Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq591 131 2e-25
seq1066 93.3 5e-14
>seq591
Length=212830
Score = 131 bits (144), Expect = 2e-25
Identities = 443/683 (65%), Gaps = 23/683 (3%)
Strand=Plus/Minus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||| | ||| | ||||| || |||||| | || || |||||||| || || || || ||
Sbjct 137141 GTAAACGTTGGACGTGTACGGCTCAAAGGACTCGTTGTTACCCAATATCTGCGCCGTCGA 137082
Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTG--ATGCGT 110824
||| || ||||| ||||||| || || || || | ||| | || ||| ||
Sbjct 137081 GGCGGTCGGCATCGGTGCCAGCAGTAGCGAATTGCGGATACCGTGCT--TTGCAATTTTC 137024
Query 110825 TCCTTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACT 110882
|| || || | |||||| | || | | | | ||| | ||||||||| |||
Sbjct 137023 TCTTTCAGTTCGGCCCAGTTCCAAAGATCCG--TCGGTTCTTTGTTCCACATGTCGTACT 136966
Query 110883 GAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTT---GGGCTT 110939
| | | |||| | | | ||| ||| || | ||||| || | || | ||||
Sbjct 136965 GTAAGATGCCTTTGCTCACCGGACTACCTTCGTATGTTTCGTACGGCCCGTCACGGGCG- 136907
Query 110940 CAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCAT 110999
||||| ||||||||||| ||||| | | | || ||||||||||| || | ||
Sbjct 136906 --GCCAACTCACAGCTCGCTTCCAGTGCGCCATAGTAGATGGTTTCAAATATTTGCTGAT 136849
Query 111000 TCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGA 111059
||| || | |||||| || || ||| ||||| ||||| ||| |||| || |
Sbjct 136848 TCAGCTTTTGGGCTTCTTCACTTTCGTATGGATAGCGCATTAAAATGAATGCATCTGCCA 136789
Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA---CTTTCGCGCAGTCT 111116
|| |||||||| | ||| || || || || ||||| ||||| |||| || |
Sbjct 136788 TGCCCTGAACACCAATACCGATCGGCCTATGGCGCATGTTAGAGCGCTTT---GCCTCCG 136732
Query 111117 CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176
|||||||| ||||| |||| |||| | ||| ||||| || |||||| | | ||
Sbjct 136731 GTACGGGATAGTAATTTATGTCGATGATTTTGTTCAGATTGCGCGTCACAATCCTGGCGA 136672
Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 111236
|| | || ||| || | || | || | ||| || ||| || | | |
Sbjct 136671 CGTCCTTCAGCTTTGCAAAGTCGTACGT---TTTGTCTGGCTTCACAAACATGTTCAACG 136615
Query 111237 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 111296
|||| || |||| ||| || || || ||||| || | |||||| | |||||| |
Sbjct 136614 CGATCGAGGCCAGATTACACACCGCTACTTCATCTTTCGACGAGTACTCCACAATTTCGG 136555
Query 111297 TACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACG 111356
|||| | || |||| ||| || || || | |||| || || ||||| ||| || |
Sbjct 136554 TACAAAGATTAGAACACTTGATGGTGCCAATGTTCTGCTGATTGCTCTTACGGTTACATG 136495
Query 111357 CATCCTTGTAGAGCATGTAGGGC 111379
| |||||||| || ||||| |||
Sbjct 136494 CGTCCTTGTACAGTATGTACGGC 136472
>seq1066
Length=128711
Score = 93.3 bits (102), Expect = 5e-14
Identities = 140/199 (70%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 181779 GTGAAGATATACCTCGTTTGAGAAGCGTCTTTACCACCCATGAGACGCGTACCAAATTGA 181838
|| ||||| ||||||| | | ||| || |||||| | | |||||||||||| |||
Sbjct 6128 GTAAAGATGTACCTCGGGCTGGCACTGTCCTTTCCACCCGTCAAACGCGTACCAAACTGA 6069
Query 181839 CCACATGGCTCAAGAAGGTTAATGTTGTTTGAACCTGTATAGTCGTTGGCCAACTTAACG 181898
|| | || | || || || |||||||| || ||||| | |||| || |||
Sbjct 6068 CCGCCCGGATACAGCAGATTGATGTTGTTGCTGCCGACATAGTTCTGCGCCAGATTGACG 6009
Query 181899 ATGGTATCCGCAAGGGACACTTCACCGTGGTGGTAAGCTGACTTGTCCGCAACATATGCC 181958
|| || ||| ||| |||||||||||||| || ||||| |||||||| || |
Sbjct 6008 ATCGTGGAGCAAAGCGACTGCTCACCGTGGTGGTACGCGGACTTCTCCGCAACCGATCCA 5949
Query 181959 GCCAACTGTGCCACCTTCA 181977
|||| ||| ||||||||||
Sbjct 5948 GCCAGCTGGGCCACCTTCA 5930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627634848264000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |