Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_007805.1 Length=39199 Score E Sequences producing significant alignments: (Bits) Value seq19408 95.1 3e-15 seq14771 84.2 5e-12 >seq19408 Length=1197 Score = 95.1 bits (104), Expect = 3e-15 Identities = 447/695 (64%), Gaps = 75/695 (11%) Strand=Plus/Plus Query 38385 AGCAGCAGCTCGCCGACCTGACTGAGCTTGAGCAGCGGCAGATTCCTTACGCGACAGCCA 38444 ||||| || ||| |||| || || || |||| ||||| |||| | ||| || || | Sbjct 458 AGCAGGCCCTGGCCAACCTCACCGATCTGGAGCGCCGGCAACTTCCGTTCGCCACTGC-A 516 Query 38445 CTG-CGCTTACGCGGGCCGCGCAAGGCCTGATGGATC--GAT-TGCGCGACGAGATGCGT 38500 ||| | || || || | || |||| || ||| || || | || | ||||||| | Sbjct 517 CTGGCACTGACTCGTACGGCCCAAG---TGGTGGCTCAGGACATCCGGGCCGAGATGTCT 573 Query 38501 GTCGTGTTCGACCGCCCGACCCCGTACACCCTGAACAGCCTGCGCATGGTGCCAGCCAGG 38560 | |||||||||||| || || ||| |||||| || ||| || ||| | ||| || | Sbjct 574 GCCGTGTTCGACCGGCCCACACCGGCCACCCTCAATAGCTTGTTCATCGAGCCGGCGACC 633 Query 38561 AAAGACCGGCTCGAAGCGCGGGTTTGGTTCAAGGACG-----------------AAG--- 38600 || | ||| ||||||||||| ||| ||||||||| ||| Sbjct 634 AAGCAGAAGCTGGAAGCGCGGGTGTGGATCAAGGACGGCAGGACTCGCAACGGCAAGGGC 693 Query 38601 --------CGG------------ACGGGGC----GCA-GCCTGCATCGGTGTGGATTGCC 38635 ||| | ||||| ||| | |||| || | |||| | | Sbjct 694 AACCTTGTCGGGCGCGAGGGGGTATGGGGCAAGGGCAGGGCTGCCTCAGCGTGGTTGACG 753 Query 38636 CCCGAGGTCTACGGTGGGCCGCGTCGGAACAAGCCGGC--CGAGCTTCA-GCTCAGGGCC 38692 |||||| ||| ||| |||||| | | ||||| ||| ||| || || ||||||| | Sbjct 754 CCCGAGATCTTCGGCGGGCCGAGAAGCCACAAG--GGCATCGA-CTCCATGCTCAGGCGC 810 Query 38693 AAGGGGATCCTGCCCGAAGGTAAGTACGTGGTGCCTGGCGCCGGTGCTGATCTTGATCGC 38752 ||||| ||||| | | || ||||||||||||| || | ||| | || || | Sbjct 811 AAGGGCATCCTTTCGCAGGGGCAGTACGTGGTGCCCGGTCGTGATGCCCAACTCGACCAG 870 Query 38753 TACGGGAACATCAGGCGGGGTCAAGTGACCAGAGCGCTGAGCGGCATCCGCGGATTCACT 38812 ||||| ||||| ||| |||| | | | || | || ||| || | | ||| Sbjct 871 TACGGCAACATGCCGCGAGGTCTGCTTTCGA-AGATCAGATCGGGCGCCTC-CCTCAACT 928 Query 38813 C--AGGCCGGGTACAACGCGAACGCGACCGATAGCAGACGGAGCAGGGCGAAGGGTAATG 38870 | ||| || ||||| || ||||| || | |||| || || | || ||||| || | Sbjct 929 CTGAGGAGGGCTACAAGGCCAACGCCACGGGCAGCAAGCGCAGTCGTGCCAAGGGCAACG 988 Query 38871 CTCGCCGCTACTTCGTCATG-AC--CCGCAAGGGCCAGCCCATTGGCATTGCTGAGCGCA 38927 ||||||||||||||| || | |||| || ||||| | | | || ||||||| Sbjct 989 GCAAGCGCTACTTCGTCATGCACGACGCCAAGCGCAAGCCCTTCGCGGTGGCCGAGCGCA 1048 Query 38928 CAGGCCGAGGCCGGGATGCCGTCTCGATCATCATGGCCTTCGT-GTC---ACGCCCTTCG 38983 ||||| ||| ||| || | || | | | ||||||||||| | | |||||| | Sbjct 1049 CAGGCAAGGGCAGGGCTGGCCTCAAGCTGGTGATGGCCTTCGTCGGCAAGACGCCC-ACC 1107 Query 38984 TATCGC--CGCCGGCTGAGCTTCTTCGAGATCGCG 39016 || ||| ||| ||||||||||||||||||||| Sbjct 1108 TACCGCAAGGCC--CTGAGCTTCTTCGAGATCGCG 1140 >seq14771 Length=3193 Score = 84.2 bits (92), Expect = 5e-12 Identities = 124/174 (71%), Gaps = 5/174 (3%) Strand=Plus/Plus Query 9698 TGCGTTCTGGTGAGGCTTGGCCATCACCACGTCCTTGAATATCCATGGTCACTGTTCTTG 9757 |||| ||||| | ||||||| ||| |||| ||| || || ||| || ||| | Sbjct 2019 TGCGCCCTGGTCCGCATTGGCCACCACGACGTGCTTCGCTACCCGTGGAGCCTCTTCCTC 2078 Query 9758 ACCGCGCTGAAGGCTGAATGAAATG---GCTGACGTAAAGATCCGGCTGACCGCTGACCT 9814 | |||||||||||||||| ||||| |||| | || ||||||||| || || || Sbjct 2079 AACGCGCTGAAGGCTGAA--AAATGACAACTGAAATTGAGTTCCGGCTGAAGGCCGATCT 2136 Query 9815 CGATGATGCGCTGCGCGAGGTGTCAGGCTTCCGCAAGGAATATGCCGAACTAGT 9868 ||| |||| || ||||| |||||||||| ||||| ||||| || || || Sbjct 2137 CGACTCTGCGGTGAAAGAGGTTGCAGGCTTCCGTAAGGAGTATGCGGAGCTCGT 2190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125285096860978