Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq591 134 2e-26 seq1066 125 8e-24 seq569 89.7 6e-13 >seq591 Length=212830 Score = 134 bits (148), Expect = 2e-26 Identities = 627/985 (64%), Gaps = 19/985 (2%) Strand=Plus/Plus Query 104616 TCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAG 104675 |||| || || |||||||| | |||||| | ||||| || || || || | Sbjct 136162 TCTACCTCGAACCATGGCATGGGGATATATTCGAGTTTCTGGATCTGAAGAAAAATACCG 136221 Query 104676 GTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCA 104735 | | ||||||| ||| || ||| | |||| ||| || ||||| || || || |||| Sbjct 136222 GCAAGGAGGAGGTGCGAGCTCGAGATATGTTCTACGCCCTGTGGATCCCGGACCTGTTCA 136281 Query 104736 TGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTC 104795 ||| | || |||| || || | ||| || | ||||| || | || || | Sbjct 136282 TGACTCGGGTGGAGGCGAATGAAATGTGGAGCCTAATGTGTCCGCACGACTGTCCCGGAC 136341 Query 104796 TCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTC 104855 | | ||| || |||||||||||| || || ||||| | |||||| | || || | Sbjct 136342 TGGCTGATACCTGGGGTGAGGAGTTCGAGAAGCTGTACACTAGCTACGAGAAGGAGGGCC 136401 Query 104856 GGGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACC 104914 | | | |||| |||| || ||| ||||| | || | |||| || Sbjct 136402 GATTTA-TACGACAGGTGAAGGCACGGGATCTGTGGTTTTCAATCATTGAGTCGCAGGTG 136460 Query 104915 GAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 104974 || || ||| || ||||| || ||||| ||||| ||||||| ||||| ||||| || Sbjct 136461 GAAACAGGTGTGCCGTACATACTGTACAAGGACGCATGTAACCGTAAGAGCAATCAGCAG 136520 Query 104975 AATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAA 105034 || | || |||||| |||| ||||| ||||| ||||| |||| | | ||| Sbjct 136521 AACATTGGCACCATCAAGTGTTCTAATCTTTGTACCGAAATTGTGGAGTACTCGTCGAAA 136580 Query 105035 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 105094 ||||| || |||||||| || || || ||||| | || || |||| | ||||| Sbjct 136581 GATGAAGTAGCGGTGTGTAATCTGGCCTCGATCGCGTTGAACATGTTTGTGAAGCCAGA- 136639 Query 105095 ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTA 105154 |||| || | || | || ||| || | || || | | | ||| || || || Sbjct 136640 -CAAA-ACGTACGACTTTGCAAAGCTGAAGGACGTCGCCAGGATTGTGACGCGCAATCTG 136697 Query 105155 AACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAA----TCTAATAT 105210 |||| | | || || | ||||| || ||||| || | | ||| ||||| || Sbjct 136698 AACAAAATCATCGACATAAATTACTATCCCGT----ACCGGAGGCAAAGCGCTCTAACAT 136753 Query 105211 GAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCG 105270 | | || | || || ||| | ||||||||||| | || |||| ||||||| | || Sbjct 136754 GCGCCATAGGCCGATCGGTATTGGTGTTCAGGGCATGGCAGATGCATTCATTTTAATGCG 136813 Query 105271 CCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTA 105330 | | ||| || || ||||| | | | ||| || |||||||| ||||| || Sbjct 136814 CTATCCATACGAAAGTGAAGAAGCCCAAAAGCTGAATCAGCAAATATTTGAAACCATCTA 136873 Query 105331 TCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTT 105390 | | ||| || || ||||| | |||||||| | ||| || || || ||||| | Sbjct 