Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq1541 122 3e-22 seq569 107 6e-18 >seq1541 Length=81579 Score = 122 bits (134), Expect = 3e-22 Identities = 129/169 (76%), Gaps = 1/169 (1%) Strand=Plus/Plus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||| | ||| || | ||||| ||||||| ||||| || | || || |||||||| Sbjct 59553 CAACTTTGGCGAACGTGTGGTCGCGTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGCAG 59612 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 |||| || ||||| |||||| |||| |||||||| || |||| ||| ||||| || | Sbjct 59613 CTTT-GCGTCCATTTTCTGGCTGAAGAAGCGTGGCCTGATGCCCGGGCTGACGTTCTCGA 59671 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCT 443864 |||| ||||| || |||||||| ||||||||||| ||||| || || Sbjct 59672 ACGAGCTGATTTCGCGCGACGAGGGATTGCATTGCGATTTCGCGTGCCT 59720 >seq569 Length=217393 Score = 107 bits (118), Expect = 6e-18 Identities = 126/169 (75%), Gaps = 1/169 (1%) Strand=Plus/Plus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||| | ||| || | ||||| ||||| | ||||| || | || || ||||| || Sbjct 206233 CAACTTTGGCGAACGTGTGGTCGCGTTTGCGGCCGTCGAGGGTATCTTCTTCAGCGGTAG 206292 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 |||| || ||||| |||||| |||| ||||| || || |||| ||| ||||| || | Sbjct 206293 CTTT-GCGTCCATTTTCTGGCTGAAGAAGCGAGGCCTGATGCCCGGGCTGACGTTCTCGA 206351 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCT 443864 |||| ||||| || |||||||| ||||||||||| ||||| || || Sbjct 206352 ACGAGCTGATTTCGCGCGACGAGGGATTGCATTGCGATTTCGCGTGCCT 206400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1587306465422550