbjct 464598 GAATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAAGGCTCGA 464539 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || |||||||| ||||||||||| ||||| || ||||| Sbjct 464538 CCTCCAACGTGATGGTCTTGCCAGTCAACGTCTTCACAAAGATTTGCAT 464490 Score = 138 bits (152), Expect = 2e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||| | || ||| || || ||||||| || || || ||||| || || || || | Sbjct 464946 TACCTCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGG 464887 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | || || || || || ||||| || ||||| | | || |||||||||| Sbjct 464886 ACAGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAG 464827 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| || || ||||| || || || || || ||||| || ||| || | Sbjct 464826 GAATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAAGGCTCGA 464767 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || |||||||| |||| |||||| || || |||||||| Sbjct 464766 CCTCCAACGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 464718 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| ||||| || || || || ||||| || || || || || ||| | | || Sbjct 465160 CGAAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCA 465101 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || ||||| || ||||| | | || ||||||||||| || || ||||| Sbjct 465100 TCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTG 465041 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||| || || || || || ||||| || || || || |||| || || Sbjct 465040 TCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTCGACCTCCAGCGTGATG 464981 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| |||| |||||| || || |||||||| Sbjct 464980 GTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 464946 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| ||||| || || || || ||||| || || || || || ||| | | || Sbjct 465622 CGAAGAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGTCCA 465563 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || ||||| || ||||| | | || ||||||||||| || || ||||| Sbjct 465562 TCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTG 465503 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||| || || || || || ||||| || || || || |||| || || Sbjct 465502 TCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTCGACCTCCAGCGTGATG 465443 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| |||| |||||| || || |||||||| Sbjct 465442 GTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 465408 >seq2250 Length=42400 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 ||||| || | || || || ||||| ||||| || || || || || || | | ||| Sbjct 17052 CGCAGCACCAGATGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCA 16993 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| || || || || |||||||| || | || ||||||||||| |||||||||||| Sbjct 16992 TCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGAATTCCTTCCTTA 16933 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||| ||||| ||||| || ||||| || || || || || | || || Sbjct 16932 TCCTGGATCTTGGCTTTCACATTCTCGATCGTGTCCGATGGCTCGACCTCGAGTGTGATG 16873 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 |||||||| || | || || || || |||||||| ||| Sbjct 16872 GTCTTGCCCGTGAGTGTTTTCACGAAAATCTGCATGATT 16834 >seq561 Length=219668 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || |||||| || | || || || ||||| ||||| || ||||| || || Sbjct 140490 CCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAC 140431 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||| ||||| | ||| || || |||||||| || | || ||||| || || Sbjct 140430 AGGGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGG 140371 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| || |||||||| || || ||||| || || || || ||||| || Sbjct 140370 ATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACC 140311 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || ||||| || |||| ||||| || || |||||||| Sbjct 140310 TCCAGGGTGATGGTCTTTCCGGTCAGAGTCTTGACGAAGATCTGCAT 140264 Score = 131 bits (144), Expect = 3e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || |||||| || | || || || ||||| ||||| || ||||| || || Sbjct 140262 CCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAC 140203 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||| ||||| | || || || |||||||| || | || ||||| || || Sbjct 140202 AGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGG 140143 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| || |||||||| || || ||||| || || || || ||||| || Sbjct 140142 ATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACC 140083 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || ||||| || |||| |||||| || || |||||||| Sbjct 140082 TCAAGGGTGATGGTCTTTCCGGTCAGCGTCTTGACGAAGATCTGCAT 140036 Score = 127 bits (140), Expect = 4e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || |||||| || | || || || ||||| ||||| || ||||| || || Sbjct 140034 CCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAC 139975 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||| ||||| | || || || |||||||| || | || ||||| || || Sbjct 139974 AGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGG 139915 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| || |||||||| || || ||||| || || || || ||||| || Sbjct 139914 ATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATTGTGTCGGATGGTTCGACC 139855 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || | || || ||||| || |||| ||||| ||||| || |||||| Sbjct 139854 TCAAGGGTGATGGTCTTTCCGGTCAGAGTCTTCACAAAGATTTGCATT 139807 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || ||||| || | || || || ||||| ||||| || ||||| || || Sbjct 140718 CCACCACGCAGACGCAAGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAC 140659 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||| ||||| | || || || |||||||| || | || |||||||| || Sbjct 140658 AGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGGGGG 140599 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| || |||||||| || || ||||| || || || || ||||| || Sbjct 140598 ATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACC 140539 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || ||||| || |||| ||||| || || |||||||| Sbjct 140538 TCAAGGGTGATGGTCTTTCCGGTCAGTGTCTTGACGAAGATCTGCAT 140492 >seq654 Length=198528 Score = 129 bits (142), Expect = 1e-24 Identities = 210/297 (71%), Gaps = 8/297 (3%) Strand=Plus/Plus Query 198312 CTCGAAAAGGCGGAAACACATGACCCTCTATGGAATGCATCGCAAATACAGATGATAAGA 198371 || |||| ||| |||| || ||| ||| ||||| | | || | |||||| | | Sbjct 166794 CTGGAAACGGCCAAAACGCACGACGATCTGTGGAACTCGGCACAGCTGCAGATGGTGAAG 166853 Query 198372 GAAGGAAAAATGCATAGTTTTTTAAGAATGTACTGGGCTAAAAAGATACTTGAATGGACA 198431 || || || |||||| | ||||| || ||||||||||| ||||||||||| || ||||| Sbjct 166854 GAGGGTAAGATGCATGGGTTTTTGAGGATGTACTGGGCCAAAAAGATACTGGAGTGGACC 166913 Query 198432 AGAACACCGGAAGA--CGCTTTGAGTTATAG-TATCTATCTAAACAATAAGTACGAACTA 198488 | ||| || || || ||||| | | | |||||||| ||| || |||| || Sbjct 166914 AAAACGCCAGAGGAAGCGCTT---GCAACGGCCATCTATCTGAACGATCGGTACAGCCTG 166970 Query 198489 GACGGCACG-GATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACATGA 198547 || || ||| ||||| ||||| ||||| ||||| |||||||| || ||| | || || Sbjct 166971 GATGG-ACGCGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCCGGCATTCACGA 167029 Query 198548 TCGAGCGTGGAAAGAAAGACCTATATTTGGGAAGATAAGATATATGAATTATGAGGG 198604 || || ||||| || | || || |||||||| | || ||||| |||||||| Sbjct 167030 TCAAGGCTGGAAGGAGCGTGAAATTTTCGGGAAGATTCGGTACATGAACTATGAGGG 167086 >seq1511 Length=84564 Score = 120 bits (132), Expect = 6e-22 Identities = 208/297 (70%), Gaps = 8/297 (3%) Strand=Plus/Minus Query 198312 CTCGAAAAGGCGGAAACACATGACCCTCTATGGAATGCATCGCAAATACAGATGATAAGA 198371 || |||| ||| |||| || ||| ||| ||||| | | || | |||||| | | Sbjct 80385 CTGGAAACGGCCAAAACGCACGACGATCTGTGGAACTCGGCACAGCTGCAGATGGTGAAG 80326 Query 198372 GAAGGAAAAATGCATAGTTTTTTAAGAATGTACTGGGCTAAAAAGATACTTGAATGGACA 198431 || || || |||||| | ||||| || ||||||||||| ||||||||||| || ||||| Sbjct 80325 GAGGGTAAGATGCATGGGTTTTTGAGGATGTACTGGGCCAAAAAGATACTGGAGTGGACC 80266 Query 198432 AGAACACCGGAAGA--CGCTTTGAGTTATAG-TATCTATCTAAACAATAAGTACGAACTA 198488 | ||| || || || ||||| | | | |||||||| ||| || |||| || Sbjct 80265 AAAACGCCAGAGGAAGCGCTT---GCAACGGCCATCTATCTGAACGATCGGTACAGCCTG 80209 Query 198489 GACGGCACG-GATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACATGA 198547 || || ||| ||||| ||||| ||||| ||||| |||||||| || || | || || Sbjct 80208 GATGG-ACGCGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCAGGCATTCACGA 80150 Query 198548 TCGAGCGTGGAAAGAAAGACCTATATTTGGGAAGATAAGATATATGAATTATGAGGG 198604 || || ||||| || | || || |||||||| | || ||||| ||||| || Sbjct 80149 TCAAGGCTGGAAGGAGCGTGAAATTTTCGGGAAGATTCGGTACATGAACTATGAAGG 80093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981190794950010