Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq843 116 3e-21 seq701 116 3e-21 seq98 116 3e-21 seq2250 111 1e-19 seq654 84.2 2e-11 >seq843 Length=160513 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || |||| |||||||||||||| || || Sbjct 68872 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTACCGGCGAA 68931 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| || | || | || |||||||||| |||||| ||||| | | Sbjct 68932 GATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 68991 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||| || | ||| ||||| | || || || |||||||| | ||||| || Sbjct 68992 CTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTACCCGTGAGGGTTTTGAC 69051 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 69052 GAAGATCTGCAT 69063 >seq701 Length=187196 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || |||| |||||||||||||| || || Sbjct 176815 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTACCGGCGAA 176756 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| || | || | || |||||||||| |||||| ||||| | | Sbjct 176755 GATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 176696 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||| || | ||| ||||| | || || || |||||||| | ||||| || Sbjct 176695 CTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTACCCGTGAGGGTTTTGAC 176636 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 176635 GAAGATCTGCAT 176624 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || |||| |||||||||||||| || || Sbjct 183584 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTACCGGCGAA 183525 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| || | || | || |||||||||| |||||| ||||| | | Sbjct 183524 GATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 183465 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||| || | ||| ||||| | || || || |||||||| | ||||| || Sbjct 183464 CTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTACCCGTGAGGGTTTTGAC 183405 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 183404 GAAGATCTGCAT 183393 >seq98 Length=483913 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| || || || | || || |||||||| || || || Sbjct 465599 CTCCTTCTGAATGTTGTAGTCGGACAGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAA 465540 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| |||||||| || | ||||| | |||||||||| |||||| ||||| | Sbjct 465539 GATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTT 465480 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| | || ||||||| |||||| || || || |||| || ||||| Sbjct 465479 CTCGATCGTGTCCGAGGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCAC 465420 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 465419 GAAGATCTGCAT 465408 >seq2250 Length=42400 Score = 111 bits (122), Expect = 1e-19 Identities = 169/239 (71%), Gaps = 9/239 (4%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | | || ||||| ||| | || ||||| ||||||||||| |||| | Sbjct 17064 CCACCGCGGAGTCGCAGCACCAGATGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAC 17005 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || ||||||||||| || ||||| || | |||||||| || | |||| Sbjct 17004 AGGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGA 16945 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGAT---TCC 35686 | | ||||| ||| |||||| |||| | | | | |||||| |||| || Sbjct 16944 ATTCCTTCCTTATCCTGGATCTTGGCTTTCACATTCTCGATCGTGTC---CGATGGCTCG 16888 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGC---ATTCTGTG 35742 ||||| | ||||| || || ||||| | |||||||| || |||||| |||||||| Sbjct 16887 ACCTCGAGTGTGATGGTCTTGCCCGTGAGTGTTTTCACGAAAATCTGCATGATTCTGTG 16829 >seq654 Length=198528 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/203 (71%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 44190 ATGTATTGGTGCAAGAAGATATTGGAGTGGTCGGAAGATGCGCAAACCGCGCTCGTTCAT 44249 ||||| ||| ||| |||||| |||||||| | || | || || | || | | || Sbjct 166881 ATGTACTGGGCCAAAAAGATACTGGAGTGGACCAAA-ACGC-CAGAGGAAGCGCTTGCAA 166938 Query 44250 --GCCATCTATCTGAACGACAAGTACAGTTTGGACGGTCGCGACCCCAACGGGTACGTAG 44307 ||||||||||||||||| |||||| |||| || ||||| || ||||||||||| | Sbjct 166939 CGGCCATCTATCTGAACGATCGGTACAGCCTGGATGGACGCGATCCGAACGGGTACGTCG 166998 Query 44308 GATGTATGTGGTCCATTTGCGGTGTCCACGA-CAGGGCGTGGCGAGAGCTACCCATCTAC 44366 | || |||||||| || ||| | ||||| || ||| ||| |||| || | | Sbjct 166999 GTTGCATGTGGTCGATCGCCGGCATTCACGATCAAGGC-TGGAAGGAGCGTGAAATTTTC 167057 Query 44367 GGCAAAGTGCGCTACATGAACTA 44389 || || | || ||||||||||| Sbjct 167058 GGGAAGATTCGGTACATGAACTA 167080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450508529397200