Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq98 156 3e-33 seq843 149 5e-31 seq701 149 5e-31 seq2250 145 5e-30 seq561 143 2e-29 >seq98 Length=483913 Score = 156 bits (172), Expect = 3e-33 Identities = 174/230 (76%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168 ||||||| | |||| | |||| |||||| || |||||| ||||||||||| |||| Sbjct 465174 TTCCCCCGCGAAGTCGAAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 465115 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 || || | || || |||||||| ||||| |||||||||||||||||||||| || Sbjct 465114 ACAGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAG 465055 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287 | | ||| ||||| ||| ||||| ||||| |||| | || ||||| | || || Sbjct 465054 GAATACCCTCCTTGTCCTGGATCTTAGCCTTCAC-GTTCTCGATCGTGTCCGAGGGCTCG 464996 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| ||| || ||||| || || || |||||||||||||| ||||| Sbjct 464995 ACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 464946 Score = 150 bits (166), Expect = 1e-31 Identities = 173/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168 ||||||| | |||| | |||| |||||| || |||||| || |||||||| |||| Sbjct 465636 TTCCCCCGCGAAGTCGAAGAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGG 465577 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 || || | || || |||||||| ||||| |||||||||||||||||||||| || Sbjct 465576 ACAGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAG 465517 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287 | | ||| ||||| ||| ||||| ||||| |||| | || ||||| | || || Sbjct 465516 GAATACCCTCCTTGTCCTGGATCTTAGCCTTCAC-GTTCTCGATCGTGTCCGAGGGCTCG 465458 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| ||| || ||||| || || || |||||||||||||| ||||| Sbjct 465457 ACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 465408 Score = 138 bits (152), Expect = 8e-28 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| ||||||||||| |||| || || | || || |||||||| ||||| || Sbjct 464909 CTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAA 464850 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 |||||||||||||||||||| ||| | ||| ||||| ||| ||||| ||||| || Sbjct 464849 GATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGGATCTTAGCCTTCAC-GT 464791 Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | || ||||| | | || ||||||| ||| || ||||| || || || ||||||| Sbjct 464790 TCTCGATCGTGTCCGAAGGCTCGACCTCCAACGTGATGGTCTTGCCAGTCAGCGTCTTCA 464731 Query 44325 CGAAGATTTGCAT 44337 ||||||| ||||| Sbjct 464730 CGAAGATCTGCAT 464718 Score = 134 bits (148), Expect = 1e-26 Identities = 147/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| ||||||||||| |||| || || | || || |||||||| ||||| || Sbjct 464681 CTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAA 464622 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 |||||||||||||||||||| ||| | ||| ||||| ||| ||||| ||||| || Sbjct 464621 GATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGGATCTTAGCCTTCAC-GT 464563 Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | || ||||| | | || ||||||| ||| || ||||| || || | ||||||| Sbjct 464562 TCTCGATCGTGTCCGAAGGCTCGACCTCCAACGTGATGGTCTTGCCAGTCAACGTCTTCA 464503 Query 44325 CGAAGATTTGCAT 44337 | ||||||||||| Sbjct 464502 CAAAGATTTGCAT 464490 >seq843 Length=160513 Score = 149 bits (164), Expect = 5e-31 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 |||||||||||| || |||||| ||||||||||| |||| || ||| |||| || Sbjct 68854 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTC 68913 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| ||||| ||||||| |||||||||||| | || | || ||||| ||| Sbjct 68914 CAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTG 68973 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||||| | | || || || | | ||| ||||| | ||||| ||||| Sbjct 68974 GATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTT 69033 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||| || |||||||| ||||| Sbjct 69034 ACCCGTGAGGGTTTTGACGAAGATCTGCAT 69063 >seq701 Length=187196 Score = 149 bits (164), Expect = 5e-31 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 |||||||||||| || |||||| ||||||||||| |||| || ||| |||| || Sbjct 176833 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTC 176774 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| ||||| ||||||| |||||||||||| | || | || ||||| ||| Sbjct 176773 CAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTG 176714 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||||| | | || || || | | ||| ||||| | ||||| ||||| Sbjct 176713 GATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTT 176654 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||| || |||||||| ||||| Sbjct 176653 ACCCGTGAGGGTTTTGACGAAGATCTGCAT 176624 Score = 149 bits (164), Expect = 5e-31 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 |||||||||||| || |||||| ||||||||||| |||| || ||| |||| || Sbjct 183602 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTC 183543 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| ||||| ||||||| |||||||||||| | || | || ||||| ||| Sbjct 183542 CAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTG 183483 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||||| | | || || || | | ||| ||||| | ||||| ||||| Sbjct 183482 GATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTT 183423 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||| || |||||||| ||||| Sbjct 183422 ACCCGTGAGGGTTTTGACGAAGATCTGCAT 183393 >seq2250 Length=42400 Score = 145 bits (160), Expect = 5e-30 Identities = 167/222 (75%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||| || |||||| ||||| ||| ||||| || |||||||| |||| || ||| Sbjct 17055 AGTCGCAGCACCAGATGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGA 16996 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||||||| ||||||||||| | |||||||||||||| ||| | |||||| Sbjct 16995 CCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGAATTCCTTCC 16936 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGT 44298 || ||| ||||| |||| | ||| | || ||||| | | || ||||| | || Sbjct 16935 TTATCCTGGATCTT-GGCTTTCACATTCTCGATCGTGTCCGATGGCTCGACCTCGAGTGT 16877 Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 || ||||| |||||||| || |||||||| || |||||||| Sbjct 16876 GATGGTCTTGCCCGTGAGTGTTTTCACGAAAATCTGCATGAT 16835 >seq561 Length=219668 Score = 143 bits (158), Expect = 2e-29 Identities = 176/239 (74%), Gaps = 1/239 (0%) Strand=Plus/Minus Query 44101 TTATTTCA-TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGT 44159 |||||| | |||| || | ||| | ||| ||||| || || ||| ||||| || |||| Sbjct 140729 TTATTTAAATTCCACCACGCAGACGCAAGACCAGATGGAGGGTGGATTCCTTCTGAATGT 140670 Query 44160 TGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCT 44219 | || |||| || ||| | || |||| |||||| ||||||||||| | |||||||| Sbjct 140669 TATAGTCGGACAGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGCTGCT 140610 Query 44220 GATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGG 44279 |||||| || | |||||||| ||| ||||| ||||| | | |||||||||| Sbjct 140609 GATCTGGGGGGATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGG 140550 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | ||| ||||| | || || |||||||| || || ||||| |||||||| |||||| Sbjct 140549 ATGGTTCGACCTCAAGGGTGATGGTCTTTCCGGTCAGTGTCTTGACGAAGATCTGCATG 140491 Score = 134 bits (148), Expect = 1e-26 Identities = 169/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | || ||||| || || ||| ||||| || ||||| || || Sbjct 140266 CATGCCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTC 140207 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| | || |||| |||||| ||||||||||||| |||||||||||| | Sbjct 140206 GGACAGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGG 140147 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| ||| ||||| ||||| | | |||||||||| | ||| Sbjct 140146 GGGGATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTC 140087 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| | || || |||||||| || || ||||| |||||||| |||||| Sbjct 140086 GACCTCAAGGGTGATGGTCTTTCCGGTCAGCGTCTTGACGAAGATCTGCATG 140035 Score = 134 bits (148), Expect = 1e-26 Identities = 169/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | || ||||| || || ||| ||||| || ||||| || || Sbjct 140494 CATGCCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTC 140435 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| | || |||| ||||| ||||||||||||| |||||||||||| | Sbjct 140434 GGACAGGGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGG 140375 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| ||| ||||| ||||| | | |||||||||| | ||| Sbjct 140374 GGGGATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTC 140315 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||| || || |||||||| || || ||||| |||||||| |||||| Sbjct 140314 GACCTCCAGGGTGATGGTCTTTCCGGTCAGAGTCTTGACGAAGATCTGCATG 140263 Score = 132 bits (146), Expect = 3e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | || ||||| || || ||| ||||| || ||||| || || Sbjct 140038 CATGCCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTC 139979 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| | || |||| |||||| ||||||||||||| |||||||||||| | Sbjct 139978 GGACAGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGG 139919 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| ||| ||||| ||||| | | || ||||||| | ||| Sbjct 139918 GGGGATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATTGTGTCGGATGGTTC 139859 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || || |||||||| || || |||||||| ||||||||||| Sbjct 139858 GACCTCAAGGGTGATGGTCTTTCCGGTCAGAGTCTTCACAAAGATTTGCAT 139808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359768442294030