Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq1559 114 1e-20
seq109 114 1e-20
>seq1559
Length=79761
Score = 114 bits (126), Expect = 1e-20
Identities = 235/346 (68%), Gaps = 4/346 (1%)
Strand=Plus/Plus
Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001
|| || ||||| || || ||||||| || || || ||||||||||| ||||| || |||
Sbjct 22968 AGTCCAGTGACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAACGGT 23027
Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061
|| || | || | || |||| | ||| || | || || || |||||||| ||
Sbjct 23028 ACGCCCAAGCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATCAGCA 23087
Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30121
||| ||||||| || ||||||||| || || |||||| | | ||| ||
Sbjct 23088 ACGAAAAACTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGAAGGA 23147
Query 30122 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 30181
||||| |||| || ||||| || | || | || ||||| | | ||| | |
Sbjct 23148 TTCCAAGCGCTCATAATGATCCGACGATCGTAAGGATTGTTTTTCAATGTGTCGATCACC 23207
Query 30182 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCT--CATGTCCGTGTACTCTG 30239
||| || |||||| | || |||||| ||| || | | | ||||| ||||| ||
Sbjct 23208 TTTGCCAACTGATCGATTCCTTTCCCCGTGTAATC-GTCGTGACATGT-TTTGTACGTTG 23265
Query 30240 CTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCC 30285
| || || || | |||||| || |||||||||||||| ||||| ||
Sbjct 23266 CACCAAAGTGACGCCACTGAAAACCGTACACCGGTCCTAGGTCACC 23311
>seq109
Length=460762
Score = 114 bits (126), Expect = 1e-20
Identities = 235/346 (68%), Gaps = 4/346 (1%)
Strand=Plus/Minus
Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001
|| || ||||| || || ||||||| || || || ||||||||||| ||||| || |||
Sbjct 284474 AGTCCAGTGACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAACGGT 284415
Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061
|| || | || | || |||| | ||| || | || || || |||||||| ||
Sbjct 284414 ACGCCCAAGCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATCAGCA 284355
Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30121
||| ||||||| || ||||||||| || || |||||| | | ||| ||
Sbjct 284354 ACGAAAAACTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGAAGGA 284295
Query 30122 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 30181
||||| |||| || ||||| || | || | || ||||| | | ||| | |
Sbjct 284294 TTCCAAGCGCTCATAATGATCCGACGATCGTAAGGATTGTTTTTCAATGTGTCGATCACC 284235
Query 30182 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCT--CATGTCCGTGTACTCTG 30239
||| || |||||| | || |||||| ||| || | | | ||||| ||||| ||
Sbjct 284234 TTTGCCAACTGATCGATTCCTTTCCCCGTGTAATC-GTCGTGACATGT-TTTGTACGTTG 284177
Query 30240 CTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCC 30285
| || || || | |||||| || |||||||||||||| ||||| ||
Sbjct 284176 CACCAAAGTGACGCCACTGAAAACCGTACACCGGTCCTAGGTCACC 284131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406059882974280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |