Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq591 131 2e-25 seq1066 93.3 5e-14 >seq591 Length=212830 Score = 131 bits (144), Expect = 2e-25 Identities = 443/683 (65%), Gaps = 23/683 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| | ||| | ||||| || |||||| | || || |||||||| || || || || || Sbjct 137141 GTAAACGTTGGACGTGTACGGCTCAAAGGACTCGTTGTTACCCAATATCTGCGCCGTCGA 137082 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTG--ATGCGT 110824 ||| || ||||| ||||||| || || || || | ||| | || ||| || Sbjct 137081 GGCGGTCGGCATCGGTGCCAGCAGTAGCGAATTGCGGATACCGTGCT--TTGCAATTTTC 137024 Query 110825 TCCTTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACT 110882 || || || | |||||| | || | | | | ||| | ||||||||| ||| Sbjct 137023 TCTTTCAGTTCGGCCCAGTTCCAAAGATCCG--TCGGTTCTTTGTTCCACATGTCGTACT 136966 Query 110883 GAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTT---GGGCTT 110939 | | | |||| | | | ||| ||| || | ||||| || | || | |||| Sbjct 136965 GTAAGATGCCTTTGCTCACCGGACTACCTTCGTATGTTTCGTACGGCCCGTCACGGGCG- 136907 Query 110940 CAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCAT 110999 ||||| ||||||||||| ||||| | | | || ||||||||||| || | || Sbjct 136906 --GCCAACTCACAGCTCGCTTCCAGTGCGCCATAGTAGATGGTTTCAAATATTTGCTGAT 136849 Query 111000 TCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGA 111059 ||| || | |||||| || || ||| ||||| ||||| ||| |||| || | Sbjct 136848 TCAGCTTTTGGGCTTCTTCACTTTCGTATGGATAGCGCATTAAAATGAATGCATCTGCCA 136789 Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA---CTTTCGCGCAGTCT 111116 || |||||||| | ||| || || || || ||||| ||||| |||| || | Sbjct 136788 TGCCCTGAACACCAATACCGATCGGCCTATGGCGCATGTTAGAGCGCTTT---GCCTCCG 136732 Query 111117 CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176 |||||||| ||||| |||| |||| | ||| ||||| || |||||| | | || Sbjct 136731 GTACGGGATAGTAATTTATGTCGATGATTTTGTTCAGATTGCGCGTCACAATCCTGGCGA 136672 Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 111236 || | || ||| || | || | || | ||| || ||| || | | | Sbjct 136671 CGTCCTTCAGCTTTGCAAAGTCGTACGT---TTTGTCTGGCTTCACAAACATGTTCAACG 136615 Query 111237 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 111296 |||| || |||| ||| || || || ||||| || | |||||| | |||||| | Sbjct 136614 CGATCGAGGCCAGATTACACACCGCTACTTCATCTTTCGACGAGTACTCCACAATTTCGG 136555 Query 111297 TACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACG 111356 |||| | || |||| ||| || || || | |||| || || ||||| ||| || | Sbjct 136554 TACAAAGATTAGAACACTTGATGGTGCCAATGTTCTGCTGATTGCTCTTACGGTTACATG 136495 Query 111357 CATCCTTGTAGAGCATGTAGGGC 111379 | |||||||| || ||||| ||| Sbjct 136494 CGTCCTTGTACAGTATGTACGGC 136472 >seq1066 Length=128711 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 181779 GTGAAGATATACCTCGTTTGAGAAGCGTCTTTACCACCCATGAGACGCGTACCAAATTGA 181838 || ||||| ||||||| | | ||| || |||||| | | |||||||||||| ||| Sbjct 6128 GTAAAGATGTACCTCGGGCTGGCACTGTCCTTTCCACCCGTCAAACGCGTACCAAACTGA 6069 Query 181839 CCACATGGCTCAAGAAGGTTAATGTTGTTTGAACCTGTATAGTCGTTGGCCAACTTAACG 181898 || | || | || || || |||||||| || ||||| | |||| || ||| Sbjct 6068 CCGCCCGGATACAGCAGATTGATGTTGTTGCTGCCGACATAGTTCTGCGCCAGATTGACG 6009 Query 181899 ATGGTATCCGCAAGGGACACTTCACCGTGGTGGTAAGCTGACTTGTCCGCAACATATGCC 181958 || || ||| ||| |||||||||||||| || ||||| |||||||| || | Sbjct 6008 ATCGTGGAGCAAAGCGACTGCTCACCGTGGTGGTACGCGGACTTCTCCGCAACCGATCCA 5949 Query 181959 GCCAACTGTGCCACCTTCA 181977 |||| ||| |||||||||| Sbjct 5948 GCCAGCTGGGCCACCTTCA 5930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627634848264000