Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq569 107 2e-18 seq1541 96.9 3e-15 seq1116 91.5 1e-13 >seq569 Length=217393 Score = 107 bits (118), Expect = 2e-18 Identities = 299/448 (67%), Gaps = 18/448 (4%) Strand=Plus/Plus Query 44040 TGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAAGCAGACTGGGCCCTTAAA 44098 |||| ||||| || ||||| |||| |||| | || | || || |||||||||||||| Sbjct 206154 TGTTCAATGCCATCGAAACGCTACCGTGCG-TGAAGAAGAAGGCTGACTGGGCCCTTAAC 206212 Query 44099 TGGATAAATTCAAATGATTCT---TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAA 44155 ||||| || | | ||||| ||||| | ||||||||||| | || || Sbjct 206213 TGGATCTCGAGCAAGAAGGCCAACTTTGGCGAACGTGTGGTCGCGTTTGCGGCCGTCGAG 206272 Query 44156 GGCATTTTCTTTTCAG-GATCG-TTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGA 44213 || || ||| ||||| | | | |||||| |||| || ||| | ||||| ||||| ||| Sbjct 206273 GGTATCTTC--TTCAGCGGTAGCTTTGCGTCCATTTTCTGGCTGAAGAAGCGAGGCCTGA 206330 Query 44214 TGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATT 44273 |||| ||| ||||||| || || ||| | || || || || || || |||||||||| Sbjct 206331 TGCCCGGGCTGACGTTCTCGAACGAGCTGATTTCGCGCGACGAGGGATTGCATTGCGATT 206390 Query 44274 TTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAG 44333 | || ||| | | | | ||||| || | | ||||| || || | || | Sbjct 206391 TCGCGTGCCTAATGTTCAGGTATCT-GGTG--CAGAAGCCGTCGAAGGAGCGCGTGACGG 206447 Query 44334 ATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAA 44393 | || | || || ||| ||| || ||||||||| |||| | ||| | || || Sbjct 206448 AGATCATCCGTGATGCGGTAGTGATCGAGCAAGAATTTTTGACGAAAGCCCTGCCGGTGG 206507 Query 44394 ATTTAATAGGAATGAA---TGAACTTTTGATGAACCAATATATTGAATACATTGCAGATC 44450 || | | || ||||| |||| ||||| ||| || ||||| | | || |||| Sbjct 206508 ATATGCTCGGCATGAACTGCGAAC---TGATGTCCCAGTACATTGAGTTTGTGGCCGATC 206564 Query 44451 GTTTACTTTTGGAACTGGGTTGCGATAA 44478 |||| || |||| ||||||| || || Sbjct 206565 GTTTGCTGCTGGAGTTGGGTTGTGACAA 206592 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 43854 TGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGC 43913 |||| || ||||||||| || || || || || |||||| |||| || || | Sbjct 205898 TGGCCTTCTTTGCTGCGTCTGATGGCATTGTGAACGAAAATCTGGTGGAACGCTTCAGCC 205957 Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973 | ||||| || || | || ||||| || || || || ||||| ||||| || |||||| Sbjct 205958 AGGAAGTGCAGGTAACGGAGGCACGCTGCTTCTACGGCTTTCAGATTGCGATGGAAAATG 206017 Query 43974 TTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATC 44014 | ||| || |||||| || ||||| |||||||||||| Sbjct 206018 TGCATAGCGAGATGTACTCGCTGCTGATCGATACGTACATC 206058 >seq1541 Length=81579 Score = 96.9 bits (106), Expect = 3e-15 Identities = 171/246 (70%), Gaps = 5/246 (2%) Strand=Plus/Plus Query 44040 TGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAAGCAGACTGGGCCCTTAAA 44098 |||| ||||| || ||||| |||| |||| | || | || || |||||||||||||| Sbjct 59474 TGTTCAATGCCATCGAAACGCTACCGTGCG-TGAAGAAGAAGGCCGACTGGGCCCTTAAC 59532 Query 44099 TGGATAAATTCAAATGATTCT---TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAA 44155 ||||| || | | ||||| ||||| | ||||||||||| | || || Sbjct 59533 TGGATCTCGAGCAAGAAGGCCAACTTTGGCGAACGTGTGGTCGCGTTTGCTGCCGTCGAG 59592 Query 44156 GGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATG 44215 || || ||||| || |||||| |||| || ||| | ||||| || || ||||| Sbjct 59593 GGTATCTTCTTCAGCGGCAGCTTTGCGTCCATTTTCTGGCTGAAGAAGCGTGGCCTGATG 59652 Query 44216 CCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTT 44275 || ||| ||||||| || || ||| | || || || || || || ||||||||||| Sbjct 59653 CCCGGGCTGACGTTCTCGAACGAGCTGATTTCGCGCGACGAGGGATTGCATTGCGATTTC 59712 Query 44276 GCTTGC 44281 || ||| Sbjct 59713 GCGTGC 59718 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 43854 TGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGC 43913 |||| || ||||||||| || || || || || |||||| |||| || || | Sbjct 59221 TGGCCTTCTTTGCTGCGTCTGATGGCATCGTGAACGAAAATCTGGTGGAACGCTTCAGCC 59280 Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973 | ||||| || || | || ||||| || || || || ||||| ||||| || |||||| Sbjct 59281 AGGAAGTGCAGGTAACGGAGGCACGCTGCTTCTACGGCTTTCAGATTGCGATGGAAAATG 59340 Query 43974 TTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATC 44014 | ||| || |||||| || ||||| |||||||||||| Sbjct 59341 TGCATAGCGAGATGTACTCGCTGCTGATCGATACGTACATC 59381 >seq1116 Length=122745 Score = 91.5 bits (100), Expect = 1e-13 Identities = 221/331 (67%), Gaps = 8/331 (2%) Strand=Plus/Plus Query 19612 GGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTG 19671 || |||||||| || ||||||||||| || || ||||| | || || || | ||| | Sbjct 85877 GGTGTACATGATACCGTTGTCAATCAGCTATTGGCAAAAATCGATGGAGTAGAGCAATTA 85936 Query 19672 AATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATTA 19731 || || ||| |||| || |||||||| ||| | ||| | || ||| || || || Sbjct 85937 AACAACATTCTAGTCATAGGCATGACCAATCGCAGGGACATGATTGACGAAGCTTTGCTA 85996 Query 19732 CGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTGTG 19791 |||||||||||| ||||| | | || ||||| | | || ||||| || || || Sbjct 85997 CGACCCGGTCGGCTGGAAGTGCAAATGGAAATCAGTCTTCCTAATGAAGAAGGCCGGGTT 86056 Query 19792 GAAATTTTAAACATACATACATCAAC-CATGCGACAA---AATAACCTTTTAAATGACGA 19847 | ||||| ||| ||||| || | |||| | || || || || | ||| Sbjct 86057 CAGATTTTGTCCATCCATAC-TCGTCGCATGAAAGAATTCAAGAAACTGGCACCAGAC-- 86113 Query 19848 TGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACTATAGCGGCGCAGAACTTGAGGG 19907 ||||| ||| |||| | | || || ||||| | |||||| || ||||| || || Sbjct 86114 -GTAGACCTACGAGAACTCGGAGTAAAGACTAAAAATTTTAGCGGTGCCGAACTGGAAGG 86172 Query 19908 ATTAGTGAGGGCCGCCCAATCAATTGCAATG 19938 || || | || || ||||| | |||||| Sbjct 86173 TTTGGTTCGTGCTGCACAATCCACCGCAATG 86203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397210942292950