Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq591 109 7e-19 seq368 104 3e-17 >seq591 Length=212830 Score = 109 bits (120), Expect = 7e-19 Identities = 623/985 (63%), Gaps = 25/985 (3%) Strand=Plus/Minus Query 118188 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTG 118247 |||| |||||| ||||||||| |||| ||||||||||| || || || || ||||| || Sbjct 137134 TTGGACGTGTACGGCTCAAAGGACTCGTTGTTACCCAATATCTGCGCCGTCGAGGCGGTC 137075 Query 118248 GGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT--TTTCCCTAATGCGTTCCTTGA 118305 ||||| ||||||| || || || |||| ||| | ||| | ||| || || | Sbjct 137074 GGCATCGGTGCCAGCAGTAGCGAATTGCGGATACCGTGCTTTGC--AATTTTCTCTTTCA 137017 Query 118306 GAGCGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGAT 118363 | || |||||| | || | | | | || | |||||| || |||| | ||| Sbjct 137016 GTTCGGCCCAGTTCCAAAGATCCG--TCGGTTCTTTGTTCCACATGTCGTACTGTAAGAT 136959 Query 118364 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 118423 |||| | | | || || || |||| || || || || ||| | ||||| || Sbjct 136958 GCCTTTGCTCACCGGACTACCTTCGTATGTTTCGTACGGCCCGTCACGGGCGGCCAACTC 136899 Query 118424 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTT 118483 ||||||| || || || | | || || |||||||| || | ||||| || || Sbjct 136898 ACAGCTCGCTTCCAGTGCGCCATAGTAGATGGTTTCAAATATTTGCTGATTCA--GCTTT 136841 Query 118484 --GGCCTCGTCGGAATCAAACGCGAGTCGGCAC-AAAATAAATACATCCGCGAGACCTTG 118540 ||| || || || | | || ||| ||||| ||| |||| || | || || Sbjct 136840 TGGGCTTCTTCACTTTCGTATG-GATAGCGCATTAAAATGAATGCATCTGCCATGCCCTG 136782 Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGG 118597 ||||| | || || || | ||| | ||| ||||| | || |||| ||||| Sbjct 136781 AACACCAATACCGATCGGCCTATGGCGCATGTTAGAGCGCTTTGC---CTCCGGTACGGG 136725 Query 118598 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 118657 ||| |||| | ||||| | | || ||||| || |||| | | | || || | Sbjct 136724 ATAGTAATTTATGTCGATGATTTTGTTCAGATTGCGCGTCACAATCCTGGCGACGTCCTT 136665 Query 118658 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGA 118717 |||||| | | || | | | ||| || ||| || | | ||||| || Sbjct 136664 CAGCTTTGCAAAGTCGTACGTTT---TGTCTGGCTTCACAAACATGTTCAACGCGATCGA 136608 Query 118718 CGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAA 118777 |||||||||||||| | ||||| || | |||||| | |||||| || || | Sbjct 136607 GGCCAGATTACACACCGCTACTTCATCTTTCGACGAGTACTCCACAATTTCGGTACAAAG 136548 Query 118778 GTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTT 118837 || |||| ||| |||||||| | ||||| ||||| ||| |||||| || ||||| Sbjct 136547 ATTAGAACACTTGATGGTGCCAATGTTCTGCTGATTGCTCTTACGGTTACATGCGTCCTT 136488 Query 118838 GTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATC 118897 ||| || ||||| ||| || || ||| || |||| | || | ||| | ||| Sbjct 136487 GTACAGTATGTACGGCACACCTGTTTCCACCTGCGACTCAATGATTGAAAACCACAGATC 136428 Query 118898 GGCAGCTGGCACAGTGGCGT-TGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTT 118956 || ||| || ||| | ||| ||||| | |||||| | ||||| || | Sbjct 136427 CCGTGCCTTCAC-CTGTCGTATAAATCGGCCCTCCTTCTCGTAGCTAGTGTACAGCTTCT 136369 Query 118957 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACC 119016 | ||||| |||||| || || | || || || | | || || | || || Sbjct 136368 CGAACTCCTCACCCCAGGTATCAGCCAGTCCGGGACAGTCGTGCGGACACATTAGGCTCC 136309 Query 119017 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGA 119076 | || | |||| ||||| ||||||| ||||| |||||||| || || |||| | Sbjct 136308 ACATTTCATTCGCCTCCACCCGAGTCATGAACAGGTCCGGGATCCACAGGGCGTAGAACA 136249 Query 119077 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 119136 ||| ||| || | || || | || ||| || |||| ||| || | | Sbjct 136248 