Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq8504 363 2e-95 >seq8504 Length=8995 Score = 363 bits (402), Expect = 2e-95 Identities = 1200/1852 (65%), Gaps = 28/1852 (2%) Strand=Plus/Minus Query 52829 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 52888 || || || ||||| ||||||||||| || ||||| | || | |||| ||||| ||| Sbjct 3097 GCCGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCGTAGAAA 3038 Query 52889 TGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 52948 || || || || ||| ||| | || || || | || || || | ||||| Sbjct 3037 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 2978 Query 52949 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 53008 |||||||| || || || | ||||| |||||||| ||| ||| || | || ||| Sbjct 2977 TGATCGATAAACGCGCCACGATCTGCGGCCATTTTGATGCACGTTTTCACCGAGATCTCC 2918 Query 53009 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTAT--TCTGAATAGAT 53065 || | ||||| || | |||| | | || | | | | ||| | || || ||| Sbjct 2917 CATACCGTTTTGTACAGGTCGCGAATTTCCTGCGGTATAGCCGCTATCTTTTGGATCGAT 2858 Query 53066 CCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAA 53125 ||| | || ||| ||||| || || || ||| | | | ||| ||| Sbjct 2857 CCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAAA 2798 Query 53126 ACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAA 53185 | || ||||| | || || || || || || || |||| || | || | ||||| Sbjct 2797 TCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAA 2738 Query 53186 ATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCA 53245 | || || ||||| || | || ||||| || || | |||||| || || || || Sbjct 2737 ACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCC 2678 Query 53246 GTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTT 53305 |||||||| || |||| || | ||| | || |||| | ||| || || || Sbjct 2677 GTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTC 2618 Query 53306 AGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATA 53365 | |||| ||||| ||||||| |||| | || ||||| Sbjct 2617 AACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAGAATG 2558 Query 53366 CCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 53424 || || || | | | ||| | || || ||||| || || || | || || || Sbjct 2557 CCCTTGCTCACCGGGCTGCCCT-CGTACGTCTCGTACGGACCATCTCGAGCGGCCAGCTC 2499 Query 53425 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTG 53484 ||| ||||| || | ||| ||||| || ||||||||||| || | || |||||| | ||| Sbjct 2498 ACAGCTCGCTTCCAGTGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTG 2439 Query 53485 TGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAAC 53544 || || ||| || | ||||| | || || ||||| || || | || || || Sbjct 2438 AGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCAC 2379 Query 53545 ACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATA 53604 || || ||||| ||||| || | | |||| ||| | ||| || || | ||||| || Sbjct 2378 GCCGATGCCGATCGGTCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTA 2319 Query 53605 ATTAATATCTATAATTTTATTGAGGTTTCT-GACAATTACTTTGACCACATCCTTCAGTT 53663 ||| | ||| || ||||| || || || | | || | ||| | | || |||||||| | Sbjct 2318 ATTGACATCAATGATTTTGTTCAGATTGCGCGTCACTGTCTTAG-CGACTTCCTTCAGCT 2260 Query 53664 TGAGAAAATCAAA----TTGTCCATCTATTACAAACATGTTCAATGCAATAGATGCCAGA 53719 | ||| ||| | ||||| || |||||||||||||||| || || || |||||| Sbjct 2259 TTGCAAAGTCATACGTTTTGTCTTGCT-TTACAAACATGTTCAAGGCGATCGAGGCCAGA 2201 Query 53720 TTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAGATTAC 53777 || || || |||||||||| | || || || | | ||||||||||| || || Sbjct 2200 TTGCATACCGCTACCTCATC--CTTCGACGAGTACTCCACAATCTCAGTGCACAGGTTGG 2143 Query 53778 TACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAA 53837 ||| |||||||| || | ||| || || ||||| || || || |||||||| || | Sbjct 2142 AACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACA 2083 Query 53838 GAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAG 53897 | ||| | || || ||||| | ||| ||||| || ||||| ||| | | | | Sbjct 2082 GCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCTGCG 2023 Query 53898 CCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACT 53957 |||| | | | | ||| | ||||| || |||| || |||| Sbjct 2022 CCTTCACCTGCCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACT 1963 Query 53958 CGTCTCCCCAAACATTGTCCAAT---CCAGGACATTCATCCGGACACATCAACGACCACT 54014 | || ||||| ||||| || || ||||| || | ||| ||||||| |||| Sbjct 1962 CTTCGCCCCAGG---TGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCACA 1906 Query 54015 CTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 54074 | ||| ||| ||| || | ||| || || || || ||||| || || |||| | || Sbjct 1905 TTTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCG-TAAA-ACAT 1848 Query 54075 CTCTGGTTCTATGT--TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 54132 || || | | ||||| || || || || || || |||||||| ||| | | || Sbjct 1847 GTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATAT 1788 Query 54133 ATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTG 54192 ||| ||||||||| || | || |||| | |||| ||||| ||||| || ||||| Sbjct 1787 ATCGCCATGCCACGGCTCAAGATAGATGGCGAATGCTCCGGGCCGCTTGTTGCCACCCTG 1728 Query 54193 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGC 54252 ||| | ||| | || || || || || || | || ||| || | | ||| || || Sbjct 1727 ATCGACGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAAT 1668 Query 54253 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACCTA 54311 || || || |||||||| || |||| | || || ||| | | | | || || | Sbjct 1667 CCCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGGATAC-AGTGCACGTTCAGTCCGA 1609 Query 54312 TCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTA 54371 | || || ||| ||| || |||| || || | || | ||| || ||||||||||| | Sbjct 1608 TGCCACCGGCCGATTTCGAAATTAGAGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAA 1549 Query 54372 TACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCG 54431 | ||||| || |||| | | || || ||| || | ||| |||| || ||| Sbjct 1548 TGCTATCTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGCGTAGCCG 1489 Query 54432 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCT 54491 || ||| | ||| || || ||||| || || | || || || |||||||| |||| Sbjct 1488 CAGCAAACATGGTTGGCGAGGCGTGGGTGAAGTAACGCTCGGACAGCAGATTGTAGGTCT 1429 Query 54492 CGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCT 54551 |||| |||| || || ||| ||| || || | || || ||||| | |||||||| Sbjct 1428 CGATCGCTGCATCGATGTCCTCGCCATGGATGCCAATGGCAACGCGCATCAGCATGTGCT 1369 Query 54552 GAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAA 54611 | || | || ||||| || || || ||||||||||| ||| |||||| ||||||| Sbjct 1368 GGGGGCGCTCGACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAA 1309 Query 54612 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAG 54663 | || ||||||||||| ||||| || ||||||||||| | ||||| || Sbjct 1308 AGCCGAAATAGTTGTACCCGAAGTCGCGATCGTAAATAATGGCCGAGTTCAG 1257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593571470071920