136874 CTATGGCGCACTGGAAGCGAGCTGTGAGTTGGCCGCCCGTGACGGGCCGTACGAAACATA 136933 Query 105391 TGAGGGTTCTCCAGCTTCACAAGGGGTGCTT-CAATTTGATATGTGGGAAGGTGAGACCA 105449 || ||| ||| | | ||| || ||| || | || |||||| | || | | Sbjct 136934 CGAAGGTAGTCC-GGTGAGCAAAGGCATCTTACAGTACGACATGTGGAACAAAGAACCGA 136992 Query 105450 AGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAA 105507 | || | |||||| | || || || || ||| || | ||| | || || Sbjct 136993 CGGATCTTTGGAACTGGGCCGAACTGAAAGAGAAAATTGCAA--AGCACGGTATCCGCAA 137050 Query 105508 CAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGA 105567 || || |||| || ||||| || ||||| || || || || |||||||| || || Sbjct 137051 TTCGCTACTGCTGGCACCGATGCCGACCGCCTCGACGGCGCAGATATTGGGTAACAACGA 137110 Query 105568 ATGCTTTGAACCCTACACGACGAAC 105592 | |||||| || |||||| | ||| Sbjct 137111 GTCCTTTGAGCCGTACACGTCCAAC 137135 >seq1066 Length=128711 Score = 125 bits (138), Expect = 8e-24 Identities = 247/359 (69%), Gaps = 6/359 (2%) Strand=Plus/Minus Query 168278 CCCGTACCGATACCCTCTGTACCGTTCACGAGAACCATGGGGAGTGTTGGCATGTAGAAG 168337 || ||||||||||| || | |||||| | || | ||| || | | |||| || || Sbjct 6281 CCGGTACCGATACCTTCCGAACCGTTGATCAGCAGCATCGGAATGATCGGCAGATACCAG 6222 Query 168338 TCTGGCTCAATGGGGCGACCATCGTCATCCAAATAGTTGAGAATTGGATCATCTCTCGGA 168397 | || || ||| | || ||||| | | || | || | ||||||||| |||| Sbjct 6221 ACCGGTTCGATGCGCTGATTGTCGTCGTACTGGTACTCCAGCAGTGGATCATCGAGCGGA 6162 Query 168398 TCAAAGATCTTTCGGGCATCTTTTGTGAGCTTTGTAAAGATATACCTCGTT-TGAGACGC 168456 | |||||| | || | | | | | | | |||||||| ||||||| || || Sbjct 6161 TGAAAGATGTGGCGCGTCAGTGTCGACATCATGGTAAAGATGTACCTCGGGCTGGCACTG 6102 Query 168457 ATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATT 168516 ||||| |||||| | | |||||||||||||||||| | ||| | || |||||||| || Sbjct 6101 -TCCTTTCCACCCGTCAAACGCGTACCAAACTGACCGCCCGGATACAGCAGATTGATGTT 6043 Query 168517 GTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACT--TCA 168574 ||| || | |||| | ||||| ||||| |||||| || | || |||| ||| Sbjct 6042 GTTGCTGCCGACATAGTTCTGCGCCAGATTGACGATCGTG-GAGC-AAAGCGACTGCTCA 5985 Query 168575 CCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTC 168633 |||||||||||||| |||||| || || || | |||| ||| ||||| |||| ||| Sbjct 5984 CCGTGGTGGTACGCGGACTTCTCCGCAACCGATCCAGCCAGCTGGGCCACCTTCACCTC 5926 >seq569 Length=217393 Score = 89.7 bits (98), Expect = 6e-13 Identities = 97/126 (77%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 94814 TCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGG 94872 |||| |||||| || ||||||||||||||| ||| ||| |||| | |||| ||| Sbjct 206253 TCGCGTTTGCGGCCGTCGAGGGTATCTTCTTCAGCGGTAGCTT-TGCGTCCATTTTCTGG 206311 Query 94873 CTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGAC 94932 || ||||||||||| || ||||| || || ||||| |||||||| || || || ||| Sbjct 206312 CTGAAGAAGCGAGGCCTGATGCCCGGGCTGACGTTCTCGAACGAGCTGATTTCGCGCGAC 206371 Query 94933 GAGGGA 94938 |||||| Sbjct 206372 GAGGGA 206377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582891960451600