Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq654 122 2e-22
seq1511 116 7e-21
>seq654
Length=198528
Score = 122 bits (134), Expect = 2e-22
Identities = 206/293 (70%), Gaps = 4/293 (1%)
Strand=Plus/Plus
Query 182995 CTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGA 183054
|| |||| ||| |||| || ||| ||| ||||| | |||| | |||||| |||
Sbjct 166794 CTGGAAACGGCCAAAACGCACGACGATCTGTGGAACTCGGCACAGCTGCAGATGGTGAAG 166853
Query 183055 GAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACA 183114
|| || || |||||| | ||||| | ||||||||||| ||||||||||| || |||||
Sbjct 166854 GAGGGTAAGATGCATGGGTTTTTGAGGATGTACTGGGCCAAAAAGATACTGGAGTGGACC 166913
Query 183115 AGAACTCCGGAAGATGCTTTGAGTTATAG-TATCTATATGAACAATAAGTACGAACTAGA 183173
| ||| || || || || | | | | |||||| ||||| || |||| || ||
Sbjct 166914 AAAACGCCAGAGGAAGCGCT-TGCAACGGCCATCTATCTGAACGATCGGTACAGCCTGGA 166972
Query 183174 CGGTACG-GATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATA 183232
|| ||| ||||| ||||| ||||| ||||| |||||||| || ||| | ||||||
Sbjct 166973 TGG-ACGCGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCCGGCATTCACGATC 167031
Query 183233 GAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTATGAG 183285
|| ||||| || | || || || ||||| | || ||||| ||||||
Sbjct 167032 AAGGCTGGAAGGAGCGTGAAATTTTCGGGAAGATTCGGTACATGAACTATGAG 167084
>seq1511
Length=84564
Score = 116 bits (128), Expect = 7e-21
Identities = 204/292 (70%), Gaps = 4/292 (1%)
Strand=Plus/Minus
Query 182995 CTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGA 183054
|| |||| ||| |||| || ||| ||| ||||| | |||| | |||||| |||
Sbjct 80385 CTGGAAACGGCCAAAACGCACGACGATCTGTGGAACTCGGCACAGCTGCAGATGGTGAAG 80326
Query 183055 GAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACA 183114
|| || || |||||| | ||||| | ||||||||||| ||||||||||| || |||||
Sbjct 80325 GAGGGTAAGATGCATGGGTTTTTGAGGATGTACTGGGCCAAAAAGATACTGGAGTGGACC 80266
Query 183115 AGAACTCCGGAAGATGCTTTGAGTTATAG-TATCTATATGAACAATAAGTACGAACTAGA 183173
| ||| || || || || | | | | |||||| ||||| || |||| || ||
Sbjct 80265 AAAACGCCAGAGGAAGCGCT-TGCAACGGCCATCTATCTGAACGATCGGTACAGCCTGGA 80207
Query 183174 CGGTACG-GATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATA 183232
|| ||| ||||| ||||| ||||| ||||| |||||||| || || | ||||||
Sbjct 80206 TGG-ACGCGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCAGGCATTCACGATC 80148
Query 183233 GAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTATGA 183284
|| ||||| || | || || || ||||| | || ||||| |||||
Sbjct 80147 AAGGCTGGAAGGAGCGTGAAATTTTCGGGAAGATTCGGTACATGAACTATGA 80096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 902839905342400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |