Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq8504 356 3e-93 seq6779 95.1 2e-14 >seq8504 Length=8995 Score = 356 bits (394), Expect = 3e-93 Identities = 1221/1889 (65%), Gaps = 40/1889 (2%) Strand=Plus/Minus Query 70791 CTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCC 70850 |||||||| |||||||| || | | || | || ||||| |||||||||||||| Sbjct 3128 CTTGTCCACCGTAAACTGGATTGCATTCACGGCCGGCTTGGTACGCAGATAGTACATGCC 3069 Query 70851 TGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGG 70910 ||||| | || | |||| ||||| ||||| || ||| || ||| |||| | || Sbjct 3068 AGTTTTCAACCCCATCTTCCAGCCGTAGAAATGGATCGACGTCAGCTTGCCATAGTTTGG 3009 Query 70911 ATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 70970 || || | |||||| || | ||| || |||||||| || || || | ||||| || Sbjct 3008 CTCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCGCCACGATCTGCGGC 2949 Query 70971 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATAT 71029 |||||| ||| ||| || | || ||||| | ||||| || | |||| | | Sbjct 2948 CATTTTGATGCACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGGTCGCGAATTTC 2889 Query 71030 CTTCTGGAAGGTTTGTAT--TCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGAT 71087 || | | | | ||| | || || |||||| | | | ||| || || || Sbjct 2888 CTGCGGTATAGCCGCTATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGTTCTTCAT 2829 Query 71088 CTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTG 71147 || || ||| | | | ||| ||| | || |||||| | || || || || Sbjct 2828 GTCGAGATCCCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCACCTG 2769 Query 71148 AAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTC 71207 || || || |||| || | | | |||||| || || ||||| || | || || Sbjct 2768 GAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGATTC 2709 Query 71208 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATT 71267 ||| || || | |||||| || || || || |||||||| || |||| || || ||| Sbjct 2708 ATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAATT 2649 Query 71268 TCTAAGACCATGTGATCGG--ATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGAT 71325 | || || ||| | || || || || || | |||| ||||| ||||||| Sbjct 2648 GCGAATGCC--GTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGATCCGTC 2591 Query 71326 GGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACT-AGCGTATGATCCTGCATA 71384 ||| | ||||| || || | || ||| | || Sbjct 2590 GGTTCCTTGTTCCACATCTCGTACTGCAGAATGCCCTTGCTCACCGGGCTGCCCT-CGTA 2532 Query 71385 TGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATA 71444 || ||||| || || ||| |||| || ||||| ||||| || | ||| || || || Sbjct 2531 CGTCTCGTACGGACCATCTCGAGCGGCCAGCTCACAGCTCGCTTCCAGTGCGCCGTAGTA 2472 Query 71445 AATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATT 71504 ||||||||||| || | || ||| || | ||| || || ||| || | ||||| Sbjct 2471 GATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGGATAGCG 2412 Query 71505 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTT 71564 | || || ||||| || || | || || ||||| || ||||| |||||||| | | | Sbjct 2411 CATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATGCCGATCGGTCTGTGGCGCAT 2352 Query 71565 ATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 71624 ||| || | ||| || || | ||||| ||||| | ||| || ||||| || ||||| Sbjct 2351 ATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTGTTCAGATT 2292 Query 71625 TC---TGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATCTA- 71680 | | ||| | ||| | | || ||||| || || ||| ||| | | ||| Sbjct 2291 GCGCGTCACTGT--CTTAG-CGACTTCCTTCAGCTTTGCAAAGTCATACGTTTTGTCTTG 2235 Query 71681 --TTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATC 71738 ||||||||| ||||||||| | || |||||||| || || |||||||||| | || Sbjct 2234 CTTTACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCGCTACCTCATC--CTTC 2177 Query 71739 GGCA--TATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 71796 | | || | | ||| |||||||| || || ||| |||||||| || | ||| || Sbjct 2176 GACGAGTACTCCACAATCTCAGTGCACAGGTTGGAACATTTGATGGTGCCGATATTCTGC 2117 Query 71797 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATC 71856 || ||||| || || || |||||||| || || || |||| || ||||| | | Sbjct 2116 TGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCCGGTTTCCACC 2057 Query 71857 TGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTT 71916 || ||||| || ||||| ||| | | | ||||| | | | | | Sbjct 2056 TGCGATTCGATGATCGCAAACCACAGATCCTGCGCCTTCACCTGCCGCATAAAGCGACCC 1997 Query 71917 TCTCTTTCGTATT--GTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAAT- 71973 ||| | ||||| ||||| | || |||||||| || ||||| | |||| || Sbjct 1996 TCTTTCTCGTACCCCGTGTACAGCTTC--TCGAACTCTTCGCCCCAGG---TGTCCGATA 1942 Query 71974 --CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCA 72031 || ||||| || | ||| ||||||| |||| | | | | | || || | || Sbjct 1941 GCCCGGGACAATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGCCTCCACACGCTGCA 1882 Query 72032 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG--CTCCTCGTT 72089 | || || || || ||||| || || |||| | || || || | | |||||| || Sbjct 1881 TGAACAGGTCCGGTATCCAGAGTGCG-TAAA-ACATGTCCCGTGCGCGGACCTCCTCCTT 1824 Query 72090 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 72149 || || || || || |||||||| ||| | | ||||| ||||||||| || | || Sbjct 1823 GCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCGCCATGCCACGGCTCAAGATA 1764 Query 72150 TATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 72209 ||||| | |||| ||||| ||||| || |||||||| | ||| | || || || || Sbjct 1763 GATGGCGAATGCTCCGGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCGTATTGTT 1704 Query 72210 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 72269 || || | || ||| || | | ||| || || || || || |||||||| || | Sbjct 1703 GTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACCGGAGATGTACGT 1644 Query 72270 TCCACTGGCACGAATAT--TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 72327 ||| | || || ||| ||| || | | || || || || ||| ||| || ||| Sbjct 1643 TCCCTTCGCGCGGATACAGTGCACGTTCA--GTCCGATGCCACCGGCCGATTTCGAAATT 1586 Query 72328 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 72387 | || || | || | ||| || ||||||||||| || ||||| || |||| | | Sbjct 1585 AGAGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACATGGTCAAC 1526 Query 72388 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 72447 || || ||| || | ||| |||| || ||||| ||| | ||| || || ||| Sbjct 1525 AGGAAGCAGGACGAAAGCTGGGGACGCTGCGTAGCCGCAGCAAACATGGTTGGCGAGGCG 1466 Query 72448 TGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCAT 72507 || || || | || ||||| |||||||| ||||| || |||| || || ||| Sbjct 1465 TGGGTGAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGATCGCTGCATCGATGTCCTCG 1406 Query 72508 TGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTA 72567 ||| || || | || || ||||| | ||| ||||| || | || ||||| || Sbjct 1405 CCATGGATGCCAATGGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGATTTTTCCC 1346 Query 72568 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 72627 || || |||| |||||| ||| |||||| |||||||| || ||||||||||| ||| Sbjct 1345 TTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATAGTTGTACCCGAAG 1286 Query 72628 TCTCGTTCGTAAATAATAACCGAATTGAG 72656 || || ||||||||||| |||| || || Sbjct 1285 TCGCGATCGTAAATAATGGCCGAGTTCAG 1257 >seq6779 Length=15061 Score = 95.1 bits (104), Expect = 2e-14 Identities = 178/259 (69%), Gaps = 7/259 (3%) Strand=Plus/Minus Query 42053 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTG 42112 || ||||||| || || || ||||||||||| || || || | || | ||||| Sbjct 3228 TTGAACATCAGGCAGGCAAAGTCGCAGTGCAGCCCTTCGTCGCGCGAGATCAGCTCGTTC 3169 Query 42113 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT 42172 || || |||||||| ||||| ||||||||||| || ||||| || || | || || Sbjct 3168 GAGAAGGTGAGTCCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGCGGCGAAGCTA 3109 Query 42173 CCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA 42232 || |||||||| || || || || || || || | | | ||| ||| | ||| Sbjct 3108 CCGCTGAAGAAGATACCCTCAACCGCAGCGAATGCCACGACCCGCTCGCCAAAGTTGGC- 3050 Query 42233 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 42287 || || || ||||| || | ||||| || |||||| | || || || |||| || Sbjct 3049 CT-TCTTGCTCGAGATCCAGTTCAGCGCCCAGTCCGCCTTCCTCTTCACGCACGGCAGCG 2991 Query 42288 TTTCTATGGCATTAAAGAG 42306 |||| |||||||| || || Sbjct 2990 TTTCGATGGCATTGAACAG 2972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670969494064040