Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1559 105 5e-18 seq109 105 5e-18 >seq1559 Length=79761 Score = 105 bits (116), Expect = 5e-18 Identities = 232/345 (67%), Gaps = 2/345 (1%) Strand=Plus/Plus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || ||||| || || ||||||| || || || ||||||||||| ||||| || ||| Sbjct 22968 AGTCCAGTGACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAACGGT 23027 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || | || | || |||| | ||| || | || || || ||||||||||| Sbjct 23028 ACGCCCAAGCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATCAGCA 23087 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 27387 ||| ||||||| | ||||||||| || || |||||| | | ||| || Sbjct 23088 ACGAAAAACTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGAAGGA 23147 Query 27388 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 27447 ||||| |||| || ||||| || | || | || ||||| | | ||| | | Sbjct 23148 TTCCAAGCGCTCATAATGATCCGACGATCGTAAGGATTGTTTTTCAATGTGTCGATCACC 23207 Query 27448 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTC-TACCCTCATGTCCGTGTACTCTGC 27506 ||| || |||||| | || |||||| ||| || | ||||| ||||| ||| Sbjct 23208 TTTGCCAACTGATCGATTCCTTTCCCCGTGTAATCGTCGTGACATGT-TTTGTACGTTGC 23266 Query 27507 TCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551 || || || | ||| || || |||||||||||||| ||||| || Sbjct 23267 ACCAAAGTGACGCCACTGAAAACCGTACACCGGTCCTAGGTCACC 23311 >seq109 Length=460762 Score = 105 bits (116), Expect = 5e-18 Identities = 232/345 (67%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || ||||| || || ||||||| || || || ||||||||||| ||||| || ||| Sbjct 284474 AGTCCAGTGACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAACGGT 284415 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || | || | || |||| | ||| || | || || || ||||||||||| Sbjct 284414 ACGCCCAAGCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATCAGCA 284355 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 27387 ||| ||||||| | ||||||||| || || |||||| | | ||| || Sbjct 284354 ACGAAAAACTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGAAGGA 284295 Query 27388 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 27447 ||||| |||| || ||||| || | || | || ||||| | | ||| | | Sbjct 284294 TTCCAAGCGCTCATAATGATCCGACGATCGTAAGGATTGTTTTTCAATGTGTCGATCACC 284235 Query 27448 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTC-TACCCTCATGTCCGTGTACTCTGC 27506 ||| || |||||| | || |||||| ||| || | ||||| ||||| ||| Sbjct 284234 TTTGCCAACTGATCGATTCCTTTCCCCGTGTAATCGTCGTGACATGT-TTTGTACGTTGC 284176 Query 27507 TCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551 || || || | ||| || || |||||||||||||| ||||| || Sbjct 284175 ACCAAAGTGACGCCACTGAAAACCGTACACCGGTCCTAGGTCACC 284131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369279374562290