Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq1559 87.8 7e-13 seq109 87.8 7e-13 >seq1559 Length=79761 Score = 87.8 bits (96), Expect = 7e-13 Identities = 86/109 (79%), Gaps = 4/109 (4%) Strand=Plus/Minus Query 52149 GTAGCTGAAGGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTT--CTTGG 52206 || ||||| || |||| || ||||| |||||||||| || ||||| |||| ||||| Sbjct 23089 GTTGCTGATGGAGAGCTGTCCTGCCAAATGTATCAGCGATCGGCCGA--TGTTGGCTTGG 23032 Query 52207 GCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGC 52255 |||| ||||| |||||||||||||| || ||||||| || |||| || Sbjct 23031 GCGTACCGTTCAACATTGCCAGCTACTCACTGCTGACCCACATGATCGC 22983 >seq109 Length=460762 Score = 87.8 bits (96), Expect = 7e-13 Identities = 86/109 (79%), Gaps = 4/109 (4%) Strand=Plus/Plus Query 52149 GTAGCTGAAGGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTT--CTTGG 52206 || ||||| || |||| || ||||| |||||||||| || ||||| |||| ||||| Sbjct 284353 GTTGCTGATGGAGAGCTGTCCTGCCAAATGTATCAGCGATCGGCCGA--TGTTGGCTTGG 284410 Query 52207 GCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGC 52255 |||| ||||| |||||||||||||| || ||||||| || |||| || Sbjct 284411 GCGTACCGTTCAACATTGCCAGCTACTCACTGCTGACCCACATGATCGC 284459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189981798639900