Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq6779 102 8e-17 >seq6779 Length=15061 Score = 102 bits (112), Expect = 8e-17 Identities = 166/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || ||||| ||||| || || |||||| || ||| | || ||||| || ||||| Sbjct 2850 ATGTACGTGTCGATCAGCAGCGAGTACATCTCACTGTGCACATTTTCCATCGCAATCTGG 2791 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| || ||||||| | || || ||| | ||| |||||| | ||| Sbjct 2790 AAGCCGTAGAAGCAGCGCGCTTCCGTAACCTGCACCTCCTGGCTGAAGCGTTCCACCAGA 2731 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||||||||| |||||| |||||| || || |||| | || ||||| | Sbjct 2730 TTCTCGTTCACGATACCGTCGGACGCGGCAAAGAAGGCCAGCACGTGGGAGATGAAGTGG 2671 Query 17414 TTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTC 17472 |||| |||| | || ||||||||| | || ||||| | ||| || ||||| Sbjct 2670 CGTTCGCTCGGTTTCAGCGTCTCCCAGTCCTTCATGTCCTTGGACAGATCAACCTCTTC 2612 Score = 89.7 bits (98), Expect = 5e-13 Identities = 270/411 (66%), Gaps = 6/411 (1%) Strand=Plus/Minus Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857 ||| || ||||| || || || || |||| | || |||||||| || | | | || Sbjct 3382 ATCGGCCACAAACTCAATGTACTGCGACATCAGATCACAGTTCATGCCAAGCATATCCAC 3323 Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917 ||| || || | ||||| || ||||| || | ||||| || || || | Sbjct 3322 CGGCAGTGCCTTCGTCAGGAACTCCTGCTCGATCAGGACCGCATCGCGGATGATCTCCGT 3263 Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977 || || |||| ||||| | || |||| || |||||||| || || || ||||| Sbjct 3262 CACGCGCTCCTTCGACGGCTTCTGCACCAGATACTTGAACATCAGGCAGGCAAAGTCGCA 3203 Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037 || | || ||||| | ||| || ||||| || || || | || |||||| || Sbjct 3202 GTGCAGCCCTTCGTCGCGCGAGATCAGCTCGTTCGAGAAGGTGAGTCCCGGCATCAGGCC 3143 Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAA-CGACC-CAGAAAAGAATATACCCTCGACG 17095 || ||||| | ||| || ||||||||||| | ||| | | ||||| |||||||| || Sbjct 3142 ACGCTTCTTCAGCCAGAAGATCGCGGCGAAGCTACCGCTG--AAGAAGATACCCTCAACC 3085 Query 17096 GATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCCATTTCTG 17154 | || || || | | || ||| | | | || | ||| | ||| ||||| ||| | Sbjct 3084 GCAGCGAATGCCACGACCCGCTCGCCAAAGTTGGCCTTCTTGCT-CGAGATCCAGTTCAG 3026 Query 17155 CACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205 | |||| || || || ||| | ||| || |||||| ||||| || || Sbjct 3025 CGCCCAGTCCGCCTTCCTCTTCACGCACGGCAGCGTTTCGATGGCATTGAA 2975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517414732125720