Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq11473 185 1e-42 seq9757 152 8e-33 >seq11473 Length=5045 Score = 185 bits (204), Expect = 1e-42 Identities = 201/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| || || ||||||||||| || ||||||||||| || ||| Sbjct 1358 GCCAAGCGTCATCGCAAGGTGCTGCGCGATAACATCCAGGGCATCACCAAGCCCGCCATC 1299 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||||||||| ||||| || || |||||| |||| || || |||| || |||| Sbjct 1298 CGCCGTCTGGCTCGCCGTGGCGGGGTGAAGCGTATCTCCGGTCTGATCTACGAGGAGACG 1239 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | ||| ||||| | ||||| ||| ||| |||| ||||| || ||| |||||| Sbjct 1238 CGCGGTGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGATGCGGTCACCTACACCGAG 1179 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| ||||| | |||||| | || || || |||| || || ||| Sbjct 1178 CACGCCAAGCGCAAGACGGTCACGGCGATGGATGTGGTGTACGCTCTGAAGCGCCAGGGC 1119 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | | || || || ||| ||||| Sbjct 1118 CGTACGCTCTACGGATTCGGAGGTTAA 1092 >seq9757 Length=26029 Score = 152 bits (168), Expect = 8e-33 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| |||||| ||||||||||| || ||||||||||| || ||| Sbjct 15440 GCGAAGCGTCATCGCAAGGTTCTTCGTGATAACATCCAGGGCATCACCAAGCCGGCCATC 15381 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||||||||| ||||| ||||| |||||| | || || || |||| || |||| Sbjct 15380 CGCCGTCTGGCTCGCCGTGGCGGAGTGAAGCGTATTTCCGGCCTGATCTACGAGGAGACG 15321 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || ||||| | ||||| ||| ||| |||| |||||| | || |||||| Sbjct 15320 CGTGGCGTACTGAAGGTGTTCCTGGAGAACGTGATCCGTGATGCCGTGACGTACACCGAG 15261 Query 16613 CACGCTAAACGTAAGAC 16629 ||||| || || ||||| Sbjct 15260 CACGCCAAGCGCAAGAC 15244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79056704483697