TATCTCGAGCTCGCACCTCCTCCTTGCCGGTATTTTTCTTCAGATCCAGAAACTCGAATA 136189 Query 119137 TATCCGCGTGCCACGGTTCCAGGTA 119161 ||||| | ||||| ||||| ||||| Sbjct 136188 TATCCCCATGCCATGGTTCGAGGTA 136164 >seq368 Length=285863 Score = 104 bits (114), Expect = 3e-17 Identities = 568/896 (63%), Gaps = 27/896 (3%) Strand=Plus/Minus Query 118188 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTG 118247 |||| |||||| ||||||||| |||| ||||||||||| || || || || ||||| || Sbjct 114996 TTGGACGTGTACGGCTCAAAGGACTCGTTGTTACCCAATATCTGCGCCGTCGAGGCGGTC 114937 Query 118248 GGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT--TTTCCCTAATGCGTTCCTTGA 118305 ||||| ||||||| || || || |||| ||| | ||| | ||| || || | Sbjct 114936 GGCATCGGTGCCAGCAGTAGCGAATTGCGGATACCGTGCTTTGC--AATTTTCTCTTTCA 114879 Query 118306 GAGCGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGAT 118363 | || |||||| | || | | | | || | |||||| || |||| | ||| Sbjct 114878 GTTCGGCCCAGTTCCAAAGATCCG--TCGGTTCTTTGTTCCACATGTCGTACTGTAAGAT 114821 Query 118364 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 118423 |||| | | | || || || |||| || || || || ||| | ||||| || Sbjct 114820 GCCTTTGCTCACCGGACTACCTTCGTATGTTTCGTACGGCCCGTCACGGGCGGCCAACTC 114761 Query 118424 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTT 118483 ||||||| || || || | | || || |||||||| || | ||||| || || Sbjct 114760 ACAGCTCGCTTCCAGTGCGCCATAGTAGATGGTTTCAAATATTTGCTGATTCA--GCTTT 114703 Query 118484 --GGCCTCGTCGGAATCAAACGCGAGTCGGCAC-AAAATAAATACATCCGCGAGACCTTG 118540 ||| || || || | | || ||| ||||| ||| |||| || | || || Sbjct 114702 TGGGCTTCTTCACTTTCGTATG-GATAACGCATTAAAATGAATGCATCTGCCATGCCCTG 114644 Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT-CCACGGGAT 118599 ||||||| || || || | ||| | ||| ||| | ||| | | || | |||| Sbjct 114643 AACACCGATACCGATCGGCCTATGGCGCATGTTAAA-------GCGCTTTGCCGCCGGAT 114591 Query 118600 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAA 118659 | |||| | ||||| | | || ||||| || |||| | | | || || | | Sbjct 114590 AGTAATTTATGTCGATGATTTTGTTCAGATTGCGCGTCACAATCCTGGCGACGTCCTTCA 114531 Query 118660 GCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACG 118719 ||||| | | || | | | ||| || ||| || | | ||||| || | Sbjct 114530 GCTTTGCAAAGTCGTACGTTT---TGTCTGGCTTCACAAACATGTTCAACGCGATCGAGG 114474 Query 118720 CCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGT 118779 ||||||||||||| | ||||| || | |||||| | |||||| || || | | Sbjct 114473 CCAGATTACACACCGCTACTTCATCTTTCGACGAGTACTCCACAATTTCGGTACAAAGAT 114414 Query 118780 TTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGT 118839 | |||| ||| |||||||| | ||||| ||||| ||| |||||| || ||||||| Sbjct 114413 TAGAACACTTGATGGTGCCAATGTTCTGCTGATTGCTCTTACGGTTACATGCGTCCTTGT 114354 Query 118840 AAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGG 118899 | || ||||| ||| || || ||| || |||| | || | ||| | ||| Sbjct 114353 ACAGTATGTACGGCACACCTGTTTCCACCTGCGACTCAATGATTGAAAACCACAGATCCC 114294 Query 118900 CAGCTGGCACAGTGGCGT-TGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCA 118958 || ||| || ||| | ||| ||||| | |||||| | ||||| || || Sbjct 114293 GTGCCTTCAC-CTGTCGTATAAATCGGCCCTCCTTCTCGTAGCTAGTGTACAGCTTCTCG 114235 Query 118959 AACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCAT 119018 ||||| |||||| || || | || || || | | ||||| | || ||| Sbjct 114234 AACTCCTCACCCCAGGTATCAGCCAGTCCAGGACAGTCGTGCGGGCACATTAGGCTCCAC 114175 Query 119019 TGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAA 119074 || | |||| ||||| ||||||| ||||| |||||||| || || |||| Sbjct 114174 ATTTCATTCGCCTCCACCCGAGTCATGAACAGGTCCGGGATCCACAGGGCGTAGAA 114119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618044117040400