Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq2250 120 2e-22
seq843 104 2e-17
seq701 104 2e-17
seq561 95.1 8e-15
>seq2250
Length=42400
Score = 120 bits (132), Expect = 2e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| ||||| |||||||| || || ||||| ||||| || || | ||
Sbjct 16838 ATGCAGATTTTCGTGAAAACACTCACGGGCAAGACCATCACACTCGAGGTCGAGCCATCG 16897
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | ||| | || | | || || ||||| | || ||||||||
Sbjct 16898 GACACGATCGAGAATGTGAAAGCCAAGA-TCCAGGATAAGGAAGGAATTCCTCCAGATCA 16956
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || ||||||||||| || |||||||| | ||||| | ||| |||||
Sbjct 16957 GCAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCCGACTACAA 17016
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || || |||||
Sbjct 17017 CATTCAGAAGGAATCCAC 17034
>seq843
Length=160513
Score = 104 bits (114), Expect = 2e-17
Identities = 145/201 (72%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||| ||||| |||||||||||||| || || || ||||| || || || |
Sbjct 69066 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACTCTTGAGGTCGAACCA 69007
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
|||| || | || ||| | || | || || ||||| || || | ||||| ||
Sbjct 69006 TCGGATACGATCGAGAATGTGAAGGC-GAAGATCCAGGACAAGGAGGGCATCCCGCCCGA 68948
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||| |||||| | || || ||||| || || ||||| |||| |||||| | ||| ||
Sbjct 68947 TCAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTA 68888
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || || ||||| ||
Sbjct 68887 CAACATCCAGAAGGAGTCGAC 68867
>seq701
Length=187196
Score = 104 bits (114), Expect = 2e-17
Identities = 145/201 (72%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||| ||||| |||||||||||||| || || || ||||| || || || |
Sbjct 176621 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACTCTTGAGGTCGAACCA 176680
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
|||| || | || ||| | || | || || ||||| || || | ||||| ||
Sbjct 176681 TCGGATACGATCGAGAATGTGAAGGC-GAAGATCCAGGACAAGGAGGGCATCCCGCCCGA 176739
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||| |||||| | || || ||||| || || ||||| |||| |||||| | ||| ||
Sbjct 176740 TCAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTA 176799
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || || ||||| ||
Sbjct 176800 CAACATCCAGAAGGAGTCGAC 176820
Score = 104 bits (114), Expect = 2e-17
Identities = 145/201 (72%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||| ||||| |||||||||||||| || || || ||||| || || || |
Sbjct 183390 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACTCTTGAGGTCGAACCA 183449
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
|||| || | || ||| | || | || || ||||| || || | ||||| ||
Sbjct 183450 TCGGATACGATCGAGAATGTGAAGGC-GAAGATCCAGGACAAGGAGGGCATCCCGCCCGA 183508
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||| |||||| | || || ||||| || || ||||| |||| |||||| | ||| ||
Sbjct 183509 TCAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTA 183568
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || || ||||| ||
Sbjct 183569 CAACATCCAGAAGGAGTCGAC 183589
>seq561
Length=219668
Score = 95.1 bits (104), Expect = 8e-15
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || || || || ||||| || ||||| || || || || | |
Sbjct 140492 ATGCAGATCTTCGTCAAGACACTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCC 140551
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || | || ||||| ||||| | || ||||||||
Sbjct 140552 GACACCATCGAGAATGTGAAGGCCAAGA-TTCAGGACAAGGAAGGAATCCCCCCAGATCA 140610
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || ||||||||||| || ||||||| | ||||| | ||| || ||
Sbjct 140611 GCAGCGTCTCATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAA 140670
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
||| || || || ||||| | ||| | || || | |||| || |||
Sbjct 140671 CATTCAGAAGGAATCCACCCTCCATCTGGTCTTGCGTCTGCGTGGTGGA 140719
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || || || || ||||| || ||||| || || || || | |
Sbjct 140264 ATGCAGATCTTCGTCAAGACTCTGACCGGAAAGACCATCACCCTGGAGGTCGAACCATCC 140323
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || | || ||||| ||||| | || || |||||
Sbjct 140324 GACACCATCGAGAATGTGAAGGCCAAGA-TTCAGGACAAGGAAGGAATCCCCCCGGATCA 140382
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || ||||||||||| ||| ||||||| | ||||| | ||| || ||
Sbjct 140383 GCAGCGTCTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACCCTGTCCGACTATAA 140442
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || || |||||
Sbjct 140443 CATTCAGAAGGAATCCAC 140460
Score = 89.7 bits (98), Expect = 3e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || || || || ||||| || ||||| || || || || | |
Sbjct 140036 ATGCAGATCTTCGTCAAGACGCTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCC 140095
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || | || ||||| ||||| | || || |||||
Sbjct 140096 GACACCATCGAGAATGTGAAGGCCAAGA-TTCAGGACAAGGAAGGAATCCCCCCGGATCA 140154
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || ||||||||||| || ||||||| | ||||| | ||| || ||
Sbjct 140155 GCAGCGTCTGATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAA 140214
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || || |||||
Sbjct 140215 CATTCAGAAGGAATCCAC 140232
Score = 86.0 bits (94), Expect = 4e-12
Identities = 141/201 (70%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|||||||| || || || || || || || ||||| || ||||| || || || || |
Sbjct 139805 AAAATGCAAATCTTTGTGAAGACTCTGACCGGAAAGACCATCACCCTTGAGGTCGAACCA 139864
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| ||||| | || ||| | || | || | || ||||| ||||| | || || ||
Sbjct 139865 TCCGACACAATCGAGAATGTGAAGGCCAAGA-TTCAGGACAAGGAAGGAATCCCCCCGGA 139923
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||| |||||| | || ||||||||||| || ||||||| | ||||| | ||| ||
Sbjct 139924 TCAGCAGCGTCTGATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTA 139983
Query 23787 CAACATACAAAAAGAGTCCAC 23807
||||| || || || |||||
Sbjct 139984 TAACATTCAGAAGGAATCCAC 140004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337801194899720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |