Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq98 96.9 8e-15
seq843 93.3 1e-13
seq701 93.3 1e-13
seq561 93.3 1e-13
>seq98
Length=483913
Score = 96.9 bits (106), Expect = 8e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| ||||| || || || || ||||| |||| || || || ||||| ||||
Sbjct 464961 AAGACGCTGACTGGCAAGACCATCACGCTGGAGGTCGAGCCCTCGGACACGATCGAGAAC 465020
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || ||| || || || | | ||||||
Sbjct 465021 GTGAAGGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAGCAGCGTTTGATCTTC 465080
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||||||| | || |||||| | ||| || |||| |||||| ||||||| |||||
Sbjct 465081 GCCGGAAAGCAGCTTGAGGATGGACGTACTCTGTCCGACTACAACATCCAGAAGGAGTCG 465140
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|| |||||| | ||| | |||||||
Sbjct 465141 ACCCTTCACTTGGTTCTTCGACTTCG 465166
Score = 93.3 bits (102), Expect = 1e-13
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| ||||| || || || || ||||| |||| || || || ||||| ||||
Sbjct 465423 AAGACGCTGACTGGCAAGACCATCACGCTGGAGGTCGAGCCCTCGGACACGATCGAGAAC 465482
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || ||| || || || | | ||||||
Sbjct 465483 GTGAAGGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAGCAGCGTTTGATCTTC 465542
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||||||| | || |||||| | ||| || |||| |||||| | ||||| |||||
Sbjct 465543 GCCGGAAAGCAGCTTGAGGATGGACGTACTCTGTCCGACTACAACATTCAGAAGGAGTCG 465602
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|| |||||| | ||| | |||||||
Sbjct 465603 ACCCTTCACTTGGTTCTTCGACTTCG 465628
Score = 89.7 bits (98), Expect = 1e-12
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| ||||| || || || || ||||| ||||| || || ||| ||||| ||||
Sbjct 464733 AAGACGCTGACTGGCAAGACCATCACGTTGGAGGTCGAGCCTTCGGACACGATCGAGAAC 464792
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || ||| || || || | | ||||||
Sbjct 464793 GTGAAGGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAGCAGCGTTTGATCTTC 464852
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||||||| | || |||||| | ||| || |||| |||||| ||||||| |||||
Sbjct 464853 GCCGGAAAGCAGCTTGAGGATGGACGTACTCTGTCCGACTACAACATCCAGAAGGAGTCG 464912
Query 206365 AC 206366
||
Sbjct 464913 AC 464914
Score = 86.0 bits (94), Expect = 1e-11
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| ||| | || || || || ||||| ||||| || || ||| ||||| ||||
Sbjct 464505 AAGACGTTGACTGGCAAGACCATCACGTTGGAGGTCGAGCCTTCGGACACGATCGAGAAC 464564
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || ||| || || || | | ||||||
Sbjct 464565 GTGAAGGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAGCAGCGTTTGATCTTC 464624
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||||||| | || |||||| | ||| || |||| |||||| ||||||| |||||
Sbjct 464625 GCCGGAAAGCAGCTTGAGGATGGACGTACTCTGTCCGACTACAACATCCAGAAGGAGTCG 464684
Query 206365 AC 206366
||
Sbjct 464685 AC 464686
Score = 86.0 bits (94), Expect = 1e-11
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||||| | ||| | |||||| || ||||| ||||||| || ||||| | || |||
Sbjct 465166 CGAAGTCGAAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTA 465107
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
| |||||| || |||||||||||||||||||| | || || |||
Sbjct 465106 CGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGA 465062
>seq843
Length=160513
Score = 93.3 bits (102), Expect = 1e-13
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || |||||| ||||| || || || || ||| | || || ||| || ||
Sbjct 69060 CAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACTCTTGAGGTCGAACCATCGGAT 69001
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || || || || ||| || ||
Sbjct 69000 ACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGATCAGCAG 68941
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| |||| || ||| | || || |||| |||||| ||
Sbjct 68940 CGTCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTACAACATC 68881
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || |||||||| ||
Sbjct 68880 CAGAAGGAGTCGACCCTTCACCTGGT 68855
>seq701
Length=187196
Score = 93.3 bits (102), Expect = 1e-13
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || |||||| ||||| || || || || ||| | || || ||| || ||
Sbjct 176627 CAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACTCTTGAGGTCGAACCATCGGAT 176686
