Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq1559 114 1e-20
seq109 114 1e-20
>seq1559
Length=79761
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675
|||||| |||||||||| || ||||| | ||| || |||||||||||||| || || ||
Sbjct 22976 GACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAACGGTACGCCCAA 23035
Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735
|| | || ||||||| ||||| | |||||||||||||| |||| || ||| | ||
Sbjct 23036 GCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATCAGCAACGAAAAA 23095
Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGC 6795
|| | ||||||||| || || ||||| || | || || ||||| ||
Sbjct 23096 CTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGAAGGATTCCAAGC 23155
Query 6796 GCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846
|| ||| | ||||| | || | ||| || ||||| |||||||||||
Sbjct 23156 GCTCATAATGATCCGACGATCGTAAGGATTGTTTTTCAATGTGTCGATCAC 23206
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 34499 GTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAAC 34558
||||||||||| ||||| || ||| | || | ||||| | ||| |||| |||||
Sbjct 23206 GTGATCGACACATTGAAAAACAATCCTTACGATCGTCGGATCATTATGAGCGCTTGGAAT 23147
Query 34559 CCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC 34618
|| || | || ||||| || || ||||||||| | || || | |||
Sbjct 23146 CCTTCCGACATTCCCAACATGGCCCTGCCGCCGTGCCACTGTTTGGCACAGTTTTTCGTT 23087
Query 34619 GCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTG 34678
|| |||| |||||||||||||| | ||||| ||||||| || | || || || ||
Sbjct 23086 GCTGATGGAGAGCTGTCCTGCCAAATGTATCAGCGATCGGCCGATGTTGGCTTGGGCGTA 23027
Query 34679 CCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729
|||||||||||||| || ||| | ||||| || |||||||||| ||||||
Sbjct 23026 CCGTTCAACATTGCCAGCTACTCACTGCTGACCCACATGATCGCGCATGTC 22976
>seq109
Length=460762
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 34499 GTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAAC 34558
||||||||||| ||||| || ||| | || | ||||| | ||| |||| |||||
Sbjct 284236 GTGATCGACACATTGAAAAACAATCCTTACGATCGTCGGATCATTATGAGCGCTTGGAAT 284295
Query 34559 CCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC 34618
|| || | || ||||| || || ||||||||| | || || | |||
Sbjct 284296 CCTTCCGACATTCCCAACATGGCCCTGCCGCCGTGCCACTGTTTGGCACAGTTTTTCGTT 284355
Query 34619 GCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTG 34678
|| |||| |||||||||||||| | ||||| ||||||| || | || || || ||
Sbjct 284356 GCTGATGGAGAGCTGTCCTGCCAAATGTATCAGCGATCGGCCGATGTTGGCTTGGGCGTA 284415
Query 34679 CCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729
|||||||||||||| || ||| | ||||| || |||||||||| ||||||
Sbjct 284416 CCGTTCAACATTGCCAGCTACTCACTGCTGACCCACATGATCGCGCATGTC 284466
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675
|||||| |||||||||| || ||||| | ||| || |||||||||||||| || || ||
Sbjct 284466 GACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAACGGTACGCCCAA 284407
Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735
|| | || ||||||| ||||| | |||||||||||||| |||| || ||| | ||
Sbjct 284406 GCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATCAGCAACGAAAAA 284347
Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGC 6795
|| | ||||||||| || || ||||| || | || || ||||| ||
Sbjct 284346 CTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGAAGGATTCCAAGC 284287
Query 6796 GCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846
|| ||| | ||||| | || | ||| || ||||| |||||||||||
Sbjct 284286 GCTCATAATGATCCGACGATCGTAAGGATTGTTTTTCAATGTGTCGATCAC 284236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447978930064800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |