Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq5667 132 7e-25
seq5428 132 7e-25
seq9915 127 3e-23
seq1541 114 2e-19
seq569 104 3e-16
>seq5667
Length=4896
Score = 132 bits (146), Expect = 7e-25
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||||||| | |||||||| ||||| |||| | |||||||| | |
Sbjct 2558 ATCTACAAGGTGTTGAAGCAGGTCCACCCGGACACCGGTATT---TCCTCCAA---GGCG 2611
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| ||||||||| || || |||||||| |||| || |||| | |||| ||
Sbjct 2612 ATGAGCATCATGAACAGTTTCGTGAACGACATCTTCGAGCGTATCGCCGCCGAAGCGTCC 2671
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|||||||||| || |||||||||| |||||| | ||||| ||||| || |||||
Sbjct 2672 CGCCTGGCGCACTACAACAAGCGCTCGACGATCACGTCCCGCGAAATCCAAACGGCCGTC 2731
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|||||| | ||| || || ||||||| ||||||||||||||| || ||
Sbjct 2732 CGCCTGCTGCTGCCTGGTGAGCTGGCCAAGCACGCCGTCTCCGAAGGAAC 2781
>seq5428
Length=5017
Score = 132 bits (146), Expect = 7e-25
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||||||| | |||||||| ||||| |||| | |||||||| | |
Sbjct 3298 ATCTACAAGGTGTTGAAGCAGGTCCACCCGGACACCGGTATT---TCCTCCAA---GGCG 3245
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| ||||||||| || || |||||||| |||| || |||| | |||| ||
Sbjct 3244 ATGAGCATCATGAACAGTTTCGTGAACGACATCTTCGAGCGTATCGCCGCCGAAGCGTCC 3185
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|||||||||| || |||||||||| |||||| | ||||| ||||| || |||||
Sbjct 3184 CGCCTGGCGCACTACAACAAGCGCTCGACGATCACGTCCCGCGAAATCCAAACGGCCGTC 3125
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|||||| | ||| || || ||||||| ||||||||||||||| || ||
Sbjct 3124 CGCCTGCTGCTGCCTGGTGAGCTGGCCAAGCACGCCGTCTCCGAAGGAAC 3075
>seq9915
Length=2510
Score = 127 bits (140), Expect = 3e-23
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||||||| | |||||||| ||||| |||| | |||||||| | |
Sbjct 2251 ATCTACAAGGTGTTGAAGCAGGTCCACCCGGACACCGGTATT---TCCTCCAA---GGCG 2304
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| ||||||||| || || |||||||| |||| || |||| | |||| ||
Sbjct 2305 ATGAGCATCATGAACAGTTTCGTGAACGACATCTTCGAGCGTATCGCCGCCGAAGCGTCC 2364
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|||||||||| || |||||||||| |||||| | ||||| ||||| || |||||
Sbjct 2365 CGCCTGGCGCACTACAACAAGCGCTCGACGATCACGTCCCGCGAAATCCAAACGGCCGTC 2424
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|||||| | ||| || || ||||||| |||||||||||| || || ||
Sbjct 2425 CGCCTGCTGCTGCCTGGTGAGCTGGCCAAGCACGCCGTCTCGGAAGGAAC 2474
>seq1541
Length=81579
Score = 114 bits (126), Expect = 2e-19
Identities = 139/185 (75%), Gaps = 11/185 (6%)
Strand=Plus/Plus
Query 1456096 GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATC--- 1456152
|||||||| ||| | |||| |||| ||| |||||||||||||| | || ||||||
Sbjct 59482 GCCATCGAAACGCTACCGTGCGTGAAGAAGAAGGCCGACTGGGCCCTTAACTGGATCTCG 59541
Query 1456153 AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCA 1456211
| |||| ||| | |||||| ||| || | |||| ||||| | ||||||||| |
Sbjct 59542 AGCAAGAAGGCC-----AACTTTGGCGAACGTGTGGTCGCGTTTGCTGCCGTCGAGGGTA 59596
Query 1456212 TCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCC 1456270
|||| ||| ||||| || |||| |||| || ||||| |||||||| ||||| ||||||
Sbjct 59597 TCTTCTTCAGCGGCAGCTT-TGCGTCCATTTTCTGGCTGAAGAAGCGTGGCCTGATGCCC 59655
Query 1456271 GGTCT 1456275
|| ||
Sbjct 59656 GGGCT 59660
Score = 109 bits (120), Expect = 8e-18
Identities = 195/279 (70%), Gaps = 7/279 (3%)
Strand=Plus/Plus
Query 1455796 AGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT--CGGCGCCGACACGGTCCA 1455853
||||||| || ||||||||||||| || ||||| ||||| || | |||| | |
Sbjct 59116 AGGCCGAAGCATCCTTTTGGACCGTGGAAGAGGTGGACCTATCGAAG--GACATGAAGGA 59173
Query 1455854 CTGGGTGTCGCTGAGCGACGA-CGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTC 1455912
||||| || ||| | ||| ||| || ||||||||| |||||| || ||||| |||
Sbjct 59174 CTGGGACGCGTTGAA-GCCGAGCGAACGTCATTTCATCTCGCACGTGCTGGCCTTCTTT- 59231
Query 1455913 GCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAA 1455972
|| || |||||||||||| ||| || |||| | ||||| | | || || ||
Sbjct 59232 GCTGCGTCTGATGGCATCGTGAACGAAAATCTGGTGGAACGCTTCAGCCAGGAAGTGCAG 59291
Query 1455973 TTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAA 1456032
| | |||||||| | || ||||| || ||||| || || ||||| | || ||
Sbjct 59292 GTAACGGAGGCACGCTGCTTCTACGGCTTTCAGATTGCGATGGAAAATGTGCATAGCGAG 59351
Query 1456033 ACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
| |||||||| |||||||| || ||| || |||| ||
Sbjct 59352 ATGTACTCGCTGCTGATCGATACGTACATCCGGGACTCG 59390
>seq569
Length=217393
Score = 104 bits (114), Expect = 3e-16
Identities = 194/279 (70%), Gaps = 7/279 (3%)
Strand=Plus/Plus
Query 1455796 AGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC--TCGGCGCCGACACGGTCCA 1455853
||||||| || ||||||||||||| || ||||| |||| ||| | |||| | |
Sbjct 205793 AGGCCGAAGCATCCTTTTGGACCGTGGAAGAGGTGGACCTATCGAAG--GACATGAAGGA 205850
Query 1455854 CTGGGTGTCGCTGAGCGACGA-CGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTC 1455912
||||| || ||| | ||| ||| || ||||||||| |||||| || ||||| |||
Sbjct 205851 CTGGGACGCGTTGA-AGCCGAGCGAACGTCATTTCATCTCGCACGTGCTGGCCTTCTTT- 205908
Query 1455913 GCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAA 1455972
|| || |||||||| ||| ||| || |||| | ||||| | | || || ||
Sbjct 205909 GCTGCGTCTGATGGCATTGTGAACGAAAATCTGGTGGAACGCTTCAGCCAGGAAGTGCAG 205968
Query 1455973 TTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAA 1456032
| | |||||||| | || ||||| || ||||| || || ||||| | || ||
Sbjct 205969 GTAACGGAGGCACGCTGCTTCTACGGCTTTCAGATTGCGATGGAAAATGTGCATAGCGAG 206028
Query 1456033 ACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
| |||||||| |||||||| || ||| || |||| ||
Sbjct 206029 ATGTACTCGCTGCTGATCGATACGTACATCCGGGACTCG 206067
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7172931701515580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |