Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq5667 132 7e-25 seq5428 132 7e-25 seq9915 127 3e-23 seq1541 114 2e-19 seq569 104 3e-16 >seq5667 Length=4896 Score = 132 bits (146), Expect = 7e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||| | |||||||| ||||| |||| | |||||||| | | Sbjct 2558 ATCTACAAGGTGTTGAAGCAGGTCCACCCGGACACCGGTATT---TCCTCCAA---GGCG 2611 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || || |||||||| |||| || |||| | |||| || Sbjct 2612 ATGAGCATCATGAACAGTTTCGTGAACGACATCTTCGAGCGTATCGCCGCCGAAGCGTCC 2671 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 |||||||||| || |||||||||| |||||| | ||||| ||||| || ||||| Sbjct 2672 CGCCTGGCGCACTACAACAAGCGCTCGACGATCACGTCCCGCGAAATCCAAACGGCCGTC 2731 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 |||||| | ||| || || ||||||| ||||||||||||||| || || Sbjct 2732 CGCCTGCTGCTGCCTGGTGAGCTGGCCAAGCACGCCGTCTCCGAAGGAAC 2781 >seq5428 Length=5017 Score = 132 bits (146), Expect = 7e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||| | |||||||| ||||| |||| | |||||||| | | Sbjct 3298 ATCTACAAGGTGTTGAAGCAGGTCCACCCGGACACCGGTATT---TCCTCCAA---GGCG 3245 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || || |||||||| |||| || |||| | |||| || Sbjct 3244 ATGAGCATCATGAACAGTTTCGTGAACGACATCTTCGAGCGTATCGCCGCCGAAGCGTCC 3185 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 |||||||||| || |||||||||| |||||| | ||||| ||||| || ||||| Sbjct 3184 CGCCTGGCGCACTACAACAAGCGCTCGACGATCACGTCCCGCGAAATCCAAACGGCCGTC 3125 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 |||||| | ||| || || ||||||| ||||||||||||||| || || Sbjct 3124 CGCCTGCTGCTGCCTGGTGAGCTGGCCAAGCACGCCGTCTCCGAAGGAAC 3075 >seq9915 Length=2510 Score = 127 bits (140), Expect = 3e-23 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||| | |||||||| ||||| |||| | |||||||| | | Sbjct 2251 ATCTACAAGGTGTTGAAGCAGGTCCACCCGGACACCGGTATT---TCCTCCAA---GGCG 2304 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || || |||||||| |||| || |||| | |||| || Sbjct 2305 ATGAGCATCATGAACAGTTTCGTGAACGACATCTTCGAGCGTATCGCCGCCGAAGCGTCC 2364 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 |||||||||| || |||||||||| |||||| | ||||| ||||| || ||||| Sbjct 2365 CGCCTGGCGCACTACAACAAGCGCTCGACGATCACGTCCCGCGAAATCCAAACGGCCGTC 2424 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 |||||| | ||| || || ||||||| |||||||||||| || || || Sbjct 2425 CGCCTGCTGCTGCCTGGTGAGCTGGCCAAGCACGCCGTCTCGGAAGGAAC 2474 >seq1541 Length=81579 Score = 114 bits (126), Expect = 2e-19 Identities = 139/185 (75%), Gaps = 11/185 (6%) Strand=Plus/Plus Query 1456096 GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATC--- 1456152 |||||||| ||| | |||| |||| ||| |||||||||||||| | || |||||| Sbjct 59482 GCCATCGAAACGCTACCGTGCGTGAAGAAGAAGGCCGACTGGGCCCTTAACTGGATCTCG 59541 Query 1456153 AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCA 1456211 | |||| ||| | |||||| ||| || | |||| ||||| | ||||||||| | Sbjct 59542 AGCAAGAAGGCC-----AACTTTGGCGAACGTGTGGTCGCGTTTGCTGCCGTCGAGGGTA 59596 Query 1456212 TCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCC 1456270 |||| ||| ||||| || |||| |||| || ||||| |||||||| ||||| |||||| Sbjct 59597 TCTTCTTCAGCGGCAGCTT-TGCGTCCATTTTCTGGCTGAAGAAGCGTGGCCTGATGCCC 59655 Query 1456271 GGTCT 1456275 || || Sbjct 59656 GGGCT 59660 Score = 109 bits (120), Expect = 8e-18 Identities = 195/279 (70%), Gaps = 7/279 (3%) Strand=Plus/Plus Query 1455796 AGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT--CGGCGCCGACACGGTCCA 1455853 ||||||| || ||||||||||||| || ||||| ||||| || | |||| | | Sbjct 59116 AGGCCGAAGCATCCTTTTGGACCGTGGAAGAGGTGGACCTATCGAAG--GACATGAAGGA 59173 Query 1455854 CTGGGTGTCGCTGAGCGACGA-CGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTC 1455912 ||||| || ||| | ||| ||| || ||||||||| |||||| || ||||| ||| Sbjct 59174 CTGGGACGCGTTGAA-GCCGAGCGAACGTCATTTCATCTCGCACGTGCTGGCCTTCTTT- 59231 Query 1455913 GCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAA 1455972 || || |||||||||||| ||| || |||| | ||||| | | || || || Sbjct 59232 GCTGCGTCTGATGGCATCGTGAACGAAAATCTGGTGGAACGCTTCAGCCAGGAAGTGCAG 59291 Query 1455973 TTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAA 1456032 | | |||||||| | || ||||| || ||||| || || ||||| | || || Sbjct 59292 GTAACGGAGGCACGCTGCTTCTACGGCTTTCAGATTGCGATGGAAAATGTGCATAGCGAG 59351 Query 1456033 ACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 | |||||||| |||||||| || ||| || |||| || Sbjct 59352 ATGTACTCGCTGCTGATCGATACGTACATCCGGGACTCG 59390 >seq569 Length=217393 Score = 104 bits (114), Expect = 3e-16 Identities = 194/279 (70%), Gaps = 7/279 (3%) Strand=Plus/Plus Query 1455796 AGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC--TCGGCGCCGACACGGTCCA 1455853 ||||||| || ||||||||||||| || ||||| |||| ||| | |||| | | Sbjct 205793 AGGCCGAAGCATCCTTTTGGACCGTGGAAGAGGTGGACCTATCGAAG--GACATGAAGGA 205850 Query 1455854 CTGGGTGTCGCTGAGCGACGA-CGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTC 1455912 ||||| || ||| | ||| ||| || ||||||||| |||||| || ||||| ||| Sbjct 205851 CTGGGACGCGTTGA-AGCCGAGCGAACGTCATTTCATCTCGCACGTGCTGGCCTTCTTT- 205908 Query 1455913 GCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAA 1455972 || || |||||||| ||| ||| || |||| | ||||| | | || || || Sbjct 205909 GCTGCGTCTGATGGCATTGTGAACGAAAATCTGGTGGAACGCTTCAGCCAGGAAGTGCAG 205968 Query 1455973 TTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAA 1456032 | | |||||||| | || ||||| || ||||| || || ||||| | || || Sbjct 205969 GTAACGGAGGCACGCTGCTTCTACGGCTTTCAGATTGCGATGGAAAATGTGCATAGCGAG 206028 Query 1456033 ACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 | |||||||| |||||||| || ||| || |||| || Sbjct 206029 ATGTACTCGCTGCTGATCGATACGTACATCCGGGACTCG 206067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7172931701515580