Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq2250 120 2e-22 seq843 104 2e-17 seq701 104 2e-17 seq561 95.1 8e-15 >seq2250 Length=42400 Score = 120 bits (132), Expect = 2e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| ||||| |||||||| || || ||||| ||||| || || | || Sbjct 16838 ATGCAGATTTTCGTGAAAACACTCACGGGCAAGACCATCACACTCGAGGTCGAGCCATCG 16897 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | ||| | || | | || || ||||| | || |||||||| Sbjct 16898 GACACGATCGAGAATGTGAAAGCCAAGA-TCCAGGATAAGGAAGGAATTCCTCCAGATCA 16956 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || ||||||||||| || |||||||| | ||||| | ||| ||||| Sbjct 16957 GCAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCCGACTACAA 17016 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || || ||||| Sbjct 17017 CATTCAGAAGGAATCCAC 17034 >seq843 Length=160513 Score = 104 bits (114), Expect = 2e-17 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| ||||| |||||||||||||| || || || ||||| || || || | Sbjct 69066 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACTCTTGAGGTCGAACCA 69007 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 |||| || | || ||| | || | || || ||||| || || | ||||| || Sbjct 69006 TCGGATACGATCGAGAATGTGAAGGC-GAAGATCCAGGACAAGGAGGGCATCCCGCCCGA 68948 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||| |||||| | || || ||||| || || ||||| |||| |||||| | ||| || Sbjct 68947 TCAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTA 68888 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || || ||||| || Sbjct 68887 CAACATCCAGAAGGAGTCGAC 68867 >seq701 Length=187196 Score = 104 bits (114), Expect = 2e-17 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| ||||| |||||||||||||| || || || ||||| || || || | Sbjct 176621 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACTCTTGAGGTCGAACCA 176680 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 |||| || | || ||| | || | || || ||||| || || | ||||| || Sbjct 176681 TCGGATACGATCGAGAATGTGAAGGC-GAAGATCCAGGACAAGGAGGGCATCCCGCCCGA 176739 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||| |||||| | || || ||||| || || ||||| |||| |||||| | ||| || Sbjct 176740 TCAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTA 176799 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || || ||||| || Sbjct 176800 CAACATCCAGAAGGAGTCGAC 176820 Score = 104 bits (114), Expect = 2e-17 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| ||||| |||||||||||||| || || || ||||| || || || | Sbjct 183390 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACTCTTGAGGTCGAACCA 183449 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 |||| || | || ||| | || | || || ||||| || || | ||||| || Sbjct 183450 TCGGATACGATCGAGAATGTGAAGGC-GAAGATCCAGGACAAGGAGGGCATCCCGCCCGA 183508 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||| |||||| | || || ||||| || || ||||| |||| |||||| | ||| || Sbjct 183509 TCAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTA 183568 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || || ||||| || Sbjct 183569 CAACATCCAGAAGGAGTCGAC 183589 >seq561 Length=219668 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || || || ||||| || ||||| || || || || | | Sbjct 140492 ATGCAGATCTTCGTCAAGACACTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCC 140551 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || | || ||||| ||||| | || |||||||| Sbjct 140552 GACACCATCGAGAATGTGAAGGCCAAGA-TTCAGGACAAGGAAGGAATCCCCCCAGATCA 140610 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || ||||||||||| || ||||||| | ||||| | ||| || || Sbjct 140611 GCAGCGTCTCATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAA 140670 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| || || || ||||| | ||| | || || | |||| || ||| Sbjct 140671 CATTCAGAAGGAATCCACCCTCCATCTGGTCTTGCGTCTGCGTGGTGGA 140719 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || || || ||||| || ||||| || || || || | | Sbjct 140264 ATGCAGATCTTCGTCAAGACTCTGACCGGAAAGACCATCACCCTGGAGGTCGAACCATCC 140323 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || | || ||||| ||||| | || || ||||| Sbjct 140324 GACACCATCGAGAATGTGAAGGCCAAGA-TTCAGGACAAGGAAGGAATCCCCCCGGATCA 140382 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || ||||||||||| ||| ||||||| | ||||| | ||| || || Sbjct 140383 GCAGCGTCTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACCCTGTCCGACTATAA 140442 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || || ||||| Sbjct 140443 CATTCAGAAGGAATCCAC 140460 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || || || ||||| || ||||| || || || || | | Sbjct 140036 ATGCAGATCTTCGTCAAGACGCTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCC 140095 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || | || ||||| ||||| | || || ||||| Sbjct 140096 GACACCATCGAGAATGTGAAGGCCAAGA-TTCAGGACAAGGAAGGAATCCCCCCGGATCA 140154 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || ||||||||||| || ||||||| | ||||| | ||| || || Sbjct 140155 GCAGCGTCTGATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAA 140214 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || || ||||| Sbjct 140215 CATTCAGAAGGAATCCAC 140232 Score = 86.0 bits (94), Expect = 4e-12 Identities = 141/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||| || || || || || || || ||||| || ||||| || || || || | Sbjct 139805 AAAATGCAAATCTTTGTGAAGACTCTGACCGGAAAGACCATCACCCTTGAGGTCGAACCA 139864 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| | || ||| | || | || | || ||||| ||||| | || || || Sbjct 139865 TCCGACACAATCGAGAATGTGAAGGCCAAGA-TTCAGGACAAGGAAGGAATCCCCCCGGA 139923 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||| |||||| | || ||||||||||| || ||||||| | ||||| | ||| || Sbjct 139924 TCAGCAGCGTCTGATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTA 139983 Query 23787 CAACATACAAAAAGAGTCCAC 23807 ||||| || || || ||||| Sbjct 139984 TAACATTCAGAAGGAATCCAC 140004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337801194899720