Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq561 87.8 1e-12
>seq561
Length=219668
Score = 87.8 bits (96), Expect = 1e-12
Identities = 161/236 (68%), Gaps = 10/236 (4%)
Strand=Plus/Plus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
||||||||||| |||||||| ||||| || || || || || |||| ||||||
Sbjct 139805 AAAATGCAAATCTTTGTGAAGACTCTGACCGGAAAGACCATCACCCTTGAGGTCGAACCA 139864
Query 27847 ACCGACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGA 27901
||||| ||||||| || || || || ||||| ||||| | ||
Sbjct 139865 TCCGAC-----ACAATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCC 139919
Query 27902 TGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCG 27961
||| ||||| || | || |||||||| || || ||||| || | |||| | ||||||
Sbjct 139920 CGGATCAGCAGCGTCTGATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCG 139979
Query 27962 ATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017
| || ||||| || || || ||| | ||| |||| ||||| ||||||| |||
Sbjct 139980 ACTATAACATTCAGAAGGAATCCACCCTCCATCTGGTCCTGCGTCTGCGTGGTGGC 140035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355642987476930
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |