Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq1559 105 5e-18
seq109 105 5e-18
>seq1559
Length=79761
Score = 105 bits (116), Expect = 5e-18
Identities = 232/345 (67%), Gaps = 2/345 (1%)
Strand=Plus/Plus
Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267
|| || ||||| || || ||||||| || || || ||||||||||| ||||| || |||
Sbjct 22968 AGTCCAGTGACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAACGGT 23027
Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327
|| || | || | || |||| | ||| || | || || || |||||||||||
Sbjct 23028 ACGCCCAAGCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATCAGCA 23087
Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 27387
||| ||||||| | ||||||||| || || |||||| | | ||| ||
Sbjct 23088 ACGAAAAACTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGAAGGA 23147
Query 27388 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 27447
||||| |||| || ||||| || | || | || ||||| | | ||| | |
Sbjct 23148 TTCCAAGCGCTCATAATGATCCGACGATCGTAAGGATTGTTTTTCAATGTGTCGATCACC 23207
Query 27448 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTC-TACCCTCATGTCCGTGTACTCTGC 27506
||| || |||||| | || |||||| ||| || | ||||| ||||| |||
Sbjct 23208 TTTGCCAACTGATCGATTCCTTTCCCCGTGTAATCGTCGTGACATGT-TTTGTACGTTGC 23266
Query 27507 TCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551
|| || || | ||| || || |||||||||||||| ||||| ||
Sbjct 23267 ACCAAAGTGACGCCACTGAAAACCGTACACCGGTCCTAGGTCACC 23311
>seq109
Length=460762
Score = 105 bits (116), Expect = 5e-18
Identities = 232/345 (67%), Gaps = 2/345 (1%)
Strand=Plus/Minus
Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267
|| || ||||| || || ||||||| || || || ||||||||||| ||||| || |||
Sbjct 284474 AGTCCAGTGACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAACGGT 284415
Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327
|| || | || | || |||| | ||| || | || || || |||||||||||
Sbjct 284414 ACGCCCAAGCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATCAGCA 284355
Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 27387
||| ||||||| | ||||||||| || || |||||| | | ||| ||
Sbjct 284354 ACGAAAAACTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGAAGGA 284295
Query 27388 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 27447
||||| |||| || ||||| || | || | || ||||| | | ||| | |
Sbjct 284294 TTCCAAGCGCTCATAATGATCCGACGATCGTAAGGATTGTTTTTCAATGTGTCGATCACC 284235
Query 27448 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTC-TACCCTCATGTCCGTGTACTCTGC 27506
||| || |||||| | || |||||| ||| || | ||||| ||||| |||
Sbjct 284234 TTTGCCAACTGATCGATTCCTTTCCCCGTGTAATCGTCGTGACATGT-TTTGTACGTTGC 284176
Query 27507 TCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551
|| || || | ||| || || |||||||||||||| ||||| ||
Sbjct 284175 ACCAAAGTGACGCCACTGAAAACCGTACACCGGTCCTAGGTCACC 284131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369279374562290
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |