Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq8504 372 4e-98 >seq8504 Length=8995 Score = 372 bits (412), Expect = 4e-98 Identities = 1201/1851 (65%), Gaps = 26/1851 (1%) Strand=Plus/Minus Query 64860 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 64919 || || || ||||| ||||||||||| || ||||| | || | |||| ||||| ||| Sbjct 3097 GCCGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCGTAGAAA 3038 Query 64920 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 64979 || || ||| || ||| ||| | || || || | || || || | ||||| Sbjct 3037 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 2978 Query 64980 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 65039 |||||||| || || || | ||||| |||||||| ||| ||| || | || ||| Sbjct 2977 TGATCGATAAACGCGCCACGATCTGCGGCCATTTTGATGCACGTTTTCACCGAGATCTCC 2918 Query 65040 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTAT--TCTGAATGGAT 65096 || | ||||| || | |||| | | || | | | | ||| | || || ||| Sbjct 2917 CATACCGTTTTGTACAGGTCGCGAATTTCCTGCGGTATAGCCGCTATCTTTTGGATCGAT 2858 Query 65097 CCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAA 65156 ||| | | || ||| ||||| || || || ||| | | | ||| ||| Sbjct 2857 CCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAAA 2798 Query 65157 ACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAA 65216 | || ||||| | || || || || || || || |||| || | || | ||||| Sbjct 2797 TCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAA 2738 Query 65217 ATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCA 65276 | || || ||||| || | || ||||| || || | |||||| || || || || Sbjct 2737 ACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCC 2678 Query 65277 GTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTT 65336 |||||||| || |||| || | ||| | || |||| | ||| || || || Sbjct 2677 GTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTC 2618 Query 65337 AGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATA 65396 | |||| ||||| ||||||| |||| | || ||||| Sbjct 2617 AACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAGAATG 2558 Query 65397 CCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 65455 || || || | | | ||| | || || ||||| || || || | || || || Sbjct 2557 CCCTTGCTCACCGGGCTGCCCT-CGTACGTCTCGTACGGACCATCTCGAGCGGCCAGCTC 2499 Query 65456 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTG 65515 ||| ||||| || | ||| ||||| || ||||||||||| || | || |||||| | ||| Sbjct 2498 ACAGCTCGCTTCCAGTGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTG 2439 Query 65516 TGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAAC 65575 || || ||| || | ||||| | || || ||||| || || | || || || Sbjct 2438 AGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCAC 2379 Query 65576 ACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATA 65635 || || ||||| ||||| || | | |||| ||| | ||| || || | ||||| || Sbjct 2378 GCCGATGCCGATCGGTCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTA 2319 Query 65636 ATTAATATCTATAATTTTATTGAGATTTCT-GACAATTACTTTGACCACATCCTTCAGTT 65694 ||| | ||| || ||||| || ||||| | | || | ||| | | || |||||||| | Sbjct 2318 ATTGACATCAATGATTTTGTTCAGATTGCGCGTCACTGTCTTAG-CGACTTCCTTCAGCT 2260 Query 65695 TGAGAAAATCAAATCGCTCATCTA---TTACAAACATGTTCAATGCAACAGATGCCAGAT 65751 | ||| ||| | | ||| |||||||||||||||| || | || ||||||| Sbjct 2259 TTGCAAAGTCATACGTTTTGTCTTGCTTTACAAACATGTTCAAGGCGATCGAGGCCAGAT 2200 Query 65752 TACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAGATTACT 65809 | || || |||||||||| | || || || | | ||||||||||| || || Sbjct 2199 TGCATACCGCTACCTCATC--CTTCGACGAGTACTCCACAATCTCAGTGCACAGGTTGGA 2142 Query 65810 ACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAG 65869 ||| |||||||| || | ||| || || ||||| || || || |||||||| || || Sbjct 2141 ACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAG 2082 Query 65870 AATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGC 65929 ||| | || || ||||| | ||| ||||| || ||||| ||| | | | || Sbjct 2081 CATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCTGCGC 2022 Query 65930 CTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 65989 ||| | | | | ||| | ||||| || |||| |||||||| Sbjct 2021 CTTCACCTGCCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTC 1962 Query 65990 GTCTCCCCAAACATTGTCCAAT---CCAGGACATTCATCCGGACACATCAACGACCACTC 66046 || ||||| ||||| || || ||||| || | ||| ||||||| |||| Sbjct 1961 TTCGCCCCAGG---TGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCACAT 1905 Query 66047 TCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATC 66106 | ||| ||| ||| || | ||| || || || || ||||| || || |||| | || Sbjct 1904 TTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCG-TAAA-ACATG 1847 Query 66107 TCTGGTTCTATGT--TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 66164 || || | | ||||| || || || || || || |||||||| ||| | | ||| Sbjct 1846 TCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATA 1787 Query 66165 TCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGA 66224 || ||||||||| || | || ||||| | |||| ||||| ||||| || |||||| Sbjct 1786 TCGCCATGCCACGGCTCAAGATAGATGGCGAATGCTCCGGGCCGCTTGTTGCCACCCTGA 1727 Query 66225 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTA 66284 || | ||| | || || || || || || | || ||| || | | ||| || || | Sbjct 1726 TCGACGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATC 1667 Query 66285 CCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT-AGACCTAT 66343 || || || |||||||| || |||| | || || ||| | | | | || || || Sbjct 1666 CCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGGATAC-AGTGCACGTTCAGTCCGAT 1608 Query 66344 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTAT 66403 || || ||| ||| || |||| || || | || | ||| || ||||||||||| || Sbjct 1607 GCCACCGGCCGATTTCGAAATTAGAGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAAT 1548 Query 66404 ACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGC 66463 ||||| || |||| | | || || ||| || | ||| |||| || |||| Sbjct 1547 GCTATCTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGCGTAGCCGC 1488 Query 66464 ATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTC 66523 | ||| | ||| || || ||||| || || | || || || |||||||| ||||| Sbjct 1487 AGCAAACATGGTTGGCGAGGCGTGGGTGAAGTAACGCTCGGACAGCAGATTGTAGGTCTC 1428 Query 66524 AATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTG 66583 || |||| || || ||| ||| || || | || || ||||| | ||||||||| Sbjct 1427 GATCGCTGCATCGATGTCCTCGCCATGGATGCCAATGGCAACGCGCATCAGCATGTGCTG 1368 Query 66584 AGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAA 66643 || | || ||||| || || || |||| |||||| ||| |||||| |||||||| Sbjct 1367 GGGGCGCTCGACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAAA 1308 Query 66644 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 66694 || ||||||||||| ||||| || ||||||||||| ||||||| || Sbjct 1307 GCCGAAATAGTTGTACCCGAAGTCGCGATCGTAAATAATGGCCGAGTTCAG 1257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658006372780360