Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq561 87.8 1e-12 >seq561 Length=219668 Score = 87.8 bits (96), Expect = 1e-12 Identities = 161/236 (68%), Gaps = 10/236 (4%) Strand=Plus/Plus Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846 ||||||||||| |||||||| ||||| || || || || || |||| |||||| Sbjct 139805 AAAATGCAAATCTTTGTGAAGACTCTGACCGGAAAGACCATCACCCTTGAGGTCGAACCA 139864 Query 27847 ACCGACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGA 27901 ||||| ||||||| || || || || ||||| ||||| | || Sbjct 139865 TCCGAC-----ACAATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCC 139919 Query 27902 TGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCG 27961 ||| ||||| || | || |||||||| || || ||||| || | |||| | |||||| Sbjct 139920 CGGATCAGCAGCGTCTGATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCG 139979 Query 27962 ATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 | || ||||| || || || ||| | ||| |||| ||||| ||||||| ||| Sbjct 139980 ACTATAACATTCAGAAGGAATCCACCCTCCATCTGGTCCTGCGTCTGCGTGGTGGC 140035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355642987476930