Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1559 114 1e-20 seq109 114 1e-20 >seq1559 Length=79761 Score = 114 bits (126), Expect = 1e-20 Identities = 235/346 (68%), Gaps = 4/346 (1%) Strand=Plus/Plus Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001 || || ||||| || || ||||||| || || || ||||||||||| ||||| || ||| Sbjct 22968 AGTCCAGTGACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAACGGT 23027 Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061 || || | || | || |||| | ||| || | || || || |||||||| || Sbjct 23028 ACGCCCAAGCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATCAGCA 23087 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30121 ||| ||||||| || ||||||||| || || |||||| | | ||| || Sbjct 23088 ACGAAAAACTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGAAGGA 23147 Query 30122 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 30181 ||||| |||| || ||||| || | || | || ||||| | | ||| | | Sbjct 23148 TTCCAAGCGCTCATAATGATCCGACGATCGTAAGGATTGTTTTTCAATGTGTCGATCACC 23207 Query 30182 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCT--CATGTCCGTGTACTCTG 30239 ||| || |||||| | || |||||| ||| || | | | ||||| ||||| || Sbjct 23208 TTTGCCAACTGATCGATTCCTTTCCCCGTGTAATC-GTCGTGACATGT-TTTGTACGTTG 23265 Query 30240 CTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCC 30285 | || || || | |||||| || |||||||||||||| ||||| || Sbjct 23266 CACCAAAGTGACGCCACTGAAAACCGTACACCGGTCCTAGGTCACC 23311 >seq109 Length=460762 Score = 114 bits (126), Expect = 1e-20 Identities = 235/346 (68%), Gaps = 4/346 (1%) Strand=Plus/Minus Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001 || || ||||| || || ||||||| || || || ||||||||||| ||||| || ||| Sbjct 284474 AGTCCAGTGACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAACGGT 284415 Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061 || || | || | || |||| | ||| || | || || || |||||||| || Sbjct 284414 ACGCCCAAGCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATCAGCA 284355 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30121 ||| ||||||| || ||||||||| || || |||||| | | ||| || Sbjct 284354 ACGAAAAACTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGAAGGA 284295 Query 30122 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 30181 ||||| |||| || ||||| || | || | || ||||| | | ||| | | Sbjct 284294 TTCCAAGCGCTCATAATGATCCGACGATCGTAAGGATTGTTTTTCAATGTGTCGATCACC 284235 Query 30182 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCT--CATGTCCGTGTACTCTG 30239 ||| || |||||| | || |||||| ||| || | | | ||||| ||||| || Sbjct 284234 TTTGCCAACTGATCGATTCCTTTCCCCGTGTAATC-GTCGTGACATGT-TTTGTACGTTG 284177 Query 30240 CTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCC 30285 | || || || | |||||| || |||||||||||||| ||||| || Sbjct 284176 CACCAAAGTGACGCCACTGAAAACCGTACACCGGTCCTAGGTCACC 284131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406059882974280