Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq654 122 2e-22 seq1511 116 7e-21 >seq654 Length=198528 Score = 122 bits (134), Expect = 2e-22 Identities = 206/293 (70%), Gaps = 4/293 (1%) Strand=Plus/Plus Query 182995 CTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGA 183054 || |||| ||| |||| || ||| ||| ||||| | |||| | |||||| ||| Sbjct 166794 CTGGAAACGGCCAAAACGCACGACGATCTGTGGAACTCGGCACAGCTGCAGATGGTGAAG 166853 Query 183055 GAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACA 183114 || || || |||||| | ||||| | ||||||||||| ||||||||||| || ||||| Sbjct 166854 GAGGGTAAGATGCATGGGTTTTTGAGGATGTACTGGGCCAAAAAGATACTGGAGTGGACC 166913 Query 183115 AGAACTCCGGAAGATGCTTTGAGTTATAG-TATCTATATGAACAATAAGTACGAACTAGA 183173 | ||| || || || || | | | | |||||| ||||| || |||| || || Sbjct 166914 AAAACGCCAGAGGAAGCGCT-TGCAACGGCCATCTATCTGAACGATCGGTACAGCCTGGA 166972 Query 183174 CGGTACG-GATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATA 183232 || ||| ||||| ||||| ||||| ||||| |||||||| || ||| | |||||| Sbjct 166973 TGG-ACGCGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCCGGCATTCACGATC 167031 Query 183233 GAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTATGAG 183285 || ||||| || | || || || ||||| | || ||||| |||||| Sbjct 167032 AAGGCTGGAAGGAGCGTGAAATTTTCGGGAAGATTCGGTACATGAACTATGAG 167084 >seq1511 Length=84564 Score = 116 bits (128), Expect = 7e-21 Identities = 204/292 (70%), Gaps = 4/292 (1%) Strand=Plus/Minus Query 182995 CTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGA 183054 || |||| ||| |||| || ||| ||| ||||| | |||| | |||||| ||| Sbjct 80385 CTGGAAACGGCCAAAACGCACGACGATCTGTGGAACTCGGCACAGCTGCAGATGGTGAAG 80326 Query 183055 GAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACA 183114 || || || |||||| | ||||| | ||||||||||| ||||||||||| || ||||| Sbjct 80325 GAGGGTAAGATGCATGGGTTTTTGAGGATGTACTGGGCCAAAAAGATACTGGAGTGGACC 80266 Query 183115 AGAACTCCGGAAGATGCTTTGAGTTATAG-TATCTATATGAACAATAAGTACGAACTAGA 183173 | ||| || || || || | | | | |||||| ||||| || |||| || || Sbjct 80265 AAAACGCCAGAGGAAGCGCT-TGCAACGGCCATCTATCTGAACGATCGGTACAGCCTGGA 80207 Query 183174 CGGTACG-GATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATA 183232 || ||| ||||| ||||| ||||| ||||| |||||||| || || | |||||| Sbjct 80206 TGG-ACGCGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCAGGCATTCACGATC 80148 Query 183233 GAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTATGA 183284 || ||||| || | || || || ||||| | || ||||| ||||| Sbjct 80147 AAGGCTGGAAGGAGCGTGAAATTTTCGGGAAGATTCGGTACATGAACTATGA 80096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902839905342400