Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq3725 118 9e-22 >seq3725 Length=17844 Score = 118 bits (130), Expect = 9e-22 Identities = 134/178 (75%), Gaps = 4/178 (2%) Strand=Plus/Plus Query 5321 TCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAG 5380 ||||| || | ||| || || | || || |||||||| ||||||| ||| ||||| Sbjct 16795 TCGCAAATAAACTGTGCGATGCGATCACCTTTCTTAACTTCAAAGTT--TGTCTCCGAGT 16852 Query 5381 --TTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCA 5438 || ||||| || || ||||| || || |||||||||||||||| || || ||||||| Sbjct 16853 GATTGAACAGTACAACTCCGACGTTACCCCGGTAGTCTTCGTCGACGACACCGGCGCCCA 16912 Query 5439 CGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGCAACC 5496 | ||||| |||| ||| || || | ||||||||||| || | || || |||||||| Sbjct 16913 CATCGATGAAGTTTTTCACGGCCAAACCGGAACGTGGAGCCACTCGGCCATAGCAACC 16970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447637180714480