Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq12085 96.9 4e-15 >seq12085 Length=6219 Score = 96.9 bits (106), Expect = 4e-15 Identities = 191/276 (69%), Gaps = 10/276 (4%) Strand=Plus/Minus Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452 ||||| |||||| | |||||| | ||||| | ||||| |||||| | || || Sbjct 3056 ATTGGGATTTTGGAAGAATGGGCATTGGTGGGTTGGATCGTGAATTTAATGCGATATTTC 2997 Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATC-GAAATAATaaaaaaaTTAGGCTGTAAA 164511 |||| || |||||||| | | |||| | | || | | || || | || |||||| Sbjct 2996 GACGTGCTTTTGCTTCGCG-TGTTTTCCCACCAGAGGTGGTTGAACAACTGGGATGTAAA 2938 Query 164512 CATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGA 164571 || |||| || ||| | || |||||||||||||| || |||||| | ||||| ||| Sbjct 2937 CACGTAAAGGGCATTCTTCTATATGGACCTCCTGGTACTGGCAAAACACTTATGGCACGA 2878 Query 164572 TGCATT-GCTCAAGCTTTTAAA---TCGCGACCCGTTAAAATTGTTAATGGTCCTGAATT 164627 ||| | ||| | ||||| ||| || || || || || |||||||| | | Sbjct 2877 CAAATTGGAACAA--TGTTAAATGCTCGAGAACC--AAAGATAGTAAATGGTCCGCAGAT 2822 Query 164628 ATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGT 164663 || | |||||||| ||||| |||||||||||||| Sbjct 2821 TTTAGATAAATATGTCGGTGAATCAGAAGCTAATGT 2786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595721326316400