Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq16614 102 9e-17 seq12380 100 3e-16 seq7351 100 3e-16 seq12187 96.9 4e-15 seq11696 96.9 4e-15 seq1382 96.9 4e-15 seq12843 95.1 1e-14 seq10964 95.1 1e-14 seq9422 95.1 1e-14 seq7842 95.1 1e-14 seq3788 95.1 1e-14 seq3068 95.1 1e-14 seq1115 91.5 2e-13 >seq16614 Length=9217 Score = 102 bits (112), Expect = 9e-17 Identities = 87/104 (84%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 60039 AACAAATT-AACG-TTTATGAAAAAT---TTTCTCCTCGGCAGGGAATCGAACCCTGGTC 60093 |||||||| ||| |||| | |||| ||||||| || | ||||||||||||| |||| Sbjct 348 AACAAATTGAACAATTTAAAACAAATAACTTTCTCCCCGACGGGGAATCGAACCCCGGTC 289 Query 60094 TCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 60137 ||||||||||||||||| ||||| |||||||||||| |||||| Sbjct 288 TCCCGCGTGACAGGCGGGGATACTGACCACTATACTATCGAGGA 245 Score = 98.7 bits (108), Expect = 1e-15 Identities = 72/83 (87%), Gaps = 3/83 (4%) Strand=Plus/Plus Query 60059 AAATTTTCTCCTC---GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 |||| |||||||| | | ||||||||||||| ||||||||||||||||||||| ||| Sbjct 8923 AAATATTCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 8982 Query 60116 CTCACCACTATACTACCGAGGAT 60138 || |||||||||||| ||||||| Sbjct 8983 CTGACCACTATACTATCGAGGAT 9005 >seq12380 Length=7422 Score = 100 bits (110), Expect = 3e-16 Identities = 70/80 (88%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 60059 AAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 60118 |||| | |||| || | ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 1770 AAATATCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTG 1711 Query 60119 ACCACTATACTACCGAGGAT 60138 |||||||||||| ||||||| Sbjct 1710 ACCACTATACTATCGAGGAT 1691 >seq7351 Length=8765 Score = 100 bits (110), Expect = 3e-16 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 60057 AAAAAT-TTTCTCCTC---GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112 |||||| ||||||||| | | ||||||||||||| ||||||||||||||||||||| Sbjct 402 AAAAATATTTCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 343 Query 60113 ATACTCACCACTATACTACCGAGGAT 60138 ||||| |||||||||||| ||||||| Sbjct 342 ATACTGACCACTATACTATCGAGGAT 317 Score = 96.9 bits (106), Expect = 4e-15 Identities = 72/84 (86%), Gaps = 3/84 (4%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTC---GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 |||| ||||||||| | | ||||||||||||| ||||||||||||||||||||| | Sbjct 92 AAAACATTTCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 151 Query 60114 TACTCACCACTATACTACCGAGGA 60137 |||| |||||||||||| |||||| Sbjct 152 TACTGACCACTATACTATCGAGGA 175 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 842 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 783 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 782 TACTATCGAGGA 771 >seq12187 Length=4761 Score = 96.9 bits (106), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 || ||||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||| Sbjct 3267 TTCTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 3208 Query 60122 ACTATACTACCGAGGA 60137 ||||||||| |||||| Sbjct 3207 ACTATACTATCGAGGA 3192 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 4201 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 4142 Query 60126 TACTACCGAGGAT 60138 ||||| ||||||| Sbjct 4141 TACTATCGAGGAT 4129 Score = 95.1 bits (104), Expect = 1e-14 Identities = 68/77 (88%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 2352 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 2293 Query 60126 TACTACCGAGG-ATTGA 60141 ||||| ||||| ||||| Sbjct 2292 TACTATCGAGGAATTGA 2276 >seq11696 Length=4992 Score = 96.9 bits (106), Expect = 4e-15 Identities = 72/84 (86%), Gaps = 3/84 (4%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTC---GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 |||| ||||||||| | | ||||||||||||| ||||||||||||||||||||| | Sbjct 4809 AAAACATTTCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 4868 Query 60114 TACTCACCACTATACTACCGAGGA 60137 |||| |||||||||||| |||||| Sbjct 4869 TACTGACCACTATACTATCGAGGA 4892 >seq1382 Length=28016 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 17494 TCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 17435 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 17434 ATACTATCGAGGA 17422 >seq12843 Length=5650 Score = 95.1 bits (104), Expect = 1e-14 Identities = 69/79 (87%), Gaps = 2/79 (3%) Strand=Plus/Minus Query 60061 ATTTTC--TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 60118 |||||| ||| || | ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 4958 ATTTTCCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTG 4899 Query 60119 ACCACTATACTACCGAGGA 60137 |||||||||||| |||||| Sbjct 4898 ACCACTATACTATCGAGGA 4880 >seq10964 Length=5502 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 5 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 64 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 65 TACTATCGAGGA 76 >seq9422 Length=6755 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1689 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1748 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 1749 TACTATCGAGGA 1760 >seq7842 Length=9580 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 8943 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 9002 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 9003 TACTATCGAGGA 9014 >seq3788 Length=14504 Score = 95.1 bits (104), Expect = 1e-14 Identities = 69/79 (87%), Gaps = 2/79 (3%) Strand=Plus/Minus Query 60061 ATTTTC--TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 60118 |||||| ||| || | ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 300 ATTTTCCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTG 241 Query 60119 ACCACTATACTACCGAGGA 60137 |||||||||||| |||||| Sbjct 240 ACCACTATACTATCGAGGA 222 >seq3068 Length=16410 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 || |||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||| Sbjct 342 TTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 283 Query 60123 CTATACTACCGAGGA 60137 |||||||| |||||| Sbjct 282 CTATACTATCGAGGA 268 >seq1115 Length=29990 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/84 (85%), Gaps = 3/84 (4%) Strand=Plus/Minus Query 60057 AAAAATTTTCTC---CTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 |||||| | ||| | || | ||||||||||||| ||||||||||||||||||||| | Sbjct 15858 AAAAATATCCTCTCCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 15799 Query 60114 TACTCACCACTATACTACCGAGGA 60137 |||| |||||||||||| |||||| Sbjct 15798 TACTGACCACTATACTATCGAGGA 15775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571673008772120