Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1559 114 1e-20 seq109 114 1e-20 >seq1559 Length=79761 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 |||||| |||||||||| || ||||| | ||| || |||||||||||||| || || || Sbjct 22976 GACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAACGGTACGCCCAA 23035 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 || | || ||||||| ||||| | |||||||||||||| |||| || ||| | || Sbjct 23036 GCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATCAGCAACGAAAAA 23095 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGC 6795 || | ||||||||| || || ||||| || | || || ||||| || Sbjct 23096 CTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGAAGGATTCCAAGC 23155 Query 6796 GCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846 || ||| | ||||| | || | ||| || ||||| ||||||||||| Sbjct 23156 GCTCATAATGATCCGACGATCGTAAGGATTGTTTTTCAATGTGTCGATCAC 23206 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 34499 GTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAAC 34558 ||||||||||| ||||| || ||| | || | ||||| | ||| |||| ||||| Sbjct 23206 GTGATCGACACATTGAAAAACAATCCTTACGATCGTCGGATCATTATGAGCGCTTGGAAT 23147 Query 34559 CCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC 34618 || || | || ||||| || || ||||||||| | || || | ||| Sbjct 23146 CCTTCCGACATTCCCAACATGGCCCTGCCGCCGTGCCACTGTTTGGCACAGTTTTTCGTT 23087 Query 34619 GCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTG 34678 || |||| |||||||||||||| | ||||| ||||||| || | || || || || Sbjct 23086 GCTGATGGAGAGCTGTCCTGCCAAATGTATCAGCGATCGGCCGATGTTGGCTTGGGCGTA 23027 Query 34679 CCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729 |||||||||||||| || ||| | ||||| || |||||||||| |||||| Sbjct 23026 CCGTTCAACATTGCCAGCTACTCACTGCTGACCCACATGATCGCGCATGTC 22976 >seq109 Length=460762 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 34499 GTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAAC 34558 ||||||||||| ||||| || ||| | || | ||||| | ||| |||| ||||| Sbjct 284236 GTGATCGACACATTGAAAAACAATCCTTACGATCGTCGGATCATTATGAGCGCTTGGAAT 284295 Query 34559 CCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC 34618 || || | || ||||| || || ||||||||| | || || | ||| Sbjct 284296 CCTTCCGACATTCCCAACATGGCCCTGCCGCCGTGCCACTGTTTGGCACAGTTTTTCGTT 284355 Query 34619 GCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTG 34678 || |||| |||||||||||||| | ||||| ||||||| || | || || || || Sbjct 284356 GCTGATGGAGAGCTGTCCTGCCAAATGTATCAGCGATCGGCCGATGTTGGCTTGGGCGTA 284415 Query 34679 CCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729 |||||||||||||| || ||| | ||||| || |||||||||| |||||| Sbjct 284416 CCGTTCAACATTGCCAGCTACTCACTGCTGACCCACATGATCGCGCATGTC 284466 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 |||||| |||||||||| || ||||| | ||| || |||||||||||||| || || || Sbjct 284466 GACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAACGGTACGCCCAA 284407 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 || | || ||||||| ||||| | |||||||||||||| |||| || ||| | || Sbjct 284406 GCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATCAGCAACGAAAAA 284347 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGC 6795 || | ||||||||| || || ||||| || | || || ||||| || Sbjct 284346 CTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGAAGGATTCCAAGC 284287 Query 6796 GCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846 || ||| | ||||| | || | ||| || ||||| ||||||||||| Sbjct 284286 GCTCATAATGATCCGACGATCGTAAGGATTGTTTTTCAATGTGTCGATCAC 284236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447978930064800