Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17]
20,229 sequences; 224,162,116 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq2589 87.8 4e-12
>seq2589
Length=18080
Score = 87.8 bits (96), Expect = 4e-12
Identities = 221/331 (67%), Gaps = 4/331 (1%)
Strand=Plus/Minus
Query 35396 GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACC 35455
|| |||||||| || ||||| || || || |||||||| |||||||| || | ||
Sbjct 9126 GGGGATTTGGGTCCGGTATATGGGTTTCAGTGGCGTCACTTTGGTGCCACGTACAAAACA 9067
Query 35456 TGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTG 35515
|| ||||||||| || |||| || ||||| |||| | | | | | |
Sbjct 9066 TGCCACGACGATTATACAGGTCAGGGAATAGATCAGCTGGCTGAAGTGATCGACAAAATT 9007
Query 35516 AGAGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCA 35574
| |||| ||||| | ||| | | || || ||| || ||||||||| ||| |||
Sbjct 9006 A-AGAACAATCCCTACGATCGTCGAATCATCATGTGCGCTTGGAATCCTTCTGATATTCC 8948
Query 35575 CCTTATGGCTCTTCCTCCATGCCACATGACTG-CTCAATTTTATGTGGCTAATGGAGAAT 35633
||||| | || ||||||||| || || | || |||| || | |||||||
Sbjct 8947 TAACATGGCCTTACCACCATGCCAC-TGCTTGGCACAGTTTTTCGTTAGTGATGGAGAGC 8889
Query 35634 TGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTG 35693
||||||| ||| ||||||| || | || || || ||||||||||||| || ||||
Sbjct 8888 TGTCGTGTCAGATGTATCAACGTTCGGCCGACGTAGGTCTGGGCGTGCCCTTTAACATTG 8829
Query 35694 CATCATACTCTCTTCTGACTCATCTGATGGC 35724
| ||||| | ||||| || |||| ||
Sbjct 8828 CCAGCTACTCCTTGCTGACCCACATGATCGC 8798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989327515598695
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |