Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq561 141 9e-29 seq98 125 7e-24 seq2250 123 2e-23 >seq561 Length=219668 Score = 141 bits (156), Expect = 9e-29 Identities = 171/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||||||| || ||| ||||||||||||||||||||||| Sbjct 140263 GCCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGA 140204 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || | |||||||||||| || ||||| ||||| || |||| ||| Sbjct 140203 CAGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGG 140144 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCA 41813 | | ||||||||| ||| | || | ||||| | | |||||| | || | Sbjct 140143 GATTCCTTCCTTGTCC-TGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGA 140085 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || || ||||||||||| ||||| ||||||||| Sbjct 140084 CCTCAAGGGTGATGGTCTTTCCGGTCAGCGTCTTGACGAAGATCTGCATG 140035 Score = 138 bits (152), Expect = 1e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||||||| || ||| ||||||||||||||||||||||| Sbjct 140491 GCCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGA 140432 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || | ||||||||||| || ||||| ||||| || |||| ||| Sbjct 140431 CAGGGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGG 140372 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCA 41813 | | ||||||||| ||| | || | ||||| | | |||||| | || | Sbjct 140371 GATTCCTTCCTTGTCC-TGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGA 140313 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||| || || || || || ||||| ||||| ||||| ||||||||| Sbjct 140312 CCTCCAGGGTGATGGTCTTTCCGGTCAGAGTCTTGACGAAGATCTGCATG 140263 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || |||||||| || ||| ||||||||||||||||||||||| Sbjct 140718 CCACCACGCAGACGCAAGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAC 140659 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || | |||||||||||| || || || ||||| || || | ||| Sbjct 140658 AGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGGGGG 140599 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| ||| | || | ||||| | | |||||| | || || Sbjct 140598 ATTCCTTCCTTGTCC-TGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGAC 140540 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || || || ||||| ||||| ||||| ||||||||| Sbjct 140539 CTCAAGGGTGATGGTCTTTCCGGTCAGTGTCTTGACGAAGATCTGCATG 140491 Score = 127 bits (140), Expect = 2e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||||||| || ||| ||||||||||||||||||||||| Sbjct 140035 GCCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGA 139976 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || | |||||||||||| || ||||| ||||| || |||| ||| Sbjct 139975 CAGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGG 139916 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCA 41813 | | ||||||||| ||| | || | ||||| | | |||||| | || | Sbjct 139915 GATTCCTTCCTTGTCC-TGAATCTTGGCCTTCACATTCTCGATTGTGTCGGATGGTTCGA 139857 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| | || || || || || ||||| ||||| || || || ||||| || Sbjct 139856 CCTCAAGGGTGATGGTCTTTCCGGTCAGAGTCTTCACAAAGATTTGCATTTT 139805 >seq98 Length=483913 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | |||| || || || ||||||||||||||| |||||||| Sbjct 465634 CCCCCGCGAAGTCGAAGAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 465575 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || |||||||| |||||||| |||| ||||| || || | ||| Sbjct 465574 AGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGA 465515 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | |||||||||| ||| || ||||| | | ||||| | ||| ||| Sbjct 465514 ATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTCGACC 465455 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| ||| || || || || ||||||||||| ||||| |||||||| Sbjct 465454 TCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 465408 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| |||| || ||||||||| ||||| |||||||| Sbjct 464944 CCTCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 464885 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || |||||||| |||||||| |||| ||||| || || | ||| Sbjct 464884 AGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGA 464825 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | |||||||||| ||| || ||||| | | ||||| | ||| ||| Sbjct 464824 ATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAAGGCTCGACC 464765 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| ||| || || || || ||||||||||| ||||| |||||||| Sbjct 464764 TCCAACGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 464718 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | |||| || || || ||||||||| ||||| |||||||| Sbjct 465172 CCCCCGCGAAGTCGAAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 465113 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || |||||||| |||||||| |||| ||||| || || | ||| Sbjct 465112 AGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGA 465053 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | |||||||||| ||| || ||||| | | ||||| | ||| ||| Sbjct 465052 ATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTCGACC 464993 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| ||| || || || || ||||||||||| ||||| |||||||| Sbjct 464992 TCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 464946 >seq2250 Length=42400 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | ||||||||| || ||| |||||||||||||| |||||||| Sbjct 17064 CCACCGCGGAGTCGCAGCACCAGATGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAC 17005 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || |||||||||||||| || || || ||||| || || | ||| Sbjct 17004 AGGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGA 16945 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | ||||| ||| ||| || |||| | | ||||| | ||| ||| Sbjct 16944 ATTCCTTCCTTATCCTGGATCTTGGCTTTCACATTCTCGATCGTGTCCGATGGCTCGACC 16885 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || | || || || || ||||| || || || ||||||||||||||| Sbjct 16884 TCGAGTGTGATGGTCTTGCCCGTGAGTGTTTTCACGAAAATCTGCATG 16837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462011650508000