Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq569 132 4e-26 seq1541 122 7e-23 >seq569 Length=217393 Score = 132 bits (146), Expect = 4e-26 Identities = 272/399 (68%), Gaps = 8/399 (2%) Strand=Plus/Minus Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATT 4433 ||||| || || || ||||| || || |||||| ||| ||||||||||| || || | Sbjct 206571 AGCAAACGATCGGCCACAAACTCAATGTACTGGGACATCAGTTCGCAGTTCATGCCGAGC 206512 Query 4434 A-ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492 | ||| ||| || || || | |||||||| ||||| || || ||| || || ||| Sbjct 206511 ATATC-CACCGGCAGGGCTTTCGTCAAAAATTCTTGCTCGATCACTACCGCATCACGGAT 206453 Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGC 4552 || || | | || || || || || | || | || | |||| || ||||| Sbjct 206452 GATCTCCGTCACGCGCTCCTTCGACGGCTTCTGCACCAGATACCTGAACATTAGGCACGC 206393 Query 4553 AAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGG 4612 ||||| |||||||| || ||||| | |||||| ||||| || ||||| | ||||| Sbjct 206392 GAAATCGCAATGCAATCCCTCGTCGCGCGAAATCAGCTCGTTCGAGAACGTCAGCCCGGG 206333 Query 4613 CATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCC 4672 ||| | |||| ||| || ||||| || || | ||||| || ||||| || || Sbjct 206332 CATCAGGCCTCGCTTCTTCAGCCAGAAAATGGACGCAAAGCTACCGCTGAAGAAGATACC 206273 Query 4673 TTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT--CTTTA-AT 4729 || ||||| |||||||| || | || || | || |||| || | || | || Sbjct 206272 CTCGACGGCCGCAAACGCGACCACACGTTCGCCAA---AGTTGGCCTTCTTGCTCGAGAT 206216 Query 4730 CCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGG 4768 ||| || | ||||||| ||| || ||||| |||||||| Sbjct 206215 CCAGTTAAGGGCCCAGTCAGCCTTCTTCTTCACGCACGG 206177 Score = 89.7 bits (98), Expect = 4e-13 Identities = 163/239 (68%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 4842 TACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCT 4901 ||||| || ||| | |||||| || ||||||||||| ||||| ||||| | || || Sbjct 206033 TACATCTCGCTATGCACATTTTCCATCGCAATCTGAAAGCCGTAGAAGCAGCGTGCCTCC 205974 Query 4902 GTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTG 4961 ||||| || ||||| | | || | ||| || | |||||||| || || || ||| Sbjct 205973 GTTACCTGCACTTCCTGGCTGAAGCGTTCCACCAGATTTTCGTTCACAATGCCATCAGAC 205914 Query 4962 GCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTC 5021 || ||||| || |||| || || || || || | ||||| ||||| | | | Sbjct 205913 GCAGCAAAGAAGGCCAGCACGTGCGAGATGAAATGACGTTCGCTCGGCTTCAACGCGTCC 205854 Query 5022 CAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 |||| || || || | || || || ||||| || |||||||| || ||||| || Sbjct 205853 CAGTCCTTCATGTCCTTCGATAGGTCCACCTCTTCCACGGTCCAAAAGGATGCTTCGGC 205795 >seq1541 Length=81579 Score = 122 bits (134), Expect = 7e-23 Identities = 272/401 (68%), Gaps = 12/401 (3%) Strand=Plus/Minus Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATT 4433 ||||| || || || ||||| || || ||||| ||| ||||||||||| || || | Sbjct 59891 AGCAAACGATCGGCCACAAACTCAATGTACTGCGACATCAGTTCGCAGTTCATGCCGAGC 59832 Query 4434 A-ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492 | ||| ||| || || || | |||||||| ||||| || || ||| || || ||| Sbjct 59831 ATATC-CACTGGCAGGGCTTTCGTCAAAAATTCTTGCTCGATCACTACCGCATCACGGAT 59773 Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGC 4552 || || | | || || || || || | || | || | |||| || ||||| Sbjct 59772 GATCTCCGTCACGCGCTCCTTCGACGGCTTCTGCACCAGATACCTGAACATTAGGCACGC 59713 Query 4553 AAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGG 4612 ||||| |||||||| || ||||| | |||||| ||||| || ||||| | ||||| Sbjct 59712 GAAATCGCAATGCAATCCCTCGTCGCGCGAAATCAGCTCGTTCGAGAACGTCAGCCCGGG 59653 Query 4613 CATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAA--TGACCCAGAAAAGAATATG 4670 ||| | || | ||| || ||||| || || | ||||| || | | | ||||| || Sbjct 59652 CATCAGGCCACGCTTCTTCAGCCAGAAAATGGACGCAAAGCTGCCGCTG--AAGAAGATA 59595 Query 4671 CCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT--CTTTA- 4727 || || ||||| |||||||| || | || || | || |||| || | || | Sbjct 59594 CCCTCGACGGCAGCAAACGCGACCACACGTTCGCCAA---AGTTGGCCTTCTTGCTCGAG 59538 Query 4728 ATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGG 4768 ||||| || | ||||||| || || ||||| |||||||| Sbjct 59537 ATCCAGTTAAGGGCCCAGTCGGCCTTCTTCTTCACGCACGG 59497 Score = 89.7 bits (98), Expect = 4e-13 Identities = 163/239 (68%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 4842 TACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCT 4901 ||||| || ||| | |||||| || ||||||||||| ||||| ||||| | || || Sbjct 59356 TACATCTCGCTATGCACATTTTCCATCGCAATCTGAAAGCCGTAGAAGCAGCGTGCCTCC 59297 Query 4902 GTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTG 4961 ||||| || ||||| | | || | ||| || | |||||||| || || || ||| Sbjct 59296 GTTACCTGCACTTCCTGGCTGAAGCGTTCCACCAGATTTTCGTTCACGATGCCATCAGAC 59237 Query 4962 GCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTC 5021 || ||||| || |||| || || || || || | ||||| ||||| | | | Sbjct 59236 GCAGCAAAGAAGGCCAGCACGTGCGAGATGAAATGACGTTCGCTCGGCTTCAACGCGTCC 59177 Query 5022 CAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 |||| || || || | || || || ||||| || |||||||| || ||||| || Sbjct 59176 CAGTCCTTCATGTCCTTCGATAGGTCCACCTCTTCCACGGTCCAAAAGGATGCTTCGGC 59118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426786295896470