Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq98 96.9 8e-15 seq843 93.3 1e-13 seq701 93.3 1e-13 seq561 93.3 1e-13 >seq98 Length=483913 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||||| || || || || ||||| |||| || || || ||||| |||| Sbjct 464961 AAGACGCTGACTGGCAAGACCATCACGCTGGAGGTCGAGCCCTCGGACACGATCGAGAAC 465020 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || ||| || || || | | |||||| Sbjct 465021 GTGAAGGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAGCAGCGTTTGATCTTC 465080 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||||||| | || |||||| | ||| || |||| |||||| ||||||| ||||| Sbjct 465081 GCCGGAAAGCAGCTTGAGGATGGACGTACTCTGTCCGACTACAACATCCAGAAGGAGTCG 465140 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || |||||| | ||| | ||||||| Sbjct 465141 ACCCTTCACTTGGTTCTTCGACTTCG 465166 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||||| || || || || ||||| |||| || || || ||||| |||| Sbjct 465423 AAGACGCTGACTGGCAAGACCATCACGCTGGAGGTCGAGCCCTCGGACACGATCGAGAAC 465482 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || ||| || || || | | |||||| Sbjct 465483 GTGAAGGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAGCAGCGTTTGATCTTC 465542 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||||||| | || |||||| | ||| || |||| |||||| | ||||| ||||| Sbjct 465543 GCCGGAAAGCAGCTTGAGGATGGACGTACTCTGTCCGACTACAACATTCAGAAGGAGTCG 465602 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || |||||| | ||| | ||||||| Sbjct 465603 ACCCTTCACTTGGTTCTTCGACTTCG 465628 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||||| || || || || ||||| ||||| || || ||| ||||| |||| Sbjct 464733 AAGACGCTGACTGGCAAGACCATCACGTTGGAGGTCGAGCCTTCGGACACGATCGAGAAC 464792 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || ||| || || || | | |||||| Sbjct 464793 GTGAAGGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAGCAGCGTTTGATCTTC 464852 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||||||| | || |||||| | ||| || |||| |||||| ||||||| ||||| Sbjct 464853 GCCGGAAAGCAGCTTGAGGATGGACGTACTCTGTCCGACTACAACATCCAGAAGGAGTCG 464912 Query 206365 AC 206366 || Sbjct 464913 AC 464914 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||| | || || || || ||||| ||||| || || ||| ||||| |||| Sbjct 464505 AAGACGTTGACTGGCAAGACCATCACGTTGGAGGTCGAGCCTTCGGACACGATCGAGAAC 464564 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || ||| || || || | | |||||| Sbjct 464565 GTGAAGGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAGCAGCGTTTGATCTTC 464624 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||||||| | || |||||| | ||| || |||| |||||| ||||||| ||||| Sbjct 464625 GCCGGAAAGCAGCTTGAGGATGGACGTACTCTGTCCGACTACAACATCCAGAAGGAGTCG 464684 Query 206365 AC 206366 || Sbjct 464685 AC 464686 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||| | ||| | |||||| || ||||| ||||||| || ||||| | || ||| Sbjct 465166 CGAAGTCGAAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTA 465107 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | |||||| || |||||||||||||||||||| | || || ||| Sbjct 465106 CGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGA 465062 >seq843 Length=160513 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| ||||| || || || || ||| | || || ||| || || Sbjct 69060 CAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACTCTTGAGGTCGAACCATCGGAT 69001 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || || ||| || || Sbjct 69000 ACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGATCAGCAG 68941 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| |||||| |||| || ||| | || || |||| |||||| || Sbjct 68940 CGTCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTACAACATC 68881 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || |||||||| || Sbjct 68880 CAGAAGGAGTCGACCCTTCACCTGGT 68855 >seq701 Length=187196 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| ||||| || || || || ||| | || || ||| || || Sbjct 176627 CAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACTCTTGAGGTCGAACCATCGGAT 176686 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || || ||| || || Sbjct 176687 ACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGATCAGCAG 176746 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| |||||| |||| || ||| | || || |||| |||||| || Sbjct 176747 CGTCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTACAACATC 176806 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || |||||||| || Sbjct 176807 CAGAAGGAGTCGACCCTTCACCTGGT 176832 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| ||||| || || || || ||| | || || ||| || || Sbjct 183396 CAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACTCTTGAGGTCGAACCATCGGAT 183455 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || || ||| || || Sbjct 183456 ACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGATCAGCAG 183515 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| |||||| |||| || ||| | || || |||| |||||| || Sbjct 183516 CGTCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTACAACATC 183575 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || |||||||| || Sbjct 183576 CAGAAGGAGTCGACCCTTCACCTGGT 183601 >seq561 Length=219668 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| ||||| || ||||| || ||||| | || || ||| || ||| Sbjct 140039 CAGATCTTCGTCAAGACGCTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCCGAC 140098 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || |||||||| ||||| || Sbjct 140099 ACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCAGCAG 140158 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| ||||| ||||||||||||||||| | || || |||| || ||| | Sbjct 140159 CGTCTGATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAACATT 140218 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| || || || || || || || Sbjct 140219 CAGAAGGAATCCACCCTCCATCTGGT 140244 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || ||||| || ||||| | || || ||| || |||||| |||| Sbjct 139823 AAGACTCTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCCGACACAATCGAGAAT 139882 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || |||||||| ||||| || | || ||||| Sbjct 139883 GTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCAGCAGCGTCTGATCTTT 139942 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| ||||||||||||||||| | || || |||| || ||| | ||||| || || Sbjct 139943 GCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAACATTCAGAAGGAATCC 140002 Query 206365 ACTCTTCACCTTGT 206378 || || || || || Sbjct 140003 ACCCTCCATCTGGT 140016 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || ||||| || ||||| |||| || ||| || ||| Sbjct 140267 CAGATCTTCGTCAAGACTCTGACCGGAAAGACCATCACCCTGGAGGTCGAACCATCCGAC 140326 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || |||||||| ||||| || Sbjct 140327 ACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCAGCAG 140386 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| ||||| ||||| ||||||||||| | || || |||| || ||| | Sbjct 140387 CGTCTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACCCTGTCCGACTATAACATT 140446 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| || || || || || || || Sbjct 140447 CAGAAGGAATCCACCCTCCATCTGGT 140472 Score = 87.8 bits (96), Expect = 4e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || ||||| || ||||| | || || ||| || ||| Sbjct 140495 CAGATCTTCGTCAAGACACTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCCGAC 140554 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || |||||||| || || || Sbjct 140555 ACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCAGATCAGCAG 140614 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| ||||| ||||||||||||||||| | || || |||| || ||| | Sbjct 140615 CGTCTCATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAACATT 140674 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| || || || || || || || ||| | || || Sbjct 140675 CAGAAGGAATCCACCCTCCATCTGGTCTTGCGTCTGCG 140712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181054762223390