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || || || || ||| || ||
Sbjct 176687 ACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGATCAGCAG 176746
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| |||| || ||| | || || |||| |||||| ||
Sbjct 176747 CGTCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTACAACATC 176806
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || |||||||| ||
Sbjct 176807 CAGAAGGAGTCGACCCTTCACCTGGT 176832
Score = 93.3 bits (102), Expect = 1e-13
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || |||||| ||||| || || || || ||| | || || ||| || ||
Sbjct 183396 CAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACTCTTGAGGTCGAACCATCGGAT 183455
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || || || || ||| || ||
Sbjct 183456 ACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGATCAGCAG 183515
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| |||| || ||| | || || |||| |||||| ||
Sbjct 183516 CGTCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTACAACATC 183575
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || |||||||| ||
Sbjct 183576 CAGAAGGAGTCGACCCTTCACCTGGT 183601
>seq561
Length=219668
Score = 93.3 bits (102), Expect = 1e-13
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| ||||| || ||||| || ||||| | || || ||| || |||
Sbjct 140039 CAGATCTTCGTCAAGACGCTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCCGAC 140098
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| |||||||| || || |||||||| ||||| ||
Sbjct 140099 ACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCAGCAG 140158
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| ||||| ||||||||||||||||| | || || |||| || ||| |
Sbjct 140159 CGTCTGATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAACATT 140218
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| || || || || || || ||
Sbjct 140219 CAGAAGGAATCCACCCTCCATCTGGT 140244
Score = 89.7 bits (98), Expect = 1e-12
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || ||||| || ||||| | || || ||| || |||||| ||||
Sbjct 139823 AAGACTCTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCCGACACAATCGAGAAT 139882
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| |||||||| || || |||||||| ||||| || | || |||||
Sbjct 139883 GTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCAGCAGCGTCTGATCTTT 139942
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| ||||||||||||||||| | || || |||| || ||| | ||||| || ||
Sbjct 139943 GCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAACATTCAGAAGGAATCC 140002
Query 206365 ACTCTTCACCTTGT 206378
|| || || || ||
Sbjct 140003 ACCCTCCATCTGGT 140016
Score = 87.8 bits (96), Expect = 4e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || ||||| || ||||| |||| || ||| || |||
Sbjct 140267 CAGATCTTCGTCAAGACTCTGACCGGAAAGACCATCACCCTGGAGGTCGAACCATCCGAC 140326
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| |||||||| || || |||||||| ||||| ||
Sbjct 140327 ACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCAGCAG 140386
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| ||||| ||||| ||||||||||| | || || |||| || ||| |
Sbjct 140387 CGTCTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACCCTGTCCGACTATAACATT 140446
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| || || || || || || ||
Sbjct 140447 CAGAAGGAATCCACCCTCCATCTGGT 140472
Score = 87.8 bits (96), Expect = 4e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || ||||| || ||||| | || || ||| || |||
Sbjct 140495 CAGATCTTCGTCAAGACACTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCCGAC 140554
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| |||||||| || || |||||||| || || ||
Sbjct 140555 ACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCAGATCAGCAG 140614
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| ||||| ||||||||||||||||| | || || |||| || ||| |
Sbjct 140615 CGTCTCATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAACATT 140674
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| || || || || || || || ||| | || ||
Sbjct 140675 CAGAAGGAATCCACCCTCCATCTGGTCTTGCGTCTGCG 140712
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181054762223390
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |