Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq4818 183 3e-41 seq8504 122 8e-23 >seq4818 Length=14046 Score = 183 bits (202), Expect = 3e-41 Identities = 225/305 (74%), Gaps = 2/305 (1%) Strand=Plus/Minus Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729 |||||||||| || || ||||| | || |||| ||| | || ||||| || || | Sbjct 10253 AAACGCATGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGAAGGAGGGCAAGATGC 10194 Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789 |||| | ||| ||||||||||||||||||||||| || |||||||| |||| |||||| Sbjct 10193 ACGGCTTCCTGCGCATGTACTGGGCCAAAAAGATCCTGGAGTGGACGAAAACGCCCGAGG 10134 Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849 | ||||| ||| | || ||||| |||||| | |||||||| || || |||||||| | Sbjct 10133 AAGCGCTTGAGACGGCGATCTATCTGAACGATCGCTACAGTCTGGATGGGCGCGATCCGA 10074 Query 71850 ACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTC-TTCACGATAGAAGCTTTTTAGAA 71908 |||| || ||||||||||||||| | | |||| | | |||||| ||| || Sbjct 10073 ACGGGTACGTCGGTTGCATGTGG-TCGATCGCGGGCATCCACGATCAGGGCTGGAAGGAG 10015 Query 71909 CGTCAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAAT 71968 || || | ||||| |||||||| || ||||| | | || ||| | || || ||||| Sbjct 10014 CGCGAAATCTTTGGCAAAATTCGGTACATGAACTATGACGGATGCAAGCGTAAATTCAAC 9955 Query 71969 GTGAA 71973 ||||| Sbjct 9954 GTGAA 9950 >seq8504 Length=8995 Score = 122 bits (134), Expect = 8e-23 Identities = 335/504 (66%), Gaps = 11/504 (2%) Strand=Plus/Minus Query 147447 AGATGCTGATTGACCACTTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTA 147506 ||||| || || ||||| || ||||||||||||| || | | ||| | || Sbjct 2788 AGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGAC 2729 Query 147507 GTAAACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATG 147566 || ||||||||||||| || ||||| || ||||| ||||| || | ||||||||||| Sbjct 2728 GTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATC 2669 Query 147567 TAAGCAATCAATAATGAATTGCGTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCC 147626 || | || | |||||||| | ||||||| | || || | | ||| | |||| || Sbjct 2668 GGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCC 2609 Query 147627 CAGTTCCAAAGATCATTCGATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAA 147686 |||||||| ||||| ||| || | | ||||||| || |||| | || || Sbjct 2608 CAGTTCCACAGATCCGTCGGTTCCT---TGTTCCACATCTCGTACTGCAGAATGCCCTTG 2552 Query 147687 CTTGCAGGGCTTCCATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTT 147746 || | ||||| || ||||| | ||||| | || | | || || || | | | Sbjct 2551 CTCACCGGGCTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAGCTC-ACAGCT 2493 Query 147747 TGACTT--AGTGCACCATAATAAATAGTTTCTGAAATCTTTTTATTTAAATCTCTAGCCT 147804 | ||| ||||| || || || || ||||| | || | | ||||| | | ||||| Sbjct 2492 CG-CTTCCAGTGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCT 2434 Query 147805 CTTGGCTGTCGTAGGGCATATC-CAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCG 147863 ||| ||| ||||| || ||| | || | | ||||| ||| || | || || | ||| Sbjct 2433 CTTCGCTTTCGTACGG-ATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCG 2375 Query 147864 ATACCGATGGGTCGGTGTCTGAAATTCGA-TGCTTGAGCGCTAGCCAACGGATAAAAATT 147922 || ||||| |||| ||| | | ||| || |||| ||| | || ||||| |||| Sbjct 2374 ATGCCGATCGGTCTGTGGCGCATATTGGAGCGCTT-AGCCTCCGGCACGGGATAGTAATT 2316 Query 147923 CAAGTCGATAATTTTATTGAGATT 147946 | || || ||||| || ||||| Sbjct 2315 GACATCAATGATTTTGTTCAGATT 2292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478541364228880