Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1559 122 1e-22 seq109 122 1e-22 >seq1559 Length=79761 Score = 122 bits (134), Expect = 1e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || || || || | ||||| ||| ||||| ||||||||||| |||||||| Sbjct 22964 CTTCAGTCCAGTGACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAA 23023 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || |||| ||| | || |||| | ||| |||| ||||| || ||||| || || Sbjct 23024 CGGTACGCCCAAGCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATC 23083 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGC 147161 || ||| ||||||| || ||||||||||||||| |||||| ||| | ||| | Sbjct 23084 AGCAACGAAAAACTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGA 23143 Query 147162 GGGGTTCCAGGC 147173 || ||||| || Sbjct 23144 AGGATTCCAAGC 23155 >seq109 Length=460762 Score = 122 bits (134), Expect = 1e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || || || || | ||||| ||| ||||| ||||||||||| |||||||| Sbjct 284478 CTTCAGTCCAGTGACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAA 284419 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || |||| ||| | || |||| | ||| |||| ||||| || ||||| || || Sbjct 284418 CGGTACGCCCAAGCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATC 284359 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGC 147161 || ||| ||||||| || ||||||||||||||| |||||| ||| | ||| | Sbjct 284358 AGCAACGAAAAACTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGA 284299 Query 147162 GGGGTTCCAGGC 147173 || ||||| || Sbjct 284298 AGGATTCCAAGC 284287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583119